RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C ERG28P40030 148 aa1.01□□□□□ -2.25
VPS54YDR027C YNL194CP40169 301 aa1.01□□□□□ -2.25
VPS54YDR027C YFR045WP43617 309 aa1.01□□□□□ -2.25
VPS54YDR027C TRM9P49957 279 aa1.01□□□□□ -2.25
VPS54YDR027C MDM34P53083 459 aa1.01□□□□□ -2.25
VPS54YDR027C FCF1Q05498 189 aaPredicted RBP1.01□□□□□ -2.25
VPS54YDR027C SEI1Q06058 285 aa1.01□□□□□ -2.25
VPS54YDR027C SUE1Q06524 206 aa1.01□□□□□ -2.25
VPS54YDR027C YPL150WQ12152 901 aa1.01□□□□□ -2.25
VPS54YDR027C YBL008W-AQ3E821 79 aa1.01□□□□□ -2.25
VPS54YDR027C SEY1Q99287 776 aa1.01□□□□□ -2.25
VPS54YDR027C COQ1P18900 473 aa1□□□□□ -2.25
VPS54YDR027C YMR31P19955 123 aa1□□□□□ -2.25
VPS54YDR027C SEC22P22214 214 aa1□□□□□ -2.25
VPS54YDR027C RPL24BP24000 155 aaKnown RBP1□□□□□ -2.25
VPS54YDR027C TKL2P33315 681 aa1□□□□□ -2.25
VPS54YDR027C YHI9P38765 294 aa1□□□□□ -2.25
VPS54YDR027C VMA22P38784 181 aa1□□□□□ -2.25
VPS54YDR027C CWC23P52868 283 aaPredicted RBP1□□□□□ -2.25
VPS54YDR027C MIG2P53035 382 aa1□□□□□ -2.25
VPS54YDR027C MRH4P53166 561 aa1□□□□□ -2.25
VPS54YDR027C EFM5P53200 248 aaKnown RBP1□□□□□ -2.25
VPS54YDR027C YNL046WP53956 172 aa1□□□□□ -2.25
VPS54YDR027C SNZ1Q03148 297 aa1□□□□□ -2.25
VPS54YDR027C GOT1Q03554 138 aa1□□□□□ -2.25
VPS54YDR027C MSA1Q08471 629 aa1□□□□□ -2.25
VPS54YDR027C YHR139C-AO13536 103 aa1□□□□□ -2.25
VPS54YDR027C ZWF1P11412 505 aaKnown RBP1□□□□□ -2.25
VPS54YDR027C PPH21P23594 369 aa1□□□□□ -2.25
VPS54YDR027C TOM40P23644 387 aaKnown RBP1□□□□□ -2.25
VPS54YDR027C DPB2P24482 689 aaPredicted RBP1□□□□□ -2.25
VPS54YDR027C BMH1P29311 267 aaKnown RBP1□□□□□ -2.25
VPS54YDR027C GDH2P33327 1092 aaKnown RBP1□□□□□ -2.25
VPS54YDR027C PRP18P33411 251 aaPredicted RBP1□□□□□ -2.25
VPS54YDR027C YHB1P39676 399 aaKnown RBP1□□□□□ -2.25
VPS54YDR027C COX15P40086 486 aa1□□□□□ -2.25
VPS54YDR027C PHB1P40961 287 aa1□□□□□ -2.25
VPS54YDR027C YJR149WP47177 404 aa1□□□□□ -2.25
VPS54YDR027C TOS8P53147 276 aa1□□□□□ -2.25
VPS54YDR027C ALG13P53178 202 aa1□□□□□ -2.25
VPS54YDR027C YDR124WQ04608 324 aa1□□□□□ -2.25
VPS54YDR027C YPR063CQ12160 140 aa1□□□□□ -2.25
VPS54YDR027C AGC1Q12482 902 aa1□□□□□ -2.25
VPS54YDR027C NOT5Q12514 560 aaPredicted RBP1□□□□□ -2.25
VPS54YDR027C ISD11Q6Q560 94 aa1□□□□□ -2.25
VPS54YDR027C YDR157WA0A023PZE8 133 aa0.99□□□□□ -2.25
VPS54YDR027C RAD10P06838 210 aa0.99□□□□□ -2.25
VPS54YDR027C SFC1P33303 322 aa0.99□□□□□ -2.25
VPS54YDR027C CPR5P35176 225 aa0.99□□□□□ -2.25
VPS54YDR027C VPS51P36116 164 aa0.99□□□□□ -2.25
VPS54YDR027C MRPL39P36533 70 aa0.99□□□□□ -2.25
VPS54YDR027C POP7P38291 140 aa0.99□□□□□ -2.25
VPS54YDR027C ECM14P38836 430 aa0.99□□□□□ -2.25
VPS54YDR027C YER084WP40057 128 aa0.99□□□□□ -2.25
VPS54YDR027C PIR5P46999 287 aa0.99□□□□□ -2.25
VPS54YDR027C CDC123Q05791 360 aa0.99□□□□□ -2.25
VPS54YDR027C SYC1Q08553 188 aaPredicted RBP0.99□□□□□ -2.25
VPS54YDR027C YOR186WQ08560 144 aa0.99□□□□□ -2.25
VPS54YDR027C YOR342CQ12182 319 aa0.99□□□□□ -2.25
VPS54YDR027C YEL009C-AA0A023PZF2 135 aa0.99□□□□□ -2.25
VPS54YDR027C CCW14O13547 238 aa0.99□□□□□ -2.25
VPS54YDR027C BCY1P07278 416 aaKnown RBP0.99□□□□□ -2.25
VPS54YDR027C ARC19P33204 171 aaKnown RBP0.99□□□□□ -2.25
VPS54YDR027C CUE1P38428 203 aa0.99□□□□□ -2.25
VPS54YDR027C SIP3P38717 1229 aa0.99□□□□□ -2.25
VPS54YDR027C YMR144WP40214 342 aaKnown RBP0.99□□□□□ -2.25
VPS54YDR027C YIR035CP40579 254 aa0.99□□□□□ -2.25
VPS54YDR027C RAD17P48581 401 aa0.99□□□□□ -2.25
VPS54YDR027C RSM27P53305 110 aa0.99□□□□□ -2.25
VPS54YDR027C BNA7Q04066 261 aa0.99□□□□□ -2.25
VPS54YDR027C YMR114CQ04471 368 aaKnown RBP0.99□□□□□ -2.25
VPS54YDR027C GEP5Q12393 293 aa0.99□□□□□ -2.25
VPS54YDR027C EMP46Q12396 444 aa0.99□□□□□ -2.25
VPS54YDR027C MRX4Q12467 430 aa0.99□□□□□ -2.25
VPS54YDR027C PDR18P53756 1333 aa0.99□□□□□ -2.25
VPS54YDR027C HIS3P06633 220 aa0.98□□□□□ -2.25
VPS54YDR027C MET2P08465 486 aa0.98□□□□□ -2.25
VPS54YDR027C YBR121C-AP0C5L4 52 aa0.98□□□□□ -2.25
VPS54YDR027C ERD2P18414 219 aa0.98□□□□□ -2.25
VPS54YDR027C SRY1P36007 326 aa0.98□□□□□ -2.25
VPS54YDR027C MSA2P36157 363 aa0.98□□□□□ -2.25
VPS54YDR027C TEM1P38987 245 aa0.98□□□□□ -2.25
VPS54YDR027C MTW1P39731 289 aa0.98□□□□□ -2.25
VPS54YDR027C YER034WP40022 185 aaKnown RBP0.98□□□□□ -2.25
VPS54YDR027C YRB2P40517 327 aa0.98□□□□□ -2.25
VPS54YDR027C ADO1P47143 340 aaKnown RBP0.98□□□□□ -2.25
VPS54YDR027C MIC26P50087 233 aa0.98□□□□□ -2.25
VPS54YDR027C MGA1P53050 456 aa0.98□□□□□ -2.25
VPS54YDR027C NSA1P53136 463 aaPredicted RBP0.98□□□□□ -2.25
VPS54YDR027C HOP2P53187 214 aa0.98□□□□□ -2.25
VPS54YDR027C YLR030WQ07967 263 aa0.98□□□□□ -2.25
VPS54YDR027C YOR268CQ08734 132 aa0.98□□□□□ -2.25
VPS54YDR027C PST1Q12355 444 aa0.98□□□□□ -2.25
VPS54YDR027C BBP1Q12365 385 aa0.98□□□□□ -2.25
VPS54YDR027C CMC2Q3E7A4 109 aa0.98□□□□□ -2.25
VPS54YDR027C KRE1P17260 313 aa0.98□□□□□ -2.25
VPS54YDR027C STE18P18852 110 aa0.98□□□□□ -2.25
VPS54YDR027C RNP1P32385 249 aa0.98□□□□□ -2.25
VPS54YDR027C PRX1P34227 261 aaKnown RBP0.98□□□□□ -2.25
VPS54YDR027C GIM4P40005 111 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 372.9 ms