RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	UBI4	P0CG63	381 aa	Known RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	SCL1	P21243	252 aa	Known RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	MAG1	P22134	296 aa	Known RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	YGP1	P38616	354 aa	Known RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	APQ12	P40532	138 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	YFL067W	P43537	175 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	BUD13	P46947	266 aa	Predicted RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	YJR085C	P47131	105 aa	Known RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	SOL1	P50278	321 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	SDT1	P53078	280 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	YGR050C	P53231	118 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	LSM3	P57743	89 aa	Known RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	YMR320W	Q04897	101 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	PAL1	Q05518	499 aa	Known RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	PRP11	Q07350	266 aa	Predicted RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	TIR4	Q12218	487 aa	Predicted RBP	4.09	□□□□□ -1.75
ECM1	YAL059W	YIR021W-A	Q3E739	70 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	YMR230W-A	Q3E7B5	62 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	NAG1	Q8TGN9	163 aa		4.09	□□□□□ -1.75
ECM1	YAL059W	YOR304C-A	O14468	76 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	BGL2	P15703	313 aa	Known RBP	4.08	□□□□□ -1.76
ECM1	YAL059W	MRPL24	P36525	258 aa	Predicted RBP	4.08	□□□□□ -1.76
ECM1	YAL059W	PHO89	P38361	574 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	MED6	P38782	295 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	RGI1	P40043	161 aa	Predicted RBP	4.08	□□□□□ -1.76
ECM1	YAL059W	PRM5	P40476	318 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	GLC8	P41818	229 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	ARO8	P53090	500 aa	Known RBP	4.08	□□□□□ -1.76
ECM1	YAL059W	PDR18	P53756	1333 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	RNH201	P53942	307 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	FMN1	Q03778	218 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	VHS1	Q03785	461 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	TSA2	Q04120	196 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	HRD1	Q08109	551 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	YPL225W	Q08971	146 aa	Known RBP	4.08	□□□□□ -1.76
ECM1	YAL059W	DAS2	Q12084	232 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	ATP14	Q12349	124 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	MPD1	Q12404	318 aa	Known RBP	4.08	□□□□□ -1.76
ECM1	YAL059W	YPR014C	Q6B0W2	109 aa		4.08	□□□□□ -1.76
ECM1	YAL059W	NUP157	P40064	1391 aa	Known RBP	4.07	□□□□□ -1.76
ECM1	YAL059W	YCR101C	P25607	182 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	SMP1	P38128	452 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	POP4	P38336	279 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	PTI1	P39927	425 aa	Predicted RBP	4.07	□□□□□ -1.76
ECM1	YAL059W	AST2	P39945	430 aa	Known RBP	4.07	□□□□□ -1.76
ECM1	YAL059W	YER186C	P40101	306 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	YGR015C	P53208	328 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	TIM13	P53299	105 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	TRM12	Q04235	462 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	YTH1	Q06102	208 aa	Predicted RBP	4.07	□□□□□ -1.76
ECM1	YAL059W	IES4	Q08561	116 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	GEP5	Q12393	293 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	TY1B-H	O13535	1793 aa		4.07	□□□□□ -1.76
ECM1	YAL059W	RPL15A	P05748	204 aa	Known RBP	4.06	□□□□□ -1.76
ECM1	YAL059W	RPB5	P20434	215 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	CNB1	P25296	175 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	YHI9	P38765	294 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	RPR2	P40571	144 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	STB1	P42845	420 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	ERJ5	P43613	295 aa	Predicted RBP	4.06	□□□□□ -1.76
ECM1	YAL059W	WSC2	P53832	503 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	YNL010W	P53981	241 aa	Known RBP	4.06	□□□□□ -1.76
ECM1	YAL059W	RUB1	Q03919	77 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	YLR179C	Q06252	201 aa	Known RBP	4.06	□□□□□ -1.76
ECM1	YAL059W	LDB18	Q07887	179 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	YPR011C	Q12251	326 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	PRR2	Q12310	699 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	TDA8	Q6B2U8	126 aa		4.06	□□□□□ -1.76
ECM1	YAL059W	STP22	P25604	385 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	ATS1	P31386	333 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	ERG2	P32352	222 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	RPS20	P38701	121 aa	Known RBP	4.05	□□□□□ -1.76
ECM1	YAL059W	VMA7	P39111	118 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	RFC2	P40348	353 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	OST2	P46964	130 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	ARP3	P47117	449 aa	Known RBP	4.05	□□□□□ -1.76
ECM1	YAL059W	FMP48	P53233	369 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	CRH1	P53301	507 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	PGA1	P53896	198 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	COF1	Q03048	143 aa	Known RBP	4.05	□□□□□ -1.76
ECM1	YAL059W	ERP1	Q05359	219 aa	Known RBP	4.05	□□□□□ -1.76
ECM1	YAL059W	TSC3	Q3E790	80 aa		4.05	□□□□□ -1.76
ECM1	YAL059W	RPS1B	P23248	255 aa	Known RBP	4.04	□□□□□ -1.76
ECM1	YAL059W	SPO13	P23624	291 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	SFC1	P33303	322 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	YBR063C	P38083	404 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	SHE1	P38200	338 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	TIM17	P39515	158 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	PGD1	P40356	397 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	BIR1	P47134	954 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	BNS1	P50084	137 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	UFD1	P53044	361 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	HHO1	P53551	258 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	BOR1	P53838	576 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	GAS3	Q03655	524 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	NKP2	Q06162	153 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	CNL1	Q06333	122 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	FYV7	Q12247	151 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	YPS3	Q12303	508 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	RPL21B	Q12672	160 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms