RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W PPA2P28239 310 aa1.17□□□□□ -2.22
MSH5YDL154W CSG2P35206 410 aa1.17□□□□□ -2.22
MSH5YDL154W YKR032WP36127 104 aa1.17□□□□□ -2.22
MSH5YDL154W ECM4P36156 370 aa1.17□□□□□ -2.22
MSH5YDL154W GCN20P43535 752 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W CPR7P47103 393 aa1.17□□□□□ -2.22
MSH5YDL154W APJ1P53940 528 aa1.17□□□□□ -2.22
MSH5YDL154W SWP1Q02795 286 aa1.17□□□□□ -2.22
MSH5YDL154W SPG4Q04438 115 aa1.17□□□□□ -2.22
MSH5YDL154W YDR278CQ05612 105 aa1.17□□□□□ -2.22
MSH5YDL154W TIM22Q12328 207 aa1.17□□□□□ -2.22
MSH5YDL154W NHP6AP11632 93 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W NHP6BP11633 99 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W AGA2P32781 87 aa1.17□□□□□ -2.22
MSH5YDL154W TRM5P38793 499 aa1.17□□□□□ -2.22
MSH5YDL154W SMB1P40018 196 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W SYF2P53277 215 aaPredicted RBP1.17□□□□□ -2.22
MSH5YDL154W YDR476CQ03362 224 aa1.17□□□□□ -2.22
MSH5YDL154W DML1Q03652 475 aa1.17□□□□□ -2.22
MSH5YDL154W ARO80Q04052 950 aa1.17□□□□□ -2.22
MSH5YDL154W GTO3Q04806 366 aa1.17□□□□□ -2.22
MSH5YDL154W CSM4Q08955 156 aa1.17□□□□□ -2.22
MSH5YDL154W YPR011CQ12251 326 aa1.17□□□□□ -2.22
MSH5YDL154W BBP1Q12365 385 aa1.17□□□□□ -2.22
MSH5YDL154W CDC8P00572 216 aa1.16□□□□□ -2.22
MSH5YDL154W RPL27AP0C2H6 136 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W RPL27BP0C2H7 136 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W MATALPHA1P0CY06 175 aa1.16□□□□□ -2.22
MSH5YDL154W HMLALPHA1P0CY07 175 aa1.16□□□□□ -2.22
MSH5YDL154W HOM6P31116 359 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W GDH2P33327 1092 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W NUF2P33895 451 aa1.16□□□□□ -2.22
MSH5YDL154W YGP1P38616 354 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W GRE3P38715 327 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
MSH5YDL154W YER085CP40058 173 aa1.16□□□□□ -2.22
MSH5YDL154W MOG1P47123 218 aa1.16□□□□□ -2.22
MSH5YDL154W JHD2P47156 728 aaPredicted RBP1.16□□□□□ -2.22
MSH5YDL154W NBP35P52920 328 aa1.16□□□□□ -2.22
MSH5YDL154W YGL204CP53089 101 aa1.16□□□□□ -2.22
MSH5YDL154W YMR253CQ04835 414 aa1.16□□□□□ -2.22
MSH5YDL154W YLR126CQ12288 251 aa1.16□□□□□ -2.22
MSH5YDL154W ATG31Q12421 196 aa1.16□□□□□ -2.22
MSH5YDL154W TDH2P00358 332 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W RAD10P06838 210 aa1.16□□□□□ -2.22
MSH5YDL154W ZWF1P11412 505 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W LHP1P33399 275 aaKnown RBP1.16□□□□□ -2.22
MSH5YDL154W FIG1P38224 298 aa1.16□□□□□ -2.22
MSH5YDL154W FCY21P40039 528 aa1.16□□□□□ -2.22
MSH5YDL154W YER188WP40103 239 aa1.16□□□□□ -2.22
MSH5YDL154W NSA1P53136 463 aaPredicted RBP1.16□□□□□ -2.22
MSH5YDL154W GET1P53192 235 aa1.16□□□□□ -2.22
MSH5YDL154W YGR042WP53227 271 aa1.16□□□□□ -2.22
MSH5YDL154W GTR2P53290 341 aa1.16□□□□□ -2.22
MSH5YDL154W QCR2P07257 368 aa1.15□□□□□ -2.23
MSH5YDL154W PET54P10834 293 aa1.15□□□□□ -2.23
MSH5YDL154W YPK2P18961 677 aa1.15□□□□□ -2.23
MSH5YDL154W SEC14P24280 304 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W MIG1P27705 504 aa1.15□□□□□ -2.23
MSH5YDL154W MEI4P29467 408 aa1.15□□□□□ -2.23
MSH5YDL154W HYR1P40581 163 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W YJR141WP47172 347 aaPredicted RBP1.15□□□□□ -2.23
MSH5YDL154W YGL088WP53151 121 aa1.15□□□□□ -2.23
MSH5YDL154W COS6P53344 381 aa1.15□□□□□ -2.23
MSH5YDL154W PEX12Q04370 399 aa1.15□□□□□ -2.23
MSH5YDL154W CDD1Q06549 142 aa1.15□□□□□ -2.23
MSH5YDL154W RPL28P02406 149 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W SNA3P14359 133 aa1.15□□□□□ -2.23
MSH5YDL154W FBA1P14540 359 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W KRE1P17260 313 aa1.15□□□□□ -2.23
MSH5YDL154W YKT6P36015 200 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W RCN1P36054 211 aa1.15□□□□□ -2.23
MSH5YDL154W SEC72P39742 193 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W GVP36P40531 326 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W GLG2P47011 380 aa1.15□□□□□ -2.23
MSH5YDL154W ILM1P47155 203 aa1.15□□□□□ -2.23
MSH5YDL154W NOP13P53883 403 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
MSH5YDL154W DID2P69771 204 aa1.15□□□□□ -2.23
MSH5YDL154W EMI1Q04406 187 aa1.15□□□□□ -2.23
MSH5YDL154W YMR226CQ05016 267 aaKnown RBP1.15□□□□□ -2.23
MSH5YDL154W LOA1Q06508 300 aa1.15□□□□□ -2.23
MSH5YDL154W SYC1Q08553 188 aaPredicted RBP1.15□□□□□ -2.23
MSH5YDL154W RPS28BP0C0X0 67 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W RSA4P25382 515 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W IDH1P28834 360 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
MSH5YDL154W GSP1P32835 219 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W GSP2P32836 220 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W SRP102P36057 244 aaPredicted RBP1.14□□□□□ -2.23
MSH5YDL154W MIC12P38341 106 aa1.14□□□□□ -2.23
MSH5YDL154W GOS1P38736 223 aa1.14□□□□□ -2.23
MSH5YDL154W PRE6P40303 254 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W FIS1P40515 155 aa1.14□□□□□ -2.23
MSH5YDL154W GON7P46984 123 aa1.14□□□□□ -2.23
MSH5YDL154W HOC1P47124 396 aa1.14□□□□□ -2.23
MSH5YDL154W YJR079WP47126 109 aa1.14□□□□□ -2.23
MSH5YDL154W SBH2P52871 88 aa1.14□□□□□ -2.23
MSH5YDL154W MRH4P53166 561 aa1.14□□□□□ -2.23
MSH5YDL154W CUS2P53830 285 aaPredicted RBP1.14□□□□□ -2.23
MSH5YDL154W CTF19Q02732 369 aa1.14□□□□□ -2.23
MSH5YDL154W MAK3Q03503 176 aa1.14□□□□□ -2.23
MSH5YDL154W HEM25Q07534 307 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 107.3 ms