RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C URA10P30402 227 aa0.96□□□□□ -2.26
SEC3YER008C MDH3P32419 343 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
SEC3YER008C AEP1P32493 518 aa0.96□□□□□ -2.26
SEC3YER008C ZRT3P34240 503 aa0.96□□□□□ -2.26
SEC3YER008C CSG2P35206 410 aa0.96□□□□□ -2.26
SEC3YER008C MRPL28P36527 147 aa0.96□□□□□ -2.26
SEC3YER008C PEX17P40155 199 aa0.96□□□□□ -2.26
SEC3YER008C MIC26P50087 233 aa0.96□□□□□ -2.26
SEC3YER008C PRM8P53174 237 aa0.96□□□□□ -2.26
SEC3YER008C VHS1Q03785 461 aa0.96□□□□□ -2.26
SEC3YER008C YMR027WQ04371 470 aa0.96□□□□□ -2.26
SEC3YER008C TAF9Q05027 157 aa0.96□□□□□ -2.26
SEC3YER008C RFU1Q08003 200 aa0.96□□□□□ -2.26
SEC3YER008C YOR186WQ08560 144 aa0.96□□□□□ -2.26
SEC3YER008C SNU23Q12368 194 aaPredicted RBP0.96□□□□□ -2.26
SEC3YER008C PRM4Q12498 284 aa0.96□□□□□ -2.26
SEC3YER008C YBR056W-AI2HB52 66 aa0.95□□□□□ -2.26
SEC3YER008C GCN3P14741 305 aa0.95□□□□□ -2.26
SEC3YER008C BGL2P15703 313 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C CLG1P35190 452 aa0.95□□□□□ -2.26
SEC3YER008C CAT5P41735 233 aa0.95□□□□□ -2.26
SEC3YER008C COS10P52924 374 aa0.95□□□□□ -2.26
SEC3YER008C PRM6Q04705 352 aa0.95□□□□□ -2.26
SEC3YER008C YMR315WQ04869 349 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C YMR230W-AQ3E7B5 62 aa0.95□□□□□ -2.26
SEC3YER008C YBL008W-AQ3E821 79 aa0.95□□□□□ -2.26
SEC3YER008C BCY1P07278 416 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C DPM1P14020 267 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C GRX2P17695 143 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C CYC2P38909 366 aa0.95□□□□□ -2.26
SEC3YER008C YMR144WP40214 342 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C SOK1P40317 901 aa0.95□□□□□ -2.26
SEC3YER008C YGR015CP53208 328 aa0.95□□□□□ -2.26
SEC3YER008C HSK3P69852 69 aa0.95□□□□□ -2.26
SEC3YER008C IRC25Q07951 179 aa0.95□□□□□ -2.26
SEC3YER008C YOL024WQ08172 172 aa0.95□□□□□ -2.26
SEC3YER008C RRP40Q08285 240 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C TIM22Q12328 207 aa0.95□□□□□ -2.26
SEC3YER008C LDB16P25587 256 aa0.95□□□□□ -2.26
SEC3YER008C OM14P38325 134 aa0.95□□□□□ -2.26
SEC3YER008C YGP1P38616 354 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C FMP32P43557 207 aa0.95□□□□□ -2.26
SEC3YER008C PRP24P49960 444 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C CLD1P53264 445 aa0.95□□□□□ -2.26
SEC3YER008C FYV6P53913 173 aa0.95□□□□□ -2.26
SEC3YER008C ELP3Q02908 557 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C ERP1Q05359 219 aaKnown RBP0.95□□□□□ -2.26
SEC3YER008C YAL067W-AQ8TGK6 75 aa0.95□□□□□ -2.26
SEC3YER008C NUM1Q00402 2748 aa0.94□□□□□ -2.26
SEC3YER008C DRE2P36152 348 aa0.94□□□□□ -2.26
SEC3YER008C FZO1P38297 855 aa0.94□□□□□ -2.26
SEC3YER008C UBC12P52491 188 aa0.94□□□□□ -2.26
SEC3YER008C YGL039WP53183 348 aaKnown RBP0.94□□□□□ -2.26
SEC3YER008C MPA43P53583 542 aaPredicted RBP0.94□□□□□ -2.26
SEC3YER008C PEX12Q04370 399 aa0.94□□□□□ -2.26
SEC3YER008C FYV12Q08559 129 aa0.94□□□□□ -2.26
SEC3YER008C TRR1P29509 319 aaKnown RBP0.94□□□□□ -2.26
SEC3YER008C ERG24P32462 438 aaKnown RBP0.94□□□□□ -2.26
SEC3YER008C YEL045CP32616 141 aa0.94□□□□□ -2.26
SEC3YER008C DOG1P38774 246 aa0.94□□□□□ -2.26
SEC3YER008C MTW1P39731 289 aa0.94□□□□□ -2.26
SEC3YER008C EDC3P39998 551 aaKnown RBP0.94□□□□□ -2.26
SEC3YER008C EDC2P40023 145 aaPredicted RBP0.94□□□□□ -2.26
SEC3YER008C YJL028WP47062 111 aa0.94□□□□□ -2.26
SEC3YER008C SWT21P53873 357 aaPredicted RBP0.94□□□□□ -2.26
SEC3YER008C IMP4P53941 290 aaKnown RBP0.94□□□□□ -2.26
SEC3YER008C YET2Q04210 160 aa0.94□□□□□ -2.26
SEC3YER008C HCR1Q05775 265 aaKnown RBP0.94□□□□□ -2.26
SEC3YER008C PEX11Q12462 236 aa0.94□□□□□ -2.26
SEC3YER008C NOT5Q12514 560 aaPredicted RBP0.94□□□□□ -2.26
SEC3YER008C YPR170W-BP0C5R9 85 aa0.94□□□□□ -2.26
SEC3YER008C UTH1P36135 365 aa0.94□□□□□ -2.26
SEC3YER008C ECM14P38836 430 aa0.94□□□□□ -2.26
SEC3YER008C BRR6P53062 197 aa0.94□□□□□ -2.26
SEC3YER008C MDM34P53083 459 aa0.94□□□□□ -2.26
SEC3YER008C SDS23P53172 527 aa0.94□□□□□ -2.26
SEC3YER008C JAC1P53193 184 aa0.94□□□□□ -2.26
SEC3YER008C YNL184CP53876 108 aa0.94□□□□□ -2.26
SEC3YER008C ECM11Q04110 302 aa0.94□□□□□ -2.26
SEC3YER008C API2Q04413 109 aa0.94□□□□□ -2.26
SEC3YER008C YMR321CQ04898 105 aa0.94□□□□□ -2.26
SEC3YER008C SPC2Q04969 178 aa0.94□□□□□ -2.26
SEC3YER008C ECM19Q06011 112 aa0.94□□□□□ -2.26
SEC3YER008C YLR030WQ07967 263 aa0.94□□□□□ -2.26
SEC3YER008C ATG5Q12380 294 aa0.94□□□□□ -2.26
SEC3YER008C TRM10Q12400 293 aa0.94□□□□□ -2.26
SEC3YER008C TDA8Q6B2U8 126 aa0.94□□□□□ -2.26
SEC3YER008C SIR2P06700 562 aa0.93□□□□□ -2.26
SEC3YER008C COX10P21592 462 aa0.93□□□□□ -2.26
SEC3YER008C CAM1P29547 415 aaKnown RBP0.93□□□□□ -2.26
SEC3YER008C BDH1P39714 382 aa0.93□□□□□ -2.26
SEC3YER008C MCM22P47167 239 aa0.93□□□□□ -2.26
SEC3YER008C YMR279CQ03263 540 aa0.93□□□□□ -2.26
SEC3YER008C YTH1Q06102 208 aaPredicted RBP0.93□□□□□ -2.26
SEC3YER008C YDL211CQ12121 372 aa0.93□□□□□ -2.26
SEC3YER008C YPS3Q12303 508 aa0.93□□□□□ -2.26
SEC3YER008C YBR298C-AQ8TGK4 73 aa0.93□□□□□ -2.26
SEC3YER008C RPL2AP0CX45 254 aaKnown RBP0.93□□□□□ -2.26
SEC3YER008C RPL2BP0CX46 254 aaKnown RBP0.93□□□□□ -2.26
SEC3YER008C ERD2P18414 219 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 76.3 ms