RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VCX1	YDL128W	RPL14A	P36105	138 aa	Known RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	YBR096W	P38256	230 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	SSH1	P38353	490 aa	Known RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	RPL14B	P38754	138 aa	Known RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	FLO5	P38894	1075 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	SMD3	P43321	101 aa	Known RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	ATG27	P46989	271 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	YGR151C	P53287	111 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	PAU4	P53427	120 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	ALG9	P53868	555 aa	Known RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	PKR1	Q03880	122 aa	Known RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	MRPL51	Q06090	140 aa	Predicted RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	NAT5	Q08689	176 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	FCY22	Q12119	530 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	MCT1	Q12283	360 aa		4.88	□□□□□ -1.63
VCX1	YDL128W	SME1	Q12330	94 aa	Predicted RBP	4.88	□□□□□ -1.63
VCX1	YDL128W	ADH2	P00331	348 aa	Known RBP	4.87	□□□□□ -1.63
VCX1	YDL128W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
VCX1	YDL128W	PAU1	P0CE88	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU14	P0CE89	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU6	P0CE90	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU18	P0CE91	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU8	P0CE92	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU11	P0CE93	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PDE1	P22434	369 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	ERG1	P32476	496 aa	Known RBP	4.87	□□□□□ -1.63
VCX1	YDL128W	GCS1	P35197	352 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU13	P38725	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	RPP1	P38786	293 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	YHR210C	P38893	341 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	YIL152W	P40455	235 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	YIL067C	P40514	678 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	BUD8	P41698	603 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	ERG26	P53199	349 aa	Known RBP	4.87	□□□□□ -1.63
VCX1	YDL128W	TGL2	P54857	326 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	APS2	Q00381	147 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU10	Q03050	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	THI74	Q04083	370 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	YMR082C	Q04276	118 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	MCH1	Q07376	486 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	CSI2	Q08054	341 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAU20	Q08322	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	SWM1	Q12379	170 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	PAR32	Q12515	295 aa	Known RBP	4.87	□□□□□ -1.63
VCX1	YDL128W	PAU9	Q3E770	120 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	UBA3	Q99344	299 aa		4.87	□□□□□ -1.63
VCX1	YDL128W	CPR2	P23285	205 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	UMP1	P38293	148 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	YEL057C	P39983	233 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	NAS2	P40555	220 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	SMK1	P41808	388 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	GWT1	P47026	490 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	PMT3	P47190	753 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	ERG25	P53045	309 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	YGR066C	P53242	292 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	MTQ2	Q03920	221 aa	Predicted RBP	4.86	□□□□□ -1.63
VCX1	YDL128W	YDL242W	Q07746	117 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	PAU23	Q07987	124 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	ERV2	Q12284	196 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	PAU17	Q12370	124 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	ERP4	Q12450	207 aa		4.86	□□□□□ -1.63
VCX1	YDL128W	CTA1	P15202	515 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	SPO7	P18410	259 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	MRS4	P23500	304 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	ELO2	P25358	347 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	ARO4	P32449	370 aa	Known RBP	4.85	□□□□□ -1.63
VCX1	YDL128W	SRB5	P32585	307 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	MIX23	P38162	196 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	MNL1	P38888	796 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	YJR011C	P47086	261 aa	Predicted RBP	4.85	□□□□□ -1.63
VCX1	YDL128W	HHT1	P61830	136 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	RCE1	Q03530	315 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	INP1	Q03694	420 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	YLR030W	Q07967	263 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	HRT1	Q08273	121 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	YPR071W	Q12346	211 aa		4.85	□□□□□ -1.63
VCX1	YDL128W	ADE8	P04161	214 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	URA5	P13298	226 aa	Known RBP	4.84	□□□□□ -1.63
VCX1	YDL128W	NUP1	P20676	1076 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	RFA3	P26755	122 aa	Known RBP	4.84	□□□□□ -1.63
VCX1	YDL128W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
VCX1	YDL128W	GPX1	P36014	167 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	AUR1	P36107	401 aa	Predicted RBP	4.84	□□□□□ -1.63
VCX1	YDL128W	XBP1	P40489	647 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	CDC40	P40968	455 aa	Predicted RBP	4.84	□□□□□ -1.63
VCX1	YDL128W	ERJ5	P43613	295 aa	Predicted RBP	4.84	□□□□□ -1.63
VCX1	YDL128W	RIB4	P50861	169 aa	Predicted RBP	4.84	□□□□□ -1.63
VCX1	YDL128W	GIS1	Q03833	894 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	COQ10	Q08058	207 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	REX3	Q12090	404 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	FRE7	Q12333	620 aa		4.84	□□□□□ -1.63
VCX1	YDL128W	COX2	P00410	251 aa		4.83	□□□□□ -1.64
VCX1	YDL128W	POR1	P04840	283 aa	Known RBP	4.83	□□□□□ -1.64
VCX1	YDL128W	STE18	P18852	110 aa		4.83	□□□□□ -1.64
VCX1	YDL128W	SUA7	P29055	345 aa	Predicted RBP	4.83	□□□□□ -1.64
VCX1	YDL128W	GLC7	P32598	312 aa	Known RBP	4.83	□□□□□ -1.64
VCX1	YDL128W	UTR5	P32630	166 aa		4.83	□□□□□ -1.64
VCX1	YDL128W	PMU1	P36069	295 aa		4.83	□□□□□ -1.64
VCX1	YDL128W	DOG1	P38774	246 aa		4.83	□□□□□ -1.64
VCX1	YDL128W	ANS1	P38832	159 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms