RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W YOR338WQ99326 363 aa2.92□□□□□ -1.94
USE1YGL098W FIG2P25653 1609 aa2.91□□□□□ -1.94
USE1YGL098W DED1P06634 604 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W HIP1P06775 603 aa2.91□□□□□ -1.94
USE1YGL098W ADK1P07170 222 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W NOP1P15646 327 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W GAS1P22146 559 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W TKL1P23254 680 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W DAD2P36162 133 aa2.91□□□□□ -1.94
USE1YGL098W CBP4P37267 147 aa2.91□□□□□ -1.94
USE1YGL098W TAE1P38340 232 aa2.91□□□□□ -1.94
USE1YGL098W SLM6P38343 150 aa2.91□□□□□ -1.94
USE1YGL098W DOG2P38773 246 aa2.91□□□□□ -1.94
USE1YGL098W YPT35P38815 214 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W YEA4P40004 342 aa2.91□□□□□ -1.94
USE1YGL098W CDC40P40968 455 aaPredicted RBP2.91□□□□□ -1.94
USE1YGL098W YJR015WP47090 510 aa2.91□□□□□ -1.94
USE1YGL098W MSY1P48527 492 aa2.91□□□□□ -1.94
USE1YGL098W PGA1P53896 198 aa2.91□□□□□ -1.94
USE1YGL098W CCE1Q03702 353 aa2.91□□□□□ -1.94
USE1YGL098W HLR1Q04429 423 aa2.91□□□□□ -1.94
USE1YGL098W HRI1Q05905 244 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W SEI1Q06058 285 aa2.91□□□□□ -1.94
USE1YGL098W YLR036CQ07986 203 aa2.91□□□□□ -1.94
USE1YGL098W DCI1Q08558 271 aa2.91□□□□□ -1.94
USE1YGL098W YDL157CQ12082 118 aa2.91□□□□□ -1.94
USE1YGL098W FCY22Q12119 530 aa2.91□□□□□ -1.94
USE1YGL098W YOR015WQ12169 119 aa2.91□□□□□ -1.94
USE1YGL098W TPT1Q12272 230 aaKnown RBP2.91□□□□□ -1.94
USE1YGL098W YGR161W-CQ3E744 92 aa2.91□□□□□ -1.94
USE1YGL098W YLR361C-AQ3E795 98 aa2.91□□□□□ -1.94
USE1YGL098W FKS1P38631 1876 aaKnown RBP2.9□□□□□ -1.94
USE1YGL098W UBR2Q07963 1872 aa2.9□□□□□ -1.94
USE1YGL098W YPR096CO13587 100 aa2.9□□□□□ -1.95
USE1YGL098W COX5AP00424 153 aa2.9□□□□□ -1.95
USE1YGL098W RPL7AP05737 244 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W CPA1P07258 411 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W CHO1P08456 276 aa2.9□□□□□ -1.95
USE1YGL098W PAU1P0CE88 120 aa2.9□□□□□ -1.95
USE1YGL098W PAU14P0CE89 120 aa2.9□□□□□ -1.95
USE1YGL098W PAU6P0CE90 120 aa2.9□□□□□ -1.95
USE1YGL098W PAU18P0CE91 120 aa2.9□□□□□ -1.95
USE1YGL098W PAU8P0CE92 120 aa2.9□□□□□ -1.95
USE1YGL098W PAU11P0CE93 120 aa2.9□□□□□ -1.95
USE1YGL098W YER190C-BP0CX94 160 aa2.9□□□□□ -1.95
USE1YGL098W YEL077W-AP0CX95 160 aa2.9□□□□□ -1.95
USE1YGL098W YGR296C-BP0CX96 160 aa2.9□□□□□ -1.95
USE1YGL098W YPL283W-BP0CX97 160 aa2.9□□□□□ -1.95
USE1YGL098W YPR204C-AP0CX98 160 aa2.9□□□□□ -1.95
USE1YGL098W URA5P13298 226 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W SPT15P13393 240 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W INO4P13902 151 aa2.9□□□□□ -1.95
USE1YGL098W HYP2P23301 157 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W FEN2P25621 512 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W CWP1P28319 239 aa2.9□□□□□ -1.95
USE1YGL098W TRR1P29509 319 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W PRO1P32264 428 aa2.9□□□□□ -1.95
USE1YGL098W MDH3P32419 343 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
USE1YGL098W ERG24P32462 438 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W TKL2P33315 681 aa2.9□□□□□ -1.95
USE1YGL098W DUT1P33317 147 aa2.9□□□□□ -1.95
USE1YGL098W MTR2P34232 184 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W MCH2P36032 473 aa2.9□□□□□ -1.95
USE1YGL098W MRPL24P36525 258 aaPredicted RBP2.9□□□□□ -1.95
USE1YGL098W MRPL27P36526 146 aaPredicted RBP2.9□□□□□ -1.95
USE1YGL098W NTC20P38302 140 aaPredicted RBP2.9□□□□□ -1.95
USE1YGL098W PAU13P38725 120 aa2.9□□□□□ -1.95
USE1YGL098W YHR127WP38833 243 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W YHR130CP38834 111 aa2.9□□□□□ -1.95
USE1YGL098W SHO1P40073 367 aa2.9□□□□□ -1.95
USE1YGL098W SEC24P40482 926 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W MSL1P40567 111 aaPredicted RBP2.9□□□□□ -1.95
USE1YGL098W YPS6P40583 537 aa2.9□□□□□ -1.95
USE1YGL098W RPN11P43588 306 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W YJL163CP46996 555 aa2.9□□□□□ -1.95
USE1YGL098W YJR120WP47157 116 aa2.9□□□□□ -1.95
USE1YGL098W BAT2P47176 376 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W PMT3P47190 753 aa2.9□□□□□ -1.95
USE1YGL098W UBP8P50102 471 aa2.9□□□□□ -1.95
USE1YGL098W YIP4P53093 235 aa2.9□□□□□ -1.95
USE1YGL098W ERG26P53199 349 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W YGR117CP53270 476 aa2.9□□□□□ -1.95
USE1YGL098W PAU4P53427 120 aa2.9□□□□□ -1.95
USE1YGL098W TEX1P53851 422 aaKnown RBP2.9□□□□□ -1.95
USE1YGL098W ATG4P53867 494 aa2.9□□□□□ -1.95
USE1YGL098W PAU10Q03050 120 aa2.9□□□□□ -1.95
USE1YGL098W CAB5Q03941 241 aa2.9□□□□□ -1.95
USE1YGL098W SCW10Q04951 389 aa2.9□□□□□ -1.95
USE1YGL098W ASM4Q05166 528 aa2.9□□□□□ -1.95
USE1YGL098W COQ11Q05892 277 aa2.9□□□□□ -1.95
USE1YGL098W PAU20Q08322 120 aa2.9□□□□□ -1.95
USE1YGL098W YPL162CQ12042 273 aa2.9□□□□□ -1.95
USE1YGL098W PIN2Q12057 282 aa2.9□□□□□ -1.95
USE1YGL098W MCP1Q12106 302 aa2.9□□□□□ -1.95
USE1YGL098W RKI1Q12189 258 aa2.9□□□□□ -1.95
USE1YGL098W SME1Q12330 94 aaPredicted RBP2.9□□□□□ -1.95
USE1YGL098W ZPS1Q12512 249 aa2.9□□□□□ -1.95
USE1YGL098W YLR363W-AQ3E747 85 aa2.9□□□□□ -1.95
USE1YGL098W PAU9Q3E770 120 aa2.9□□□□□ -1.95
USE1YGL098W ADH1P00330 348 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 104.7 ms