RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W SWD3P38123 315 aa2.11□□□□□ -2.07
SNX41YDR425W RIB5P38145 238 aa2.11□□□□□ -2.07
SNX41YDR425W YPT31P38555 223 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W YEL073CP39974 107 aa2.11□□□□□ -2.07
SNX41YDR425W PAU15P40585 124 aa2.11□□□□□ -2.07
SNX41YDR425W YJR012CP47087 207 aa2.11□□□□□ -2.07
SNX41YDR425W OST3P48439 350 aa2.11□□□□□ -2.07
SNX41YDR425W YGR015CP53208 328 aa2.11□□□□□ -2.07
SNX41YDR425W TRM112P53738 135 aaPredicted RBP2.11□□□□□ -2.07
SNX41YDR425W YNL143CP53908 130 aa2.11□□□□□ -2.07
SNX41YDR425W YLR152CP54072 576 aa2.11□□□□□ -2.07
SNX41YDR425W BUD25P85052 153 aa2.11□□□□□ -2.07
SNX41YDR425W TIM10P87108 93 aa2.11□□□□□ -2.07
SNX41YDR425W SPC19Q03954 165 aa2.11□□□□□ -2.07
SNX41YDR425W SHH3Q04487 196 aa2.11□□□□□ -2.07
SNX41YDR425W PEX30Q06169 523 aa2.11□□□□□ -2.07
SNX41YDR425W YOR385WQ08909 290 aa2.11□□□□□ -2.07
SNX41YDR425W FDH1Q08911 376 aa2.11□□□□□ -2.07
SNX41YDR425W FCF2Q12035 217 aaPredicted RBP2.11□□□□□ -2.07
SNX41YDR425W SKS1Q12505 502 aa2.11□□□□□ -2.07
SNX41YDR425W COA6Q3E846 104 aa2.11□□□□□ -2.07
SNX41YDR425W PMD1P32634 1753 aa2.11□□□□□ -2.07
SNX41YDR425W QCR7P00128 127 aa2.11□□□□□ -2.07
SNX41YDR425W TPI1P00942 248 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W SGA1P08019 549 aa2.11□□□□□ -2.07
SNX41YDR425W ATP5P09457 212 aa2.11□□□□□ -2.07
SNX41YDR425W URA6P15700 204 aa2.11□□□□□ -2.07
SNX41YDR425W PDX1P16451 410 aa2.11□□□□□ -2.07
SNX41YDR425W RNA15P25299 296 aaPredicted RBP2.11□□□□□ -2.07
SNX41YDR425W TRX3P25372 127 aa2.11□□□□□ -2.07
SNX41YDR425W MKK1P32490 508 aa2.11□□□□□ -2.07
SNX41YDR425W SPS19P32573 292 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W CSE2P33308 149 aa2.11□□□□□ -2.07
SNX41YDR425W PAN3P36102 679 aaPredicted RBP2.11□□□□□ -2.07
SNX41YDR425W AIM29P36154 155 aa2.11□□□□□ -2.07
SNX41YDR425W SHE3P38272 425 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W GPI16P38875 610 aa2.11□□□□□ -2.07
SNX41YDR425W MOB2P43563 287 aa2.11□□□□□ -2.07
SNX41YDR425W RPA34P47006 233 aaPredicted RBP2.11□□□□□ -2.07
SNX41YDR425W YGR149WP48236 432 aa2.11□□□□□ -2.07
SNX41YDR425W BNS1P50084 137 aa2.11□□□□□ -2.07
SNX41YDR425W YIP1P53039 248 aa2.11□□□□□ -2.07
SNX41YDR425W PNC1P53184 216 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W SLX9P53251 210 aaPredicted RBP2.11□□□□□ -2.07
SNX41YDR425W YNL260CP53846 198 aa2.11□□□□□ -2.07
SNX41YDR425W APJ1P53940 528 aa2.11□□□□□ -2.07
SNX41YDR425W MTQ1P53944 314 aa2.11□□□□□ -2.07
SNX41YDR425W YPL067CQ02754 198 aa2.11□□□□□ -2.07
SNX41YDR425W YDC1Q02896 317 aa2.11□□□□□ -2.07
SNX41YDR425W RSM10Q03201 203 aa2.11□□□□□ -2.07
SNX41YDR425W AVO2Q04749 426 aa2.11□□□□□ -2.07
SNX41YDR425W BOP2Q06150 570 aa2.11□□□□□ -2.07
SNX41YDR425W FRQ1Q06389 190 aa2.11□□□□□ -2.07
SNX41YDR425W REX4Q08237 289 aa2.11□□□□□ -2.07
SNX41YDR425W POM33Q12164 279 aa2.11□□□□□ -2.07
SNX41YDR425W YPR011CQ12251 326 aa2.11□□□□□ -2.07
SNX41YDR425W YDL085C-AQ3E7B7 68 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W ADH2P00331 348 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W TDH2P00358 332 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W RPS25BP0C0T4 108 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W YOL162WP0CF19 215 aa2.1□□□□□ -2.07
SNX41YDR425W SCH9P11792 824 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W SPO7P18410 259 aa2.1□□□□□ -2.07
SNX41YDR425W PRE1P22141 198 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W SLM5P25345 492 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W PBN1P25580 416 aa2.1□□□□□ -2.07
SNX41YDR425W POP5P28005 173 aa2.1□□□□□ -2.07
SNX41YDR425W AFG1P32317 509 aa2.1□□□□□ -2.07
SNX41YDR425W TKL2P33315 681 aa2.1□□□□□ -2.07
SNX41YDR425W YCR041WP37265 110 aa2.1□□□□□ -2.07
SNX41YDR425W YBR096WP38256 230 aa2.1□□□□□ -2.07
SNX41YDR425W PRP39P39682 629 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W PRM5P40476 318 aa2.1□□□□□ -2.07
SNX41YDR425W CIN5P40917 295 aa2.1□□□□□ -2.07
SNX41YDR425W OST1P41543 476 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W SYS1P41544 203 aa2.1□□□□□ -2.07
SNX41YDR425W OTU1P43558 301 aa2.1□□□□□ -2.07
SNX41YDR425W UFD1P53044 361 aa2.1□□□□□ -2.07
SNX41YDR425W MGA1P53050 456 aa2.1□□□□□ -2.07
SNX41YDR425W NSA1P53136 463 aaPredicted RBP2.1□□□□□ -2.07
SNX41YDR425W ACT1P60010 375 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W PKR1Q03880 122 aaKnown RBP2.1□□□□□ -2.07
SNX41YDR425W ATC1Q04005 294 aa2.1□□□□□ -2.07
SNX41YDR425W CTR3Q06686 241 aa2.1□□□□□ -2.07
SNX41YDR425W HEM25Q07534 307 aa2.1□□□□□ -2.07
SNX41YDR425W RFU1Q08003 200 aa2.1□□□□□ -2.07
SNX41YDR425W CSI2Q08054 341 aa2.1□□□□□ -2.07
SNX41YDR425W ATG5Q12380 294 aa2.1□□□□□ -2.07
SNX41YDR425W YLR146W-AQ2V2P1 62 aa2.1□□□□□ -2.07
SNX41YDR425W COX19Q3E731 98 aa2.1□□□□□ -2.07
SNX41YDR425W RPS25AQ3E792 108 aaPredicted RBP2.1□□□□□ -2.07
SNX41YDR425W ODC2Q99297 307 aa2.1□□□□□ -2.07
SNX41YDR425W YOR338WQ99326 363 aa2.1□□□□□ -2.07
SNX41YDR425W UBR2Q07963 1872 aa2.1□□□□□ -2.07
SNX41YDR425W HAP3P13434 144 aa2.09□□□□□ -2.07
SNX41YDR425W REC114P32841 428 aa2.09□□□□□ -2.07
SNX41YDR425W PRP18P33411 251 aaPredicted RBP2.09□□□□□ -2.07
SNX41YDR425W YPC1P38298 316 aa2.09□□□□□ -2.07
SNX41YDR425W TRR2P38816 342 aa2.09□□□□□ -2.07
SNX41YDR425W MTC6P38849 526 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms