RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ZFP14Q9HCL3 533 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 AVENQ9NQS1 362 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-202ENST00000562722 NCDNQ9UBB6 729 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 TUBGCP4Q9UGJ1 667 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 KCNG1Q9UIX4 513 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
SF3B3-202ENST00000562722 SPTBN4Q9H254 2564 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 ABLIM1O14639 778 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 SPTLC1O15269 473 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 CLDN3O15551 220 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 MYL4P12829 197 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 PLS3P13797 630 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 GUCY2CP25092 1073 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 SPAG1Q07617 926 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 TWF1Q12792 350 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 IL17AQ16552 155 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 FAM78AQ5JUQ0 283 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 PRSS36Q5K4E3 855 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 DGLUCYQ7Z3D6 616 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 SPIRE2Q8WWL2 714 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 DDX12PQ92771 950 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 DNASE1L2Q92874 299 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 TRMT61BQ9BVS5 477 aaKnown RBP14.17□□□□□ -0.14
SF3B3-202ENST00000562722 SLITRK6Q9H5Y7 841 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 ASAH2Q9NR71 780 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 AFF4Q9UHB7 1163 aaKnown RBP14.17□□□□□ -0.14
SF3B3-202ENST00000562722 NDRG2Q9UN36 371 aaKnown RBP14.17□□□□□ -0.14
SF3B3-202ENST00000562722 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 PCDHGA2Q9Y5H1 932 aa14.17□□□□□ -0.14
SF3B3-202ENST00000562722 MIA3Q5JRA6 1907 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 MAN2B1O00754 1011 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 TBC1D4O60343 1298 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 CXCL8P10145 99 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 MAPTP10636 758 aaKnown RBP14.16□□□□□ -0.14
SF3B3-202ENST00000562722 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
SF3B3-202ENST00000562722 MRPL58Q14197 206 aaKnown RBP14.16□□□□□ -0.14
SF3B3-202ENST00000562722 SLC10A6Q3KNW5 377 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 TSSK4Q6SA08 328 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 USP37Q86T82 979 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 SUMF1Q8NBK3 374 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 TMEM161BQ8NDZ6 487 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 SMARCD2Q92925 531 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 IRF7Q92985 503 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 SECISBP2LQ93073 1101 aaKnown RBP14.16□□□□□ -0.14
SF3B3-202ENST00000562722 KIF12Q96FN5 646 aa14.16□□□□□ -0.14
SF3B3-202ENST00000562722 MMTAG2Q9BU76 263 aaKnown RBP14.16□□□□□ -0.14
SF3B3-202ENST00000562722 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.16□□□□□ -0.14
SF3B3-202ENST00000562722 VWA3AA6NCI4 1184 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 MEFVO15553 781 aaPredicted RBP14.15□□□□□ -0.14
SF3B3-202ENST00000562722 MICAL2O94851 1124 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 CLTAP09496 248 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 GJA1P17302 382 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 FCARP24071 287 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 GDI1P31150 447 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 CCR2P41597 374 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 RPS9P46781 194 aaKnown RBP14.15□□□□□ -0.14
SF3B3-202ENST00000562722 YWHAHQ04917 246 aaPredicted RBP14.15□□□□□ -0.14
SF3B3-202ENST00000562722 PPP2R3AQ06190 1150 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 PUM1Q14671 1186 aaKnown RBP eCLIP14.15□□□□□ -0.14
SF3B3-202ENST00000562722 RILPL1Q5EBL4 403 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 POTEHQ6S545 545 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 ZPBP2Q6X784 338 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 DSTYKQ6XUX3 929 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 RNF19BQ6ZMZ0 732 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 LEMD2Q8NC56 503 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 ZSCAN18Q8TBC5 510 aaPredicted RBP14.15□□□□□ -0.14
SF3B3-202ENST00000562722 CLDN23Q96B33 292 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 ASB16Q96NS5 453 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 PGLYRP2Q96PD5 576 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 NTPCRQ9BSD7 190 aaKnown RBP14.15□□□□□ -0.14
SF3B3-202ENST00000562722 ZSCAN32Q9NX65 697 aa14.15□□□□□ -0.14
SF3B3-202ENST00000562722 TIMM13Q9Y5L4 95 aaPredicted RBP14.15□□□□□ -0.14
SF3B3-202ENST00000562722 NOTCH4Q99466 2003 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 NPHP3-ACAD11A0A0J9YXS1 232 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 H0YCG3 227 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 H3BQV1 296 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 PLA2G4BP0C869 781 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 PSMC3P17980 439 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 VIPR2P41587 438 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 LIG4P49917 911 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 ATP2C1P98194 919 aaPredicted RBP14.14□□□□□ -0.15
SF3B3-202ENST00000562722 MCL1Q07820 350 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 MTAPQ13126 283 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 PLD1Q13393 1074 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 TEAD2Q15562 447 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 ERICH6BQ5W0A0 696 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 YAF2Q8IY57 180 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 TMEM130Q8N3G9 435 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 SYT2Q8N9I0 419 aaPredicted RBP14.14□□□□□ -0.15
SF3B3-202ENST00000562722 BORCS6Q96GS4 357 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 ZSWIM3Q96MP5 696 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 PNMA5Q96PV4 448 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 PLEKHA5Q9HAU0 1116 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 CEP72Q9P209 647 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 LARSQ9P2J5 1176 aaKnown RBP14.14□□□□□ -0.15
SF3B3-202ENST00000562722 MAFFQ9ULX9 164 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 UBQLN1Q9UMX0 589 aaKnown RBP14.14□□□□□ -0.15
SF3B3-202ENST00000562722 SMG5Q9UPR3 1016 aaKnown RBP14.14□□□□□ -0.15
SF3B3-202ENST00000562722 YIPF1Q9Y548 306 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms