RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W WSS1P38838 269 aa1.97□□□□□ -2.09
MCD1YDL003W SNU13P39990 126 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W SMB1P40018 196 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W RPL13BP40212 199 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W MPM1P40364 252 aa1.97□□□□□ -2.09
MCD1YDL003W YIL161WP40449 235 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W NAS2P40555 220 aa1.97□□□□□ -2.09
MCD1YDL003W PAU5P43575 122 aa1.97□□□□□ -2.09
MCD1YDL003W PAU12P53343 120 aa1.97□□□□□ -2.09
MCD1YDL003W SMM1P53720 384 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W YNL140CP53910 189 aa1.97□□□□□ -2.09
MCD1YDL003W APS2Q00381 147 aa1.97□□□□□ -2.09
MCD1YDL003W MET14Q02196 202 aa1.97□□□□□ -2.09
MCD1YDL003W OAZ1Q02803 292 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-DR2Q03483 438 aa1.97□□□□□ -2.09
MCD1YDL003W YMR166CQ03829 368 aa1.97□□□□□ -2.09
MCD1YDL003W ROY1Q04847 553 aa1.97□□□□□ -2.09
MCD1YDL003W MRPL35Q06678 367 aa1.97□□□□□ -2.09
MCD1YDL003W YDL242WQ07746 117 aa1.97□□□□□ -2.09
MCD1YDL003W YLR030WQ07967 263 aa1.97□□□□□ -2.09
MCD1YDL003W YOL024WQ08172 172 aa1.97□□□□□ -2.09
MCD1YDL003W ATG41Q12048 136 aa1.97□□□□□ -2.09
MCD1YDL003W YLR050CQ12155 161 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W TY2A-BQ12260 438 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-OR2Q12293 438 aa1.97□□□□□ -2.09
MCD1YDL003W SUL2Q12325 893 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-DR1Q12392 438 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-OR1Q12439 438 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-DR3Q99303 438 aa1.97□□□□□ -2.09
MCD1YDL003W UBR1P19812 1950 aa1.96□□□□□ -2.1
MCD1YDL003W RAD6P06104 172 aa1.96□□□□□ -2.1
MCD1YDL003W QCR2P07257 368 aa1.96□□□□□ -2.1
MCD1YDL003W PUT1P09368 476 aa1.96□□□□□ -2.1
MCD1YDL003W RPS21AP0C0V8 87 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W INO4P13902 151 aa1.96□□□□□ -2.1
MCD1YDL003W BGL2P15703 313 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W PCL1P24867 279 aa1.96□□□□□ -2.1
MCD1YDL003W OCH1P31755 480 aa1.96□□□□□ -2.1
MCD1YDL003W PAU2P32612 120 aa1.96□□□□□ -2.1
MCD1YDL003W PPG1P32838 368 aa1.96□□□□□ -2.1
MCD1YDL003W GEX2P36173 615 aa1.96□□□□□ -2.1
MCD1YDL003W LDB7P38210 180 aa1.96□□□□□ -2.1
MCD1YDL003W YHL041WP38730 149 aa1.96□□□□□ -2.1
MCD1YDL003W SEC72P39742 193 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W YIL012WP40551 113 aa1.96□□□□□ -2.1
MCD1YDL003W IME4P41833 600 aa1.96□□□□□ -2.1
MCD1YDL003W GZF3P42944 551 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W RPN11P43588 306 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W RPS10BP46784 105 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W IKS1P47042 667 aa1.96□□□□□ -2.1
MCD1YDL003W TTI2P47168 421 aa1.96□□□□□ -2.1
MCD1YDL003W LCL3P53153 274 aa1.96□□□□□ -2.1
MCD1YDL003W VHT1P53241 593 aa1.96□□□□□ -2.1
MCD1YDL003W YGR250CP53316 781 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W YPL080CQ02826 108 aa1.96□□□□□ -2.1
MCD1YDL003W ADD37Q03233 198 aa1.96□□□□□ -2.1
MCD1YDL003W IZH1Q03419 316 aa1.96□□□□□ -2.1
MCD1YDL003W MZM1Q03429 123 aaPredicted RBP1.96□□□□□ -2.1
MCD1YDL003W GOT1Q03554 138 aa1.96□□□□□ -2.1
MCD1YDL003W YDR415CQ04033 374 aaPredicted RBP1.96□□□□□ -2.1
MCD1YDL003W HNT1Q04344 158 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W EMI1Q04406 187 aa1.96□□□□□ -2.1
MCD1YDL003W CRF1Q04930 467 aa1.96□□□□□ -2.1
MCD1YDL003W LIP2Q06005 328 aa1.96□□□□□ -2.1
MCD1YDL003W LOA1Q06508 300 aa1.96□□□□□ -2.1
MCD1YDL003W RRT7Q07829 113 aa1.96□□□□□ -2.1
MCD1YDL003W TEN1Q07921 160 aa1.96□□□□□ -2.1
MCD1YDL003W RPS10AQ08745 105 aaPredicted RBP1.96□□□□□ -2.1
MCD1YDL003W FCY22Q12119 530 aa1.96□□□□□ -2.1
MCD1YDL003W YLR112WQ12130 139 aa1.96□□□□□ -2.1
MCD1YDL003W SME1Q12330 94 aaPredicted RBP1.96□□□□□ -2.1
MCD1YDL003W PST1Q12355 444 aa1.96□□□□□ -2.1
MCD1YDL003W IZH2Q12442 317 aa1.96□□□□□ -2.1
MCD1YDL003W AIM45Q12480 344 aaKnown RBP1.96□□□□□ -2.1
MCD1YDL003W YDL007C-AQ2V2Q0 85 aa1.96□□□□□ -2.1
MCD1YDL003W YGR161W-CQ3E744 92 aa1.96□□□□□ -2.1
MCD1YDL003W MOT1P32333 1867 aa1.96□□□□□ -2.1
MCD1YDL003W RIF1P29539 1916 aa1.95□□□□□ -2.1
MCD1YDL003W CPR1P14832 162 aaKnown RBP1.95□□□□□ -2.1
MCD1YDL003W ATP10P18496 279 aa1.95□□□□□ -2.1
MCD1YDL003W OLE1P21147 510 aaKnown RBP1.95□□□□□ -2.1
MCD1YDL003W TKL1P23254 680 aaKnown RBP1.95□□□□□ -2.1
MCD1YDL003W HYP2P23301 157 aaKnown RBP1.95□□□□□ -2.1
MCD1YDL003W ATS1P31386 333 aa1.95□□□□□ -2.1
MCD1YDL003W GLC7P32598 312 aaKnown RBP1.95□□□□□ -2.1
MCD1YDL003W MDL1P33310 695 aa1.95□□□□□ -2.1
MCD1YDL003W TIR2P33890 251 aa1.95□□□□□ -2.1
MCD1YDL003W YKL187CP34231 750 aa1.95□□□□□ -2.1
MCD1YDL003W TCD2P36101 447 aaKnown RBP1.95□□□□□ -2.1
MCD1YDL003W QDR3P38227 689 aa1.95□□□□□ -2.1
MCD1YDL003W REG2P38232 338 aa1.95□□□□□ -2.1
MCD1YDL003W VID24P38263 362 aa1.95□□□□□ -2.1
MCD1YDL003W NTC20P38302 140 aaPredicted RBP1.95□□□□□ -2.1
MCD1YDL003W YHR130CP38834 111 aa1.95□□□□□ -2.1
MCD1YDL003W EAF5P39995 279 aa1.95□□□□□ -2.1
MCD1YDL003W OTU1P43558 301 aa1.95□□□□□ -2.1
MCD1YDL003W CIN2P46670 268 aa1.95□□□□□ -2.1
MCD1YDL003W XPT1P47165 209 aa1.95□□□□□ -2.1
MCD1YDL003W YGR149WP48236 432 aa1.95□□□□□ -2.1
MCD1YDL003W NIF3P53081 288 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms