RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W PML1Q07930 204 aaPredicted RBP5.67□□□□□ -1.5
SWD1YAR003W ENV7Q12003 364 aa5.67□□□□□ -1.5
SWD1YAR003W ARG80P07249 177 aa5.66□□□□□ -1.5
SWD1YAR003W GRX2P17695 143 aaKnown RBP5.66□□□□□ -1.5
SWD1YAR003W PPQ1P32945 549 aa5.66□□□□□ -1.5
SWD1YAR003W POP8P38208 133 aa5.66□□□□□ -1.5
SWD1YAR003W ECM14P38836 430 aa5.66□□□□□ -1.5
SWD1YAR003W GWT1P47026 490 aa5.66□□□□□ -1.5
SWD1YAR003W SOL1P50278 321 aa5.66□□□□□ -1.5
SWD1YAR003W SMX3P54999 86 aaPredicted RBP5.66□□□□□ -1.5
SWD1YAR003W MEH1Q02205 184 aa5.66□□□□□ -1.5
SWD1YAR003W NGL2Q03264 515 aaKnown RBP5.66□□□□□ -1.5
SWD1YAR003W VAM3Q12241 283 aa5.66□□□□□ -1.5
SWD1YAR003W CDC39P25655 2108 aaKnown RBP5.66□□□□□ -1.5
SWD1YAR003W GAL1P04385 528 aa5.65□□□□□ -1.5
SWD1YAR003W DAL80P26343 269 aa5.65□□□□□ -1.5
SWD1YAR003W OCH1P31755 480 aa5.65□□□□□ -1.5
SWD1YAR003W MNS1P32906 549 aa5.65□□□□□ -1.5
SWD1YAR003W FLO10P36170 1169 aa5.65□□□□□ -1.5
SWD1YAR003W NTC20P38302 140 aaPredicted RBP5.65□□□□□ -1.5
SWD1YAR003W YHL044WP38727 235 aa5.65□□□□□ -1.5
SWD1YAR003W RRF1P38771 230 aa5.65□□□□□ -1.5
SWD1YAR003W YNL046WP53956 172 aa5.65□□□□□ -1.5
SWD1YAR003W YLR224WQ05947 369 aa5.65□□□□□ -1.5
SWD1YAR003W YTH1Q06102 208 aaPredicted RBP5.65□□□□□ -1.5
SWD1YAR003W SYM1Q06563 197 aa5.65□□□□□ -1.5
SWD1YAR003W GAT3Q07928 141 aa5.65□□□□□ -1.5
SWD1YAR003W MPD1Q12404 318 aaKnown RBP5.65□□□□□ -1.5
SWD1YAR003W SPO24Q3E752 67 aa5.65□□□□□ -1.5
SWD1YAR003W RPL39P04650 51 aa5.64□□□□□ -1.51
SWD1YAR003W RPP2AP05319 106 aaKnown RBP5.64□□□□□ -1.51
SWD1YAR003W OLE1P21147 510 aaKnown RBP5.64□□□□□ -1.51
SWD1YAR003W TRR1P29509 319 aaKnown RBP5.64□□□□□ -1.51
SWD1YAR003W YOX1P34161 385 aa5.64□□□□□ -1.51
SWD1YAR003W UTP30P36144 274 aaKnown RBP5.64□□□□□ -1.51
SWD1YAR003W RMD6P39975 231 aa5.64□□□□□ -1.51
SWD1YAR003W YGR210CP42942 411 aa5.64□□□□□ -1.51
SWD1YAR003W RPA34P47006 233 aaPredicted RBP5.64□□□□□ -1.51
SWD1YAR003W HAM1P47119 197 aaKnown RBP5.64□□□□□ -1.51
SWD1YAR003W OKP1P53298 406 aa5.64□□□□□ -1.51
SWD1YAR003W FIT1Q04433 528 aa5.64□□□□□ -1.51
SWD1YAR003W ECM18Q04623 453 aa5.64□□□□□ -1.51
SWD1YAR003W RTT103Q05543 409 aa5.64□□□□□ -1.51
SWD1YAR003W COA4Q05809 96 aa5.64□□□□□ -1.51
SWD1YAR003W TMA10Q06177 86 aa5.64□□□□□ -1.51
SWD1YAR003W PRP11Q07350 266 aaPredicted RBP5.64□□□□□ -1.51
SWD1YAR003W YLR108CQ12259 485 aa5.64□□□□□ -1.51
SWD1YAR003W YLR365WQ7LIF2 110 aa5.64□□□□□ -1.51
SWD1YAR003W SEN2P16658 377 aa5.63□□□□□ -1.51
SWD1YAR003W FUS3P16892 353 aaKnown RBP5.63□□□□□ -1.51
SWD1YAR003W ACB1P31787 87 aa5.63□□□□□ -1.51
SWD1YAR003W YUH1P35127 236 aa5.63□□□□□ -1.51
SWD1YAR003W SWD3P38123 315 aa5.63□□□□□ -1.51
SWD1YAR003W YER137CP40083 148 aaKnown RBP5.63□□□□□ -1.51
SWD1YAR003W GON7P46984 123 aa5.63□□□□□ -1.51
SWD1YAR003W XPT1P47165 209 aa5.63□□□□□ -1.51
SWD1YAR003W TSA2Q04120 196 aa5.63□□□□□ -1.51
SWD1YAR003W CAC2Q04199 468 aa5.63□□□□□ -1.51
SWD1YAR003W DPB4Q04603 196 aaKnown RBP5.63□□□□□ -1.51
SWD1YAR003W IRC25Q07951 179 aa5.63□□□□□ -1.51
SWD1YAR003W YOL029CQ08187 201 aa5.63□□□□□ -1.51
SWD1YAR003W ATP16Q12165 160 aa5.63□□□□□ -1.51
SWD1YAR003W FRE8Q12209 686 aa5.63□□□□□ -1.51
SWD1YAR003W MAG1P22134 296 aaKnown RBP5.62□□□□□ -1.51
SWD1YAR003W MIR1P23641 311 aaKnown RBP5.62□□□□□ -1.51
SWD1YAR003W RPB7P34087 171 aa5.62□□□□□ -1.51
SWD1YAR003W YKL187CP34231 750 aa5.62□□□□□ -1.51
SWD1YAR003W PAC2P39937 518 aa5.62□□□□□ -1.51
SWD1YAR003W RPL13BP40212 199 aaKnown RBP5.62□□□□□ -1.51
SWD1YAR003W SGN1P40561 250 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
SWD1YAR003W ECM27P47144 725 aa5.62□□□□□ -1.51
SWD1YAR003W UBP8P50102 471 aa5.62□□□□□ -1.51
SWD1YAR003W SBH2P52871 88 aa5.62□□□□□ -1.51
SWD1YAR003W GEP7P53171 287 aa5.62□□□□□ -1.51
SWD1YAR003W HSK3P69852 69 aa5.62□□□□□ -1.51
SWD1YAR003W YDR114CQ04597 100 aa5.62□□□□□ -1.51
SWD1YAR003W RIM9Q04734 239 aa5.62□□□□□ -1.51
SWD1YAR003W NOC4Q06512 552 aaPredicted RBP5.62□□□□□ -1.51
SWD1YAR003W RFM1Q12192 310 aa5.62□□□□□ -1.51
SWD1YAR003W RPL13AQ12690 199 aaPredicted RBP5.62□□□□□ -1.51
SWD1YAR003W LSO2Q3E772 92 aaKnown RBP5.62□□□□□ -1.51
SWD1YAR003W GDH1P07262 454 aaKnown RBP5.61□□□□□ -1.51
SWD1YAR003W PUT1P09368 476 aa5.61□□□□□ -1.51
SWD1YAR003W SSO2P39926 295 aa5.61□□□□□ -1.51
SWD1YAR003W GAT2P40209 560 aa5.61□□□□□ -1.51
SWD1YAR003W PRM5P40476 318 aa5.61□□□□□ -1.51
SWD1YAR003W SLM1P40485 686 aa5.61□□□□□ -1.51
SWD1YAR003W YIR035CP40579 254 aa5.61□□□□□ -1.51
SWD1YAR003W TTI2P47168 421 aa5.61□□□□□ -1.51
SWD1YAR003W NIF3P53081 288 aa5.61□□□□□ -1.51
SWD1YAR003W SMM1P53720 384 aaKnown RBP5.61□□□□□ -1.51
SWD1YAR003W YNR064CP53750 290 aa5.61□□□□□ -1.51
SWD1YAR003W TEX1P53851 422 aaKnown RBP5.61□□□□□ -1.51
SWD1YAR003W THI74Q04083 370 aa5.61□□□□□ -1.51
SWD1YAR003W YFH1Q07540 174 aa5.61□□□□□ -1.51
SWD1YAR003W DGK1Q12382 290 aa5.61□□□□□ -1.51
SWD1YAR003W MEC1P38111 2368 aa5.6□□□□□ -1.51
SWD1YAR003W TPI1P00942 248 aaKnown RBP5.6□□□□□ -1.51
SWD1YAR003W QCR2P07257 368 aa5.6□□□□□ -1.51
SWD1YAR003W LSB5P25369 354 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 101.2 ms