RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeast

Gene RRP1, Length 837 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP1	YDR087C	KRE5	P22023	1365 aa		3.2	□□□□□ -1.9
RRP1	YDR087C	SPT3	P06844	337 aa		3.19	□□□□□ -1.9
RRP1	YDR087C	RIB1	P38066	345 aa		3.19	□□□□□ -1.9
RRP1	YDR087C	FIS1	P40515	155 aa		3.19	□□□□□ -1.9
RRP1	YDR087C	OTU1	P43558	301 aa		3.19	□□□□□ -1.9
RRP1	YDR087C	HAM1	P47119	197 aa	Known RBP	3.19	□□□□□ -1.9
RRP1	YDR087C	EAF6	P47128	113 aa		3.19	□□□□□ -1.9
RRP1	YDR087C	YGR026W	P53217	278 aa		3.19	□□□□□ -1.9
RRP1	YDR087C	TIM11	P81449	96 aa	Predicted RBP	3.19	□□□□□ -1.9
RRP1	YDR087C	TPO4	Q12256	659 aa		3.19	□□□□□ -1.9
RRP1	YDR087C	NRG2	P38082	220 aa		3.18	□□□□□ -1.9
RRP1	YDR087C	DOG1	P38774	246 aa		3.18	□□□□□ -1.9
RRP1	YDR087C	RNH1	Q04740	348 aa		3.18	□□□□□ -1.9
RRP1	YDR087C	MHT1	Q12525	324 aa		3.18	□□□□□ -1.9
RRP1	YDR087C	THP2	O13539	261 aa	Known RBP	3.17	□□□□□ -1.9
RRP1	YDR087C	VMA6	P32366	345 aa	Known RBP	3.17	□□□□□ -1.9
RRP1	YDR087C	SRY1	P36007	326 aa		3.17	□□□□□ -1.9
RRP1	YDR087C	ECM33	P38248	429 aa	Known RBP	3.17	□□□□□ -1.9
RRP1	YDR087C	MIC12	P38341	106 aa		3.17	□□□□□ -1.9
RRP1	YDR087C	RTC3	P38804	111 aa	Predicted RBP	3.17	□□□□□ -1.9
RRP1	YDR087C	YJR056C	P47115	236 aa		3.17	□□□□□ -1.9
RRP1	YDR087C	ERV29	P53337	310 aa		3.17	□□□□□ -1.9
RRP1	YDR087C	ATG39	Q06159	398 aa		3.17	□□□□□ -1.9
RRP1	YDR087C	FKS3	Q04952	1785 aa		3.16	□□□□□ -1.9
RRP1	YDR087C	PUT1	P09368	476 aa		3.16	□□□□□ -1.9
RRP1	YDR087C	GRX2	P17695	143 aa	Known RBP	3.16	□□□□□ -1.9
RRP1	YDR087C	BMH2	P34730	273 aa	Known RBP	3.16	□□□□□ -1.9
RRP1	YDR087C	ILM1	P47155	203 aa		3.16	□□□□□ -1.9
RRP1	YDR087C	YOR020W-A	Q3E824	90 aa		3.16	□□□□□ -1.9
RRP1	YDR087C	TOR1	P35169	2470 aa		3.16	□□□□□ -1.9
RRP1	YDR087C	ADH3	P07246	375 aa	Known RBP	3.15	□□□□□ -1.91
RRP1	YDR087C	YMR31	P19955	123 aa		3.15	□□□□□ -1.91
RRP1	YDR087C	RPL24B	P24000	155 aa	Known RBP	3.15	□□□□□ -1.91
RRP1	YDR087C	MIC26	P50087	233 aa		3.15	□□□□□ -1.91
RRP1	YDR087C	NSA1	P53136	463 aa	Predicted RBP	3.15	□□□□□ -1.91
RRP1	YDR087C	SEY1	Q99287	776 aa		3.15	□□□□□ -1.91
RRP1	YDR087C	SNF2	P22082	1703 aa		3.14	□□□□□ -1.91
RRP1	YDR087C	PRE6	P40303	254 aa	Known RBP	3.14	□□□□□ -1.91
RRP1	YDR087C	YML096W	Q04489	525 aa		3.14	□□□□□ -1.91
RRP1	YDR087C	CDC123	Q05791	360 aa		3.14	□□□□□ -1.91
RRP1	YDR087C	YHR086W-A	Q3E746	53 aa		3.14	□□□□□ -1.91
RRP1	YDR087C	RSF2	P46974	1380 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	SRB8	P25648	1427 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	RAS2	P01120	322 aa	Known RBP	3.13	□□□□□ -1.91
RRP1	YDR087C	ARG80	P07249	177 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	FCY2	P17064	533 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	YAR068W	P39564	161 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	COX15	P40086	486 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	ALG13	P53178	202 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	ARR2	Q06597	130 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	YKL183C-A	Q3E765	70 aa		3.13	□□□□□ -1.91
RRP1	YDR087C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.12	□□□□□ -1.91
RRP1	YDR087C	URA6	P15700	204 aa		3.12	□□□□□ -1.91
RRP1	YDR087C	PBN1	P25580	416 aa		3.12	□□□□□ -1.91
RRP1	YDR087C	PPA2	P28239	310 aa		3.12	□□□□□ -1.91
RRP1	YDR087C	VMA11	P32842	164 aa		3.12	□□□□□ -1.91
RRP1	YDR087C	YBR063C	P38083	404 aa		3.12	□□□□□ -1.91
RRP1	YDR087C	MSS2	P40990	351 aa		3.12	□□□□□ -1.91
RRP1	YDR087C	GCN20	P43535	752 aa	Known RBP	3.12	□□□□□ -1.91
RRP1	YDR087C	DAD3	P69850	94 aa		3.12	□□□□□ -1.91
RRP1	YDR087C	YHR180W	P38868	163 aa		3.11	□□□□□ -1.91
RRP1	YDR087C	ABF2	Q02486	183 aa		3.11	□□□□□ -1.91
RRP1	YDR087C	HEM25	Q07534	307 aa		3.11	□□□□□ -1.91
RRP1	YDR087C	RUD3	Q12234	484 aa	Known RBP	3.11	□□□□□ -1.91
RRP1	YDR087C	RPL9A	P05738	191 aa	Known RBP	3.1	□□□□□ -1.91
RRP1	YDR087C	SCL1	P21243	252 aa	Known RBP	3.1	□□□□□ -1.91
RRP1	YDR087C	IRC22	P40006	225 aa		3.1	□□□□□ -1.91
RRP1	YDR087C	RPL9B	P51401	191 aa	Known RBP	3.1	□□□□□ -1.91
RRP1	YDR087C	DID2	P69771	204 aa		3.1	□□□□□ -1.91
RRP1	YDR087C	MRPS8	Q03799	155 aa		3.1	□□□□□ -1.91
RRP1	YDR087C	NEJ1	Q06148	342 aa		3.1	□□□□□ -1.91
RRP1	YDR087C	ATO3	Q12359	275 aa		3.1	□□□□□ -1.91
RRP1	YDR087C	ROM2	P51862	1356 aa	Known RBP	3.1	□□□□□ -1.91
RRP1	YDR087C	ERG28	P40030	148 aa		3.09	□□□□□ -1.91
RRP1	YDR087C	FYV6	P53913	173 aa		3.09	□□□□□ -1.91
RRP1	YDR087C	YNL010W	P53981	241 aa	Known RBP	3.09	□□□□□ -1.91
RRP1	YDR087C	PRM15	Q03262	622 aa		3.09	□□□□□ -1.91
RRP1	YDR087C	DCN1	Q12395	269 aa		3.09	□□□□□ -1.91
RRP1	YDR087C	RAD9	P14737	1309 aa		3.09	□□□□□ -1.91
RRP1	YDR087C	CDC28	P00546	298 aa	Known RBP	3.08	□□□□□ -1.92
RRP1	YDR087C	MSW1	P04803	379 aa		3.08	□□□□□ -1.92
RRP1	YDR087C	NHP6B	P11633	99 aa	Known RBP	3.08	□□□□□ -1.92
RRP1	YDR087C	PEX4	P29340	183 aa		3.08	□□□□□ -1.92
RRP1	YDR087C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
RRP1	YDR087C	RSM25	P40496	264 aa		3.08	□□□□□ -1.92
RRP1	YDR087C	PRM10	P42946	383 aa		3.08	□□□□□ -1.92
RRP1	YDR087C	BRR6	P53062	197 aa		3.08	□□□□□ -1.92
RRP1	YDR087C	TRM12	Q04235	462 aa		3.08	□□□□□ -1.92
RRP1	YDR087C	SSQ1	Q05931	657 aa	Predicted RBP	3.08	□□□□□ -1.92
RRP1	YDR087C	TY4B-H	P0C2J7	1802 aa		3.07	□□□□□ -1.92
RRP1	YDR087C	TY4B-J	P47024	1803 aa		3.07	□□□□□ -1.92
RRP1	YDR087C	YBR121C-A	P0C5L4	52 aa		3.07	□□□□□ -1.92
RRP1	YDR087C	SSO1	P32867	290 aa		3.07	□□□□□ -1.92
RRP1	YDR087C	MGA1	P53050	456 aa		3.07	□□□□□ -1.92
RRP1	YDR087C	YGR219W	P53307	113 aa		3.07	□□□□□ -1.92
RRP1	YDR087C	PSF1	Q12488	208 aa		3.07	□□□□□ -1.92
RRP1	YDR087C	YRF1-3	P0CX14	1859 aa		3.06	□□□□□ -1.92
RRP1	YDR087C	YRF1-7	P0CX15	1859 aa		3.06	□□□□□ -1.92
RRP1	YDR087C	TCD1	P38756	429 aa		3.06	□□□□□ -1.92
RRP1	YDR087C	NUP57	P48837	541 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms