RNA–Protein interactions for RNA: YFL028C

CAF16, Transcript of Part of evolutionarily-conserved CCR4-NOT regulatory complex, yeast

Gene CAF16, Length 870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	YFL028C	SEC13	Q04491	297 aa	Known RBP	3.73	□□□□□ -1.81
CAF16	YFL028C	SPO77	Q06134	477 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	CTR3	Q06686	241 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	RAX2	Q12465	1220 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	YAK1	P14680	807 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	NTG1	P31378	399 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	SUA5	P32579	426 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	YOR062C	P36025	268 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	RRT13	P40042	185 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	DDI1	P40087	428 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	YGR201C	P42936	225 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	TIM21	P53220	239 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	COS6	P53344	381 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	YLR152C	P54072	576 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	SWP1	Q02795	286 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	SRL4	Q03085	281 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	SEI1	Q06058	285 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	MCH1	Q07376	486 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	SDO1	Q07953	250 aa	Known RBP	3.72	□□□□□ -1.81
CAF16	YFL028C	YOL024W	Q08172	172 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	PSF1	Q12488	208 aa		3.72	□□□□□ -1.81
CAF16	YFL028C	PBN1	P25580	416 aa		3.71	□□□□□ -1.82
CAF16	YFL028C	GDH2	P33327	1092 aa	Known RBP	3.71	□□□□□ -1.82
CAF16	YFL028C	AST1	P35183	429 aa		3.71	□□□□□ -1.82
CAF16	YFL028C	PRS4	P38063	326 aa	Predicted RBP	3.71	□□□□□ -1.82
CAF16	YFL028C	SYF2	P53277	215 aa	Predicted RBP	3.71	□□□□□ -1.82
CAF16	YFL028C	YLR460C	P54007	376 aa		3.71	□□□□□ -1.82
CAF16	YFL028C	NCE101	Q02820	53 aa		3.71	□□□□□ -1.82
CAF16	YFL028C	KRE28	Q04431	385 aa		3.71	□□□□□ -1.82
CAF16	YFL028C	YDL211C	Q12121	372 aa		3.71	□□□□□ -1.82
CAF16	YFL028C	ATG31	Q12421	196 aa		3.71	□□□□□ -1.82
CAF16	YFL028C	PET494	P07390	489 aa	Predicted RBP	3.7	□□□□□ -1.82
CAF16	YFL028C	SNF4	P12904	322 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	KSS1	P14681	368 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	YCR102C	P25608	368 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.7	□□□□□ -1.82	not detected
CAF16	YFL028C	MSN4	P33749	630 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	NUF2	P33895	451 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	FRM2	P37261	193 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	ECM34	P38728	170 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	FMC1	P40491	155 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	ILM1	P47155	203 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	YML018C	Q03730	393 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	UTP15	Q04305	513 aa	Known RBP	3.7	□□□□□ -1.82
CAF16	YFL028C	YOR342C	Q12182	319 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	MRX4	Q12467	430 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	YAL067W-A	Q8TGK6	75 aa		3.7	□□□□□ -1.82
CAF16	YFL028C	PET9	P18239	318 aa	Known RBP	3.69	□□□□□ -1.82
CAF16	YFL028C	YCR025C	P25352	136 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	YCR016W	P25617	290 aa	Known RBP	3.69	□□□□□ -1.82
CAF16	YFL028C	UBC8	P28263	218 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	HSP150	P32478	413 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	NSG1	P38837	291 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	AST2	P39945	430 aa	Known RBP	3.69	□□□□□ -1.82
CAF16	YFL028C	YIL012W	P40551	113 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	NUP57	P48837	541 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	MPC1	P53157	130 aa	Known RBP	3.69	□□□□□ -1.82
CAF16	YFL028C	YDR209C	Q03480	137 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	RNH202	Q05635	350 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	PAM18	Q07914	168 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	MDM32	Q12171	622 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	YOR214C	Q12282	236 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	TRA1	P38811	3744 aa		3.69	□□□□□ -1.82
CAF16	YFL028C	YOL163W	P0CF20	169 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	IMP1	P28627	190 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	ZRT3	P34240	503 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	MBA1	P38300	278 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	PRS2	P38620	318 aa	Known RBP	3.68	□□□□□ -1.82
CAF16	YFL028C	RRG9	P40156	214 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	PRE6	P40303	254 aa	Known RBP	3.68	□□□□□ -1.82
CAF16	YFL028C	PHB1	P40961	287 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	YJR012C	P47087	207 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	MNT4	P53745	580 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	CGI121	Q03705	181 aa	Known RBP	3.68	□□□□□ -1.82
CAF16	YFL028C	GRX3	Q03835	250 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	TSA2	Q04120	196 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.68	□□□□□ -1.82	not detected
CAF16	YFL028C	BRX1	Q08235	291 aa	Known RBP	3.68	□□□□□ -1.82
CAF16	YFL028C	MSH5	Q12175	901 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	YLR126C	Q12288	251 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	YOS9	Q99220	542 aa		3.68	□□□□□ -1.82
CAF16	YFL028C	ADH1	P00330	348 aa	Known RBP	3.67	□□□□□ -1.82
CAF16	YFL028C	RHO1	P06780	209 aa	Known RBP	3.67	□□□□□ -1.82
CAF16	YFL028C	FBA1	P14540	359 aa	Known RBP	3.67	□□□□□ -1.82
CAF16	YFL028C	RAD51	P25454	400 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	ARC19	P33204	171 aa	Known RBP	3.67	□□□□□ -1.82
CAF16	YFL028C	YOX1	P34161	385 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.67	□□□□□ -1.82	not detected
CAF16	YFL028C	SEN34	P39707	275 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	KRE29	P40026	464 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	SPO73	P40031	143 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	THO1	P40040	218 aa	Known RBP	3.67	□□□□□ -1.82
CAF16	YFL028C	YER085C	P40058	173 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	AVT7	P40501	490 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	YFR054C	P43622	192 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	RPE1	P46969	238 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	PRM8	P53174	237 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	YGR018C	P53211	109 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	MRPL50	P53724	139 aa		3.67	□□□□□ -1.82
CAF16	YFL028C	DCR2	Q05924	578 aa		3.67	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms