RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZNF516Q92618 1163 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 ZNF689Q96CS4 500 aaPredicted RBP17.83■□□□□ 0.45
TPM1-219ENST00000559397 CGRRF1Q99675 332 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 MTIF3Q9H2K0 278 aaKnown RBP17.83■□□□□ 0.45
TPM1-219ENST00000559397 SLC4A7Q9Y6M7 1214 aa17.83■□□□□ 0.45
TPM1-219ENST00000559397 PDE4DIPQ5VU43 2346 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 GOLGA6L9A6NEM1 432 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 LRRC53A6NM62 1247 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 DLATP10515 647 aaKnown RBP17.83■□□□□ 0.44
TPM1-219ENST00000559397 BMP8BP34820 402 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 SCNN1GP51170 649 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 POLR2FP61218 127 aaKnown RBP17.83■□□□□ 0.44
TPM1-219ENST00000559397 APBA1Q02410 837 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 NAB2Q15742 525 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 GLRA4Q5JXX5 417 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 CACNA2D4Q7Z3S7 1137 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 NT5DC4Q86YG4 428 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 WDR49Q8IV35 697 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 C16orf45Q96MC5 204 aaPredicted RBP17.83■□□□□ 0.44
TPM1-219ENST00000559397 PPP1R10Q96QC0 940 aaKnown RBP17.83■□□□□ 0.44
TPM1-219ENST00000559397 FNBP1Q96RU3 617 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 TSPAN18Q96SJ8 248 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 SLC9A7Q96T83 725 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 UBE2OQ9C0C9 1292 aaKnown RBP17.83■□□□□ 0.44
TPM1-219ENST00000559397 TMEM117Q9H0C3 514 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 GCNT4Q9P109 453 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 DERAQ9Y315 318 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 C2CD2Q9Y426 696 aa17.83■□□□□ 0.44
TPM1-219ENST00000559397 EPN1Q9Y6I3 576 aaPredicted RBP17.83■□□□□ 0.44
TPM1-219ENST00000559397 TDRD15B5MCY1 1934 aaKnown RBP17.82■□□□□ 0.44
TPM1-219ENST00000559397 N4BP1O75113 896 aaKnown RBP17.82■□□□□ 0.44
TPM1-219ENST00000559397 GJB5O95377 273 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 CCDC175P0C221 793 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 UCHL3P15374 230 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 PPP3CAQ08209 521 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 NOMO2Q5JPE7 1267 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 LMBRD2Q68DH5 695 aaPredicted RBP17.82■□□□□ 0.44
TPM1-219ENST00000559397 CCDC170Q8IYT3 715 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 OR5B17Q8NGF7 314 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 RSPH1Q8WYR4 309 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 KIF12Q96FN5 646 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 FAM84AQ96KN4 292 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 RPS6KC1Q96S38 1066 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 DESI2Q9BSY9 194 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 NLRC4Q9NPP4 1024 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 MYO6Q9UM54 1294 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 INPP5FQ9Y2H2 1132 aa17.82■□□□□ 0.44
TPM1-219ENST00000559397 NDUFA10O95299 355 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 POMCP01189 267 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 THP07101 528 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 TNNT1P13805 278 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 TNNI1P19237 187 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 MYL7Q01449 175 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 TMEM132DQ14C87 1099 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 FAM117BQ6P1L5 589 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 TRIM65Q6PJ69 517 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 USP37Q86T82 979 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 HERC6Q8IVU3 1022 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 ABI1Q8IZP0 508 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 LMO3Q8TAP4 145 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 RNPC3Q96LT9 517 aaKnown RBP17.81■□□□□ 0.44
TPM1-219ENST00000559397 TBC1D13Q9NVG8 400 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 AIPL1Q9NZN9 384 aa17.81■□□□□ 0.44
TPM1-219ENST00000559397 TBKBP1A7MCY6 615 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 KIF2AO00139 706 aaPredicted RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 TULP1O00294 542 aaPredicted RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 C4BPAP04003 597 aaKnown RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 ATP2A2P16615 1042 aaKnown RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 GTF2H1P32780 548 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 HTRA4P83105 476 aaPredicted RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 GRIK3Q13003 919 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 DUOXA2Q1HG44 320 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 C15orf39Q6ZRI6 1047 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 TMEM130Q8N3G9 435 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 URGCPQ8TCY9 931 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 C18orf25Q96B23 403 aaPredicted RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 NHEJ1Q9H9Q4 299 aaPredicted RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 ARHGAP20Q9P2F6 1191 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 KANSL3Q9P2N6 904 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 DAAM1Q9Y4D1 1078 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 TUBB4AP04350 444 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 TFAMQ00059 246 aaKnown RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 SOX4Q06945 474 aaPredicted RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 DNTTIP2Q5QJE6 756 aaKnown RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 HGSNATQ68CP4 663 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 MTMR12Q9C0I1 747 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 INTS2Q9H0H0 1204 aaKnown RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 PRO3102Q9H379 93 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 TUBGCP4Q9UGJ1 667 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 UBQLN1Q9UMX0 589 aaKnown RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 REXO2Q9Y3B8 237 aaKnown RBP17.8■□□□□ 0.44
TPM1-219ENST00000559397 FHOD1Q9Y613 1164 aa17.8■□□□□ 0.44
TPM1-219ENST00000559397 EIF3CLB5ME19 914 aaKnown RBP17.79■□□□□ 0.44
TPM1-219ENST00000559397 DDHD2O94830 711 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 CYP3A5P20815 502 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 CYLC1P35663 651 aaPredicted RBP17.79■□□□□ 0.44
TPM1-219ENST00000559397 GCLMP48507 274 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 AP3M2P53677 418 aa17.79■□□□□ 0.44
TPM1-219ENST00000559397 JAM2P57087 298 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms