RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B LPP1Q04396 274 aa-0.28□□□□□ -2.45
HTL1YCR020W-B FSF1Q12029 327 aaKnown RBP-0.28□□□□□ -2.45
HTL1YCR020W-B ATG40Q99325 256 aa-0.28□□□□□ -2.45
HTL1YCR020W-B RPL24AP04449 155 aaKnown RBP-0.29□□□□□ -2.46
HTL1YCR020W-B SEC11P15367 167 aa-0.29□□□□□ -2.46
HTL1YCR020W-B CUE4Q04201 117 aaPredicted RBP-0.29□□□□□ -2.46
HTL1YCR020W-B TSC3Q3E790 80 aa-0.29□□□□□ -2.46
HTL1YCR020W-B TIM9O74700 87 aa-0.3□□□□□ -2.46
HTL1YCR020W-B POL30P15873 258 aaKnown RBP-0.3□□□□□ -2.46
HTL1YCR020W-B OPI1P21957 404 aa-0.3□□□□□ -2.46
HTL1YCR020W-B KRR1P25586 316 aaPredicted RBP-0.3□□□□□ -2.46
HTL1YCR020W-B DOG2P38773 246 aa-0.3□□□□□ -2.46
HTL1YCR020W-B GVP36P40531 326 aaKnown RBP-0.3□□□□□ -2.46
HTL1YCR020W-B YFH7P43591 353 aa-0.3□□□□□ -2.46
HTL1YCR020W-B SWP1Q02795 286 aa-0.3□□□□□ -2.46
HTL1YCR020W-B GPM2Q12008 311 aa-0.3□□□□□ -2.46
HTL1YCR020W-B CDC36P06100 191 aaPredicted RBP-0.31□□□□□ -2.46
HTL1YCR020W-B CDC10P25342 322 aaKnown RBP-0.31□□□□□ -2.46
HTL1YCR020W-B POP4P38336 279 aa-0.31□□□□□ -2.46
HTL1YCR020W-B VMA22P38784 181 aa-0.31□□□□□ -2.46
HTL1YCR020W-B YAR1P46683 200 aa-0.31□□□□□ -2.46
HTL1YCR020W-B YMR252CQ04814 134 aa-0.31□□□□□ -2.46
HTL1YCR020W-B BTS1Q12051 335 aa-0.31□□□□□ -2.46
HTL1YCR020W-B YEL008WP40001 126 aa-0.32□□□□□ -2.46
HTL1YCR020W-B YLR460CP54007 376 aa-0.32□□□□□ -2.46
HTL1YCR020W-B MDM35O60200 86 aa-0.33□□□□□ -2.46
HTL1YCR020W-B SRB4P32569 687 aa-0.33□□□□□ -2.46
HTL1YCR020W-B YKL075CP36083 450 aa-0.33□□□□□ -2.46
HTL1YCR020W-B MRPL37P36532 105 aa-0.33□□□□□ -2.46
HTL1YCR020W-B YPL073CP40323 161 aa-0.33□□□□□ -2.46
HTL1YCR020W-B YML108WQ03759 105 aa-0.33□□□□□ -2.46
HTL1YCR020W-B SDO1Q07953 250 aaKnown RBP-0.33□□□□□ -2.46
HTL1YCR020W-B TCP1P12612 559 aaKnown RBP-0.34□□□□□ -2.46
HTL1YCR020W-B DAL80P26343 269 aa-0.34□□□□□ -2.46
HTL1YCR020W-B SKG1P36169 355 aa-0.34□□□□□ -2.46
HTL1YCR020W-B CSM4Q08955 156 aa-0.34□□□□□ -2.46
HTL1YCR020W-B YRA1Q12159 226 aaKnown RBP-0.34□□□□□ -2.46
HTL1YCR020W-B SHE2P36068 246 aaKnown RBP RIP-Chip data-0.35□□□□□ -2.47not detected
HTL1YCR020W-B YBR285WP38354 144 aa-0.35□□□□□ -2.47
HTL1YCR020W-B DID2P69771 204 aa-0.35□□□□□ -2.47
HTL1YCR020W-B YDR274CP87283 123 aa-0.35□□□□□ -2.47
HTL1YCR020W-B YPR174CQ06616 221 aaPredicted RBP-0.35□□□□□ -2.47
HTL1YCR020W-B TDA8Q6B2U8 126 aa-0.35□□□□□ -2.47
HTL1YCR020W-B TVP23P38962 199 aa-0.36□□□□□ -2.47
HTL1YCR020W-B LSO2Q3E772 92 aaKnown RBP-0.36□□□□□ -2.47
HTL1YCR020W-B COA3Q3E7B2 85 aa-0.36□□□□□ -2.47
HTL1YCR020W-B PRX1P34227 261 aaKnown RBP-0.37□□□□□ -2.47
HTL1YCR020W-B TRM9P49957 279 aa-0.37□□□□□ -2.47
HTL1YCR020W-B MCP1Q12106 302 aa-0.37□□□□□ -2.47
HTL1YCR020W-B DRS2P39524 1355 aa-0.37□□□□□ -2.47
HTL1YCR020W-B MSF1P08425 469 aa-0.38□□□□□ -2.47
HTL1YCR020W-B YIL102CP40488 101 aa-0.38□□□□□ -2.47
HTL1YCR020W-B YJR149WP47177 404 aa-0.38□□□□□ -2.47
HTL1YCR020W-B NSA1P53136 463 aaPredicted RBP-0.38□□□□□ -2.47
HTL1YCR020W-B FAS1P07149 2051 aaKnown RBP-0.38□□□□□ -2.47
HTL1YCR020W-B MRPL15P36523 253 aa-0.39□□□□□ -2.47
HTL1YCR020W-B PET100P38958 111 aa-0.39□□□□□ -2.47
HTL1YCR020W-B MCM22P47167 239 aa-0.39□□□□□ -2.47
HTL1YCR020W-B AHT1P29589 182 aa-0.4□□□□□ -2.47
HTL1YCR020W-B YHL037CP38733 133 aa-0.4□□□□□ -2.47
HTL1YCR020W-B YER034WP40022 185 aaKnown RBP-0.4□□□□□ -2.47
HTL1YCR020W-B YFL051CP43552 160 aa-0.4□□□□□ -2.47
HTL1YCR020W-B HOC1P47124 396 aa-0.4□□□□□ -2.47
HTL1YCR020W-B SEC17P32602 292 aa-0.41□□□□□ -2.48
HTL1YCR020W-B RPT5P33297 434 aaKnown RBP-0.41□□□□□ -2.48
HTL1YCR020W-B HPA3P39979 161 aa-0.41□□□□□ -2.48
HTL1YCR020W-B ERV25P54837 211 aaKnown RBP-0.41□□□□□ -2.48
HTL1YCR020W-B UPS3Q04006 179 aa-0.41□□□□□ -2.48
HTL1YCR020W-B YDR391CQ04170 232 aa-0.41□□□□□ -2.48
HTL1YCR020W-B RPL27AP0C2H6 136 aaKnown RBP-0.42□□□□□ -2.48
HTL1YCR020W-B MGM101P32787 269 aaKnown RBP-0.42□□□□□ -2.48
HTL1YCR020W-B RPB7P34087 171 aa-0.42□□□□□ -2.48
HTL1YCR020W-B UTP30P36144 274 aaKnown RBP-0.42□□□□□ -2.48
HTL1YCR020W-B ECM4P36156 370 aa-0.42□□□□□ -2.48
HTL1YCR020W-B CUE1P38428 203 aa-0.42□□□□□ -2.48
HTL1YCR020W-B YAR064WP39563 99 aa-0.42□□□□□ -2.48
HTL1YCR020W-B RTT105P40063 208 aa-0.42□□□□□ -2.48
HTL1YCR020W-B PRM8P53174 237 aa-0.42□□□□□ -2.48
HTL1YCR020W-B YPR203WQ08994 102 aa-0.42□□□□□ -2.48
HTL1YCR020W-B CCW12Q12127 133 aa-0.42□□□□□ -2.48
HTL1YCR020W-B YOL107WQ12239 342 aa-0.42□□□□□ -2.48
HTL1YCR020W-B HFA1P32874 2273 aa-0.43□□□□□ -2.48
HTL1YCR020W-B OM45P16547 393 aa-0.43□□□□□ -2.48
HTL1YCR020W-B MET31Q03081 177 aa-0.43□□□□□ -2.48
HTL1YCR020W-B YMR226CQ05016 267 aaKnown RBP-0.43□□□□□ -2.48
HTL1YCR020W-B URA5P13298 226 aaKnown RBP-0.44□□□□□ -2.48
HTL1YCR020W-B BET1P22804 142 aa-0.44□□□□□ -2.48
HTL1YCR020W-B SPO13P23624 291 aa-0.44□□□□□ -2.48
HTL1YCR020W-B YHL018WP38744 120 aaPredicted RBP-0.44□□□□□ -2.48
HTL1YCR020W-B NUP84P52891 726 aa-0.44□□□□□ -2.48
HTL1YCR020W-B LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.44□□□□□ -2.48not detected
HTL1YCR020W-B FIT2Q08906 153 aa-0.44□□□□□ -2.48
HTL1YCR020W-B YIL177CP40434 1758 aa-0.45□□□□□ -2.48
HTL1YCR020W-B YJL225CP40889 1758 aa-0.45□□□□□ -2.48
HTL1YCR020W-B CDC28P00546 298 aaKnown RBP-0.45□□□□□ -2.48
HTL1YCR020W-B AST2P39945 430 aaKnown RBP-0.45□□□□□ -2.48
HTL1YCR020W-B BNA7Q04066 261 aa-0.45□□□□□ -2.48
HTL1YCR020W-B YPR013CQ12145 317 aa-0.45□□□□□ -2.48
HTL1YCR020W-B ODC2Q99297 307 aa-0.45□□□□□ -2.48
HTL1YCR020W-B COX8P04039 78 aa-0.46□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms