RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C NTF2P33331 125 aaKnown RBP2.52□□□□□ -2.01
RPN4YDL020C MIC12P38341 106 aa2.52□□□□□ -2.01
RPN4YDL020C COX15P40086 486 aa2.52□□□□□ -2.01
RPN4YDL020C MSS2P40990 351 aa2.52□□□□□ -2.01
RPN4YDL020C INM2Q05533 292 aa2.52□□□□□ -2.01
RPN4YDL020C MSA1Q08471 629 aa2.52□□□□□ -2.01
RPN4YDL020C MRPS28P21771 286 aa2.51□□□□□ -2.01
RPN4YDL020C RAD51P25454 400 aa2.51□□□□□ -2.01
RPN4YDL020C ILM1P47155 203 aa2.51□□□□□ -2.01
RPN4YDL020C MCM22P47167 239 aa2.51□□□□□ -2.01
RPN4YDL020C YJR149WP47177 404 aa2.51□□□□□ -2.01
RPN4YDL020C DSK2P48510 373 aa2.51□□□□□ -2.01
RPN4YDL020C SUE1Q06524 206 aa2.51□□□□□ -2.01
RPN4YDL020C CDD1Q06549 142 aa2.51□□□□□ -2.01
RPN4YDL020C VPS68Q12016 184 aa2.51□□□□□ -2.01
RPN4YDL020C BCY1P07278 416 aaKnown RBP2.5□□□□□ -2.01
RPN4YDL020C CLB6P32943 380 aa2.5□□□□□ -2.01
RPN4YDL020C ARC15P40518 154 aaRIP-Chip data2.5□□□□□ -2.01not detected
RPN4YDL020C GTR2P53290 341 aa2.5□□□□□ -2.01
RPN4YDL020C DAS2Q12084 232 aa2.5□□□□□ -2.01
RPN4YDL020C YRF1-3P0CX14 1859 aa2.49□□□□□ -2.01
RPN4YDL020C YRF1-7P0CX15 1859 aa2.49□□□□□ -2.01
RPN4YDL020C YRF1-6P53819 1859 aa2.49□□□□□ -2.01
RPN4YDL020C NHP6BP11633 99 aaKnown RBP2.49□□□□□ -2.01
RPN4YDL020C COQ1P18900 473 aa2.49□□□□□ -2.01
RPN4YDL020C YMR31P19955 123 aa2.49□□□□□ -2.01
RPN4YDL020C PRE6P40303 254 aaKnown RBP2.49□□□□□ -2.01
RPN4YDL020C RMR1P53060 241 aa2.49□□□□□ -2.01
RPN4YDL020C NSA1P53136 463 aaPredicted RBP2.49□□□□□ -2.01
RPN4YDL020C RTC4P53850 401 aa2.49□□□□□ -2.01
RPN4YDL020C SLM2P53955 656 aa2.49□□□□□ -2.01
RPN4YDL020C ABP140Q08641 628 aaKnown RBP2.49□□□□□ -2.01
RPN4YDL020C YPL257WQ08974 193 aa2.49□□□□□ -2.01
RPN4YDL020C RIO1Q12196 484 aaKnown RBP2.49□□□□□ -2.01
RPN4YDL020C HTL1Q9URQ5 78 aa2.49□□□□□ -2.01
RPN4YDL020C ARG80P07249 177 aa2.49□□□□□ -2.01
RPN4YDL020C DSF1P0CX08 502 aa2.49□□□□□ -2.01
RPN4YDL020C YNR073CP0CX09 502 aa2.49□□□□□ -2.01
RPN4YDL020C PBN1P25580 416 aa2.49□□□□□ -2.01
RPN4YDL020C UBC6P33296 250 aaPredicted RBP2.49□□□□□ -2.01
RPN4YDL020C URA8P38627 578 aaPredicted RBP2.49□□□□□ -2.01
RPN4YDL020C YHL026CP38740 315 aa2.49□□□□□ -2.01
RPN4YDL020C RTC3P38804 111 aaPredicted RBP2.49□□□□□ -2.01
RPN4YDL020C YHR125WP38831 101 aa2.49□□□□□ -2.01
RPN4YDL020C MRPL49P40858 161 aaPredicted RBP2.49□□□□□ -2.01
RPN4YDL020C CAT5P41735 233 aa2.49□□□□□ -2.01
RPN4YDL020C TMA22P47089 198 aaPredicted RBP2.49□□□□□ -2.01
RPN4YDL020C TOS8P53147 276 aa2.49□□□□□ -2.01
RPN4YDL020C SPC24Q04477 213 aa2.49□□□□□ -2.01
RPN4YDL020C CDC123Q05791 360 aa2.49□□□□□ -2.01
RPN4YDL020C SEY1Q99287 776 aa2.49□□□□□ -2.01
RPN4YDL020C TUS1Q06412 1307 aa2.48□□□□□ -2.01
RPN4YDL020C JIP3O13555 125 aa2.48□□□□□ -2.01
RPN4YDL020C Q0255P03881 472 aa2.48□□□□□ -2.01
RPN4YDL020C SPT3P06844 337 aa2.48□□□□□ -2.01
RPN4YDL020C CCA1P21269 546 aa2.48□□□□□ -2.01
RPN4YDL020C HAM1P47119 197 aaKnown RBP2.48□□□□□ -2.01
RPN4YDL020C RGM1Q00453 211 aa2.48□□□□□ -2.01
RPN4YDL020C FKS1P38631 1876 aaKnown RBP2.47□□□□□ -2.01
RPN4YDL020C COX5AP00424 153 aa2.47□□□□□ -2.01
RPN4YDL020C YHR032W-AP0C5N6 59 aa2.47□□□□□ -2.01
RPN4YDL020C MAK31P23059 88 aa2.47□□□□□ -2.01
RPN4YDL020C NTG1P31378 399 aa2.47□□□□□ -2.01
RPN4YDL020C SCM4P32564 187 aa2.47□□□□□ -2.01
RPN4YDL020C SSO1P32867 290 aa2.47□□□□□ -2.01
RPN4YDL020C YPT52P36018 234 aaKnown RBP2.47□□□□□ -2.01
RPN4YDL020C RIB1P38066 345 aa2.47□□□□□ -2.01
RPN4YDL020C SIP3P38717 1229 aa2.47□□□□□ -2.01
RPN4YDL020C PEX17P40155 199 aa2.47□□□□□ -2.01
RPN4YDL020C SMX2P40204 77 aaKnown RBP2.47□□□□□ -2.01
RPN4YDL020C FIS1P40515 155 aa2.47□□□□□ -2.01
RPN4YDL020C YIL001WP40560 513 aa2.47□□□□□ -2.01
RPN4YDL020C MIC26P50087 233 aa2.47□□□□□ -2.01
RPN4YDL020C COS6P53344 381 aa2.47□□□□□ -2.01
RPN4YDL020C YMR279CQ03263 540 aa2.47□□□□□ -2.01
RPN4YDL020C TPO4Q12256 659 aa2.47□□□□□ -2.01
RPN4YDL020C RIM15P43565 1770 aa2.47□□□□□ -2.01
RPN4YDL020C FIG2P25653 1609 aa2.46□□□□□ -2.01
RPN4YDL020C YHR139C-AO13536 103 aa2.46□□□□□ -2.02
RPN4YDL020C SMD3P43321 101 aaKnown RBP2.46□□□□□ -2.02
RPN4YDL020C PGA2P53903 129 aa2.46□□□□□ -2.02
RPN4YDL020C NIP7Q08962 181 aaKnown RBP2.46□□□□□ -2.02
RPN4YDL020C GIS3Q12418 502 aa2.46□□□□□ -2.02
RPN4YDL020C YKL183C-AQ3E765 70 aa2.46□□□□□ -2.02
RPN4YDL020C ADH3P07246 375 aaKnown RBP2.45□□□□□ -2.02
RPN4YDL020C YBR121C-AP0C5L4 52 aa2.45□□□□□ -2.02
RPN4YDL020C SCO1P23833 295 aa2.45□□□□□ -2.02
RPN4YDL020C RPF1P38805 295 aaKnown RBP2.45□□□□□ -2.02
RPN4YDL020C ERG28P40030 148 aa2.45□□□□□ -2.02
RPN4YDL020C GVP36P40531 326 aaKnown RBP2.45□□□□□ -2.02
RPN4YDL020C YRB1P41920 201 aaKnown RBP2.45□□□□□ -2.02
RPN4YDL020C RPA43P46669 326 aa2.45□□□□□ -2.02
RPN4YDL020C SNX4P47057 423 aa2.45□□□□□ -2.02
RPN4YDL020C ALG13P53178 202 aa2.45□□□□□ -2.02
RPN4YDL020C YGR026WP53217 278 aa2.45□□□□□ -2.02
RPN4YDL020C ERV29P53337 310 aa2.45□□□□□ -2.02
RPN4YDL020C IGO1P53897 168 aa2.45□□□□□ -2.02
RPN4YDL020C FYV6P53913 173 aa2.45□□□□□ -2.02
RPN4YDL020C RPL22BP56628 122 aaKnown RBP2.45□□□□□ -2.02
RPN4YDL020C YML096WQ04489 525 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms