RNA–Protein interactions for RNA: YDR401W

YDR401W, Transcript of Dubious open reading frame, yeast

Gene YDR401W, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR401W	YDR401W	PET54	P10834	293 aa		4.69	□□□□□ -1.66
YDR401W	YDR401W	SNF4	P12904	322 aa		4.69	□□□□□ -1.66
YDR401W	YDR401W	FCY2	P17064	533 aa		4.69	□□□□□ -1.66
YDR401W	YDR401W	SEC14	P24280	304 aa	Known RBP	4.69	□□□□□ -1.66
YDR401W	YDR401W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
YDR401W	YDR401W	GIM4	P40005	111 aa	Known RBP	4.69	□□□□□ -1.66
YDR401W	YDR401W	YPI1	P43587	155 aa		4.69	□□□□□ -1.66
YDR401W	YDR401W	LPP1	Q04396	274 aa		4.69	□□□□□ -1.66
YDR401W	YDR401W	BBP1	Q12365	385 aa		4.69	□□□□□ -1.66
YDR401W	YDR401W	YOR020W-A	Q3E824	90 aa		4.69	□□□□□ -1.66
YDR401W	YDR401W	AHC2	P25649	128 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	RNP1	P32385	249 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	BDH1	P39714	382 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	GLE2	P40066	365 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	UFE1	P41834	346 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	COG5	P53951	403 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	MAK3	Q03503	176 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	SMT3	Q12306	101 aa	Known RBP	4.68	□□□□□ -1.66
YDR401W	YDR401W	ISD11	Q6Q560	94 aa		4.68	□□□□□ -1.66
YDR401W	YDR401W	MBF1	O14467	151 aa	Known RBP	4.67	□□□□□ -1.66
YDR401W	YDR401W	YCR023C	P25351	611 aa		4.67	□□□□□ -1.66
YDR401W	YDR401W	TRM7	P38238	310 aa	Known RBP	4.67	□□□□□ -1.66
YDR401W	YDR401W	RPF1	P38805	295 aa	Known RBP	4.67	□□□□□ -1.66
YDR401W	YDR401W	IRC22	P40006	225 aa		4.67	□□□□□ -1.66
YDR401W	YDR401W	FMP32	P43557	207 aa		4.67	□□□□□ -1.66
YDR401W	YDR401W	HNT1	Q04344	158 aa	Known RBP	4.67	□□□□□ -1.66
YDR401W	YDR401W	SHH4	Q06236	168 aa		4.67	□□□□□ -1.66
YDR401W	YDR401W	YPL162C	Q12042	273 aa		4.67	□□□□□ -1.66
YDR401W	YDR401W	MAG1	P22134	296 aa	Known RBP	4.66	□□□□□ -1.66
YDR401W	YDR401W	YBR063C	P38083	404 aa		4.66	□□□□□ -1.66
YDR401W	YDR401W	RPA43	P46669	326 aa		4.66	□□□□□ -1.66
YDR401W	YDR401W	MPA43	P53583	542 aa	Predicted RBP	4.66	□□□□□ -1.66
YDR401W	YDR401W	IMP4	P53941	290 aa	Known RBP	4.66	□□□□□ -1.66
YDR401W	YDR401W	NOT5	Q12514	560 aa	Predicted RBP	4.66	□□□□□ -1.66
YDR401W	YDR401W	YFR032C-B	Q8TGU2	87 aa		4.66	□□□□□ -1.66
YDR401W	YDR401W	AUS1	Q08409	1394 aa		4.65	□□□□□ -1.66
YDR401W	YDR401W	ATG22	P25568	528 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	BUB2	P26448	306 aa	Predicted RBP	4.65	□□□□□ -1.67
YDR401W	YDR401W	RCN1	P36054	211 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	YAR068W	P39564	161 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	RSM27	P53305	110 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	COS6	P53344	381 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	YNL010W	P53981	241 aa	Known RBP	4.65	□□□□□ -1.67
YDR401W	YDR401W	DID2	P69771	204 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	YLR031W	Q07978	186 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	GEP5	Q12393	293 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	MHT1	Q12525	324 aa		4.65	□□□□□ -1.67
YDR401W	YDR401W	YGP1	P38616	354 aa	Known RBP	4.64	□□□□□ -1.67
YDR401W	YDR401W	ARO8	P53090	500 aa	Known RBP	4.64	□□□□□ -1.67
YDR401W	YDR401W	HSK3	P69852	69 aa		4.64	□□□□□ -1.67
YDR401W	YDR401W	PLP1	Q04004	230 aa		4.64	□□□□□ -1.67
YDR401W	YDR401W	PRR2	Q12310	699 aa		4.64	□□□□□ -1.67
YDR401W	YDR401W	CNB1	P25296	175 aa		4.63	□□□□□ -1.67
YDR401W	YDR401W	NUF2	P33895	451 aa		4.63	□□□□□ -1.67
YDR401W	YDR401W	UTP30	P36144	274 aa	Known RBP	4.63	□□□□□ -1.67
YDR401W	YDR401W	SLM6	P38343	150 aa		4.63	□□□□□ -1.67
YDR401W	YDR401W	FIS1	P40515	155 aa		4.63	□□□□□ -1.67
YDR401W	YDR401W	RIO1	Q12196	484 aa	Known RBP	4.63	□□□□□ -1.67
YDR401W	YDR401W	YOR1	P53049	1477 aa		4.62	□□□□□ -1.67
YDR401W	YDR401W	ADH1	P00330	348 aa	Known RBP	4.62	□□□□□ -1.67
YDR401W	YDR401W	YKL102C	P34249	101 aa		4.62	□□□□□ -1.67
YDR401W	YDR401W	ARP3	P47117	449 aa	Known RBP	4.62	□□□□□ -1.67
YDR401W	YDR401W	YGL204C	P53089	101 aa		4.62	□□□□□ -1.67
YDR401W	YDR401W	YGR042W	P53227	271 aa		4.62	□□□□□ -1.67
YDR401W	YDR401W	ALG9	P53868	555 aa	Known RBP	4.62	□□□□□ -1.67
YDR401W	YDR401W	YDR476C	Q03362	224 aa		4.62	□□□□□ -1.67
YDR401W	YDR401W	HPT1	Q04178	221 aa	Known RBP	4.62	□□□□□ -1.67
YDR401W	YDR401W	DGA1	Q08650	418 aa		4.62	□□□□□ -1.67
YDR401W	YDR401W	TOM40	P23644	387 aa	Known RBP	4.61	□□□□□ -1.67
YDR401W	YDR401W	UBC8	P28263	218 aa		4.61	□□□□□ -1.67
YDR401W	YDR401W	CYC2	P38909	366 aa		4.61	□□□□□ -1.67
YDR401W	YDR401W	MOG1	P47123	218 aa		4.61	□□□□□ -1.67
YDR401W	YDR401W	SMD1	Q02260	146 aa	Predicted RBP	4.61	□□□□□ -1.67
YDR401W	YDR401W	GPI17	Q04080	534 aa		4.61	□□□□□ -1.67
YDR401W	YDR401W	ATG39	Q06159	398 aa		4.61	□□□□□ -1.67
YDR401W	YDR401W	IES3	Q12345	250 aa		4.61	□□□□□ -1.67
YDR401W	YDR401W	EFG1	Q3E705	233 aa	Known RBP	4.61	□□□□□ -1.67
YDR401W	YDR401W	PCL1	P24867	279 aa		4.6	□□□□□ -1.67
YDR401W	YDR401W	SKG1	P36169	355 aa		4.6	□□□□□ -1.67
YDR401W	YDR401W	POP4	P38336	279 aa		4.6	□□□□□ -1.67
YDR401W	YDR401W	COS8	P38723	381 aa		4.6	□□□□□ -1.67
YDR401W	YDR401W	YJR111C	P47148	283 aa	Known RBP	4.6	□□□□□ -1.67
YDR401W	YDR401W	CBP6	P07253	162 aa	Predicted RBP	4.59	□□□□□ -1.67
YDR401W	YDR401W	RPS19A	P07280	144 aa	Known RBP	4.59	□□□□□ -1.67
YDR401W	YDR401W	RPS19B	P07281	144 aa	Predicted RBP	4.59	□□□□□ -1.67
YDR401W	YDR401W	YEL045C	P32616	141 aa		4.59	□□□□□ -1.67
YDR401W	YDR401W	UPS2	P35200	230 aa		4.59	□□□□□ -1.67
YDR401W	YDR401W	MRX8	Q05473	314 aa		4.59	□□□□□ -1.67
YDR401W	YDR401W	YPR202W	Q08993	238 aa		4.59	□□□□□ -1.67
YDR401W	YDR401W	ADH3	P07246	375 aa	Known RBP	4.58	□□□□□ -1.68
YDR401W	YDR401W	SGA1	P08019	549 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	YLR156W	P0CE96	114 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	YLR159W	P0CE97	114 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	YLR161W	P0CE98	114 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	PET9	P18239	318 aa	Known RBP	4.58	□□□□□ -1.68
YDR401W	YDR401W	SEC17	P32602	292 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	RSM25	P40496	264 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	AGE2	P40529	298 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	SWP1	Q02795	286 aa		4.58	□□□□□ -1.68
YDR401W	YDR401W	MPD1	Q12404	318 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms