RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeastyeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOM1YDR457W RCE1Q03530 315 aa2.51□□□□□ -2.01
TOM1YDR457W SEI1Q06058 285 aa2.51□□□□□ -2.01
TOM1YDR457W CDD1Q06549 142 aa2.51□□□□□ -2.01
TOM1YDR457W RDL2Q08742 149 aaKnown RBP2.51□□□□□ -2.01
TOM1YDR457W RPL11BQ3E757 174 aaPredicted RBP2.51□□□□□ -2.01
TOM1YDR457W TCM62P38228 572 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W HRB1P38922 454 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
TOM1YDR457W BDH1P39714 382 aa2.5□□□□□ -2.01
TOM1YDR457W URM1P40554 99 aaPredicted RBP2.5□□□□□ -2.01
TOM1YDR457W SSU1P41930 458 aa2.5□□□□□ -2.01
TOM1YDR457W ATP23P53722 227 aa2.5□□□□□ -2.01
TOM1YDR457W YMR253CQ04835 414 aa2.5□□□□□ -2.01
TOM1YDR457W RAF1Q06891 181 aa2.5□□□□□ -2.01
TOM1YDR457W YPR014CQ6B0W2 109 aa2.5□□□□□ -2.01
TOM1YDR457W TDH1P00360 332 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W RPS4AP0CX35 261 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W RPS4BP0CX36 261 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W NNK1P36003 928 aa2.5□□□□□ -2.01
TOM1YDR457W SAF1P38352 637 aa2.5□□□□□ -2.01
TOM1YDR457W VPS29P38759 282 aa2.5□□□□□ -2.01
TOM1YDR457W SNT309Q06091 175 aaPredicted RBP2.5□□□□□ -2.01
TOM1YDR457W UTP23Q12339 254 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W SCO2P38072 301 aa2.5□□□□□ -2.01
TOM1YDR457W TRS23Q03784 219 aa2.5□□□□□ -2.01
TOM1YDR457W REX3Q12090 404 aa2.5□□□□□ -2.01
TOM1YDR457W MMS21P38632 267 aa2.5□□□□□ -2.01
TOM1YDR457W YCK3P39962 524 aa2.5□□□□□ -2.01
TOM1YDR457W AGE2P40529 298 aa2.5□□□□□ -2.01
TOM1YDR457W TAD2P47058 250 aa2.5□□□□□ -2.01
TOM1YDR457W YTH1Q06102 208 aaPredicted RBP2.5□□□□□ -2.01
TOM1YDR457W ARR3Q06598 404 aa2.5□□□□□ -2.01
TOM1YDR457W GEP5Q12393 293 aa2.5□□□□□ -2.01
TOM1YDR457W RKR1Q04781 1562 aa2.5□□□□□ -2.01
TOM1YDR457W RPL3P14126 387 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W QCR9P22289 66 aa2.5□□□□□ -2.01
TOM1YDR457W YKR073CP36153 106 aa2.5□□□□□ -2.01
TOM1YDR457W YIL059CP40520 121 aa2.5□□□□□ -2.01
TOM1YDR457W YFL012WP43580 148 aa2.5□□□□□ -2.01
TOM1YDR457W PAU4P53427 120 aa2.5□□□□□ -2.01
TOM1YDR457W WSC2P53832 503 aa2.5□□□□□ -2.01
TOM1YDR457W GRX5Q02784 150 aa2.5□□□□□ -2.01
TOM1YDR457W YOR186WQ08560 144 aa2.5□□□□□ -2.01
TOM1YDR457W YUH1P35127 236 aa2.5□□□□□ -2.01
TOM1YDR457W YIR016WP40572 265 aa2.5□□□□□ -2.01
TOM1YDR457W CAX4P53223 239 aa2.5□□□□□ -2.01
TOM1YDR457W PBA1Q05778 276 aa2.5□□□□□ -2.01
TOM1YDR457W SPO24Q3E752 67 aa2.5□□□□□ -2.01
TOM1YDR457W RPS21AP0C0V8 87 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W PEX17P40155 199 aa2.5□□□□□ -2.01
TOM1YDR457W GRH1Q04410 372 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W CST9Q06032 482 aa2.5□□□□□ -2.01
TOM1YDR457W PIN3Q06449 215 aa2.5□□□□□ -2.01
TOM1YDR457W ORT1Q12375 292 aa2.5□□□□□ -2.01
TOM1YDR457W RPS21BQ3E754 87 aaKnown RBP2.5□□□□□ -2.01
TOM1YDR457W MCH2P36032 473 aa2.5□□□□□ -2.01
TOM1YDR457W CBT1P36038 271 aaPredicted RBP2.5□□□□□ -2.01
TOM1YDR457W YBR096WP38256 230 aa2.5□□□□□ -2.01
TOM1YDR457W YJR012CP47087 207 aa2.5□□□□□ -2.01
TOM1YDR457W YJR015WP47090 510 aa2.5□□□□□ -2.01
TOM1YDR457W FCF1Q05498 189 aaPredicted RBP2.5□□□□□ -2.01
TOM1YDR457W YPL162CQ12042 273 aa2.5□□□□□ -2.01
TOM1YDR457W YIL134C-AQ45U18 67 aa2.5□□□□□ -2.01
TOM1YDR457W ERG2P32352 222 aa2.49□□□□□ -2.01
TOM1YDR457W YGL117WP53133 265 aa2.49□□□□□ -2.01
TOM1YDR457W RFU1Q08003 200 aa2.49□□□□□ -2.01
TOM1YDR457W FOL3Q12676 427 aaPredicted RBP2.49□□□□□ -2.01
TOM1YDR457W CTA1P15202 515 aa2.49□□□□□ -2.01
TOM1YDR457W RPD3P32561 433 aa2.49□□□□□ -2.01
TOM1YDR457W YIL102CP40488 101 aa2.49□□□□□ -2.01
TOM1YDR457W SPC1P46965 94 aa2.49□□□□□ -2.01
TOM1YDR457W MSO1P53604 210 aaKnown RBP2.49□□□□□ -2.01
TOM1YDR457W AAT1Q01802 451 aa2.49□□□□□ -2.01
TOM1YDR457W LEE1Q02799 301 aaKnown RBP2.49□□□□□ -2.01
TOM1YDR457W UPS3Q04006 179 aa2.49□□□□□ -2.01
TOM1YDR457W MRL1Q06815 381 aa2.49□□□□□ -2.01
TOM1YDR457W MIM1Q08176 113 aa2.49□□□□□ -2.01
TOM1YDR457W RAD28Q12021 506 aa2.49□□□□□ -2.01
TOM1YDR457W WHI5Q12416 295 aa2.49□□□□□ -2.01
TOM1YDR457W RPS17AP02407 136 aaKnown RBP2.49□□□□□ -2.01
TOM1YDR457W RPS17BP14127 136 aaKnown RBP2.49□□□□□ -2.01
TOM1YDR457W RTG1P32607 177 aa2.49□□□□□ -2.01
TOM1YDR457W BCK2P33306 851 aa2.49□□□□□ -2.01
TOM1YDR457W MRPL24P36525 258 aaPredicted RBP2.49□□□□□ -2.01
TOM1YDR457W AGP2P38090 596 aa2.49□□□□□ -2.01
TOM1YDR457W DER1P38307 211 aa2.49□□□□□ -2.01
TOM1YDR457W YIA6P40556 373 aa2.49□□□□□ -2.01
TOM1YDR457W ABM1P47146 123 aa2.49□□□□□ -2.01
TOM1YDR457W YIP4P53093 235 aa2.49□□□□□ -2.01
TOM1YDR457W YDR042CQ03205 200 aa2.49□□□□□ -2.01
TOM1YDR457W UPS1Q05776 175 aa2.49□□□□□ -2.01
TOM1YDR457W THI72Q08579 599 aa2.49□□□□□ -2.01
TOM1YDR457W SGA1P08019 549 aa2.49□□□□□ -2.01
TOM1YDR457W RME1P32338 300 aaKnown RBP2.49□□□□□ -2.01
TOM1YDR457W YBR197CP38306 217 aa2.49□□□□□ -2.01
TOM1YDR457W RRP4P38792 359 aaKnown RBP2.49□□□□□ -2.01
TOM1YDR457W DFG10P40526 253 aa2.49□□□□□ -2.01
TOM1YDR457W CFD1P40558 293 aa2.49□□□□□ -2.01
TOM1YDR457W MIC27P50945 234 aa2.49□□□□□ -2.01
TOM1YDR457W DAD4P69851 72 aa2.49□□□□□ -2.01
TOM1YDR457W FIT3Q08907 204 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 129.5 ms