RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CRELD2Q6UXH1 353 aaPredicted RBP24.62■■□□□ 1.53
PABPN1-207ENST00000556821 SPATA31D4Q6ZUB0 917 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 KIF12Q96FN5 646 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 RPGRIP1Q96KN7 1286 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 SPATA32Q96LK8 384 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 ACCSQ96QU6 501 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 C7orf25Q9BPX7 421 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 MTRRQ9UBK8 725 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 KCNH3Q9ULD8 1083 aa24.62■■□□□ 1.53
PABPN1-207ENST00000556821 PRPF6O94906 941 aaKnown RBP24.61■■□□□ 1.53
PABPN1-207ENST00000556821 LRPAP1P30533 357 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 MTHFRP42898 656 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 GUCY2FP51841 1108 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 AMPD3Q01432 767 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 EHHADHQ08426 723 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 PTPN21Q16825 1174 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 GPR149Q86SP6 731 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 POMGNT1Q8WZA1 660 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 RIPOR3Q96MK2 946 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 NECTIN4Q96NY8 510 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 UBQLN1Q9UMX0 589 aaKnown RBP24.61■■□□□ 1.53
PABPN1-207ENST00000556821 EXOC7Q9UPT5 735 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 PCDHB13Q9Y5F0 798 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 KMT2EQ8IZD2 1858 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 CACNA1AO00555 2505 aa24.61■■□□□ 1.53
PABPN1-207ENST00000556821 TRAPPC3O43617 180 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 ACTN4O43707 911 aaKnown RBP24.6■■□□□ 1.53
PABPN1-207ENST00000556821 RFPL2O75678 378 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 PAPLNO95428 1278 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 NFICP08651 508 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 CYP3A5P20815 502 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 JADE1Q6IE81 842 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 RSPO2Q6UXX9 243 aaPredicted RBP24.6■■□□□ 1.53
PABPN1-207ENST00000556821 ZSWIM2Q8NEG5 633 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 CMASQ8NFW8 434 aaPredicted RBP24.6■■□□□ 1.53
PABPN1-207ENST00000556821 BLZF1Q9H2G9 400 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 SERTAD1Q9UHV2 236 aa24.6■■□□□ 1.53
PABPN1-207ENST00000556821 SPTBN4Q9H254 2564 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 SPDYE4A6NLX3 237 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 PDGFBP01127 241 aaPredicted RBP24.59■■□□□ 1.53
PABPN1-207ENST00000556821 PFKFB1P16118 471 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 SP100P23497 879 aaPredicted RBP24.59■■□□□ 1.53
PABPN1-207ENST00000556821 CMA1P23946 247 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 HOXD13P35453 343 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 ATAT1Q5SQI0 421 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 PDXDC1Q6P996 788 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 C15orf39Q6ZRI6 1047 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 CD302Q8IX05 232 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 GRAMD1CQ8IYS0 662 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 HDAC7Q8WUI4 952 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 FAM212AQ96EL1 285 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 SUSD3Q96L08 255 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 TSPAN18Q96SJ8 248 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 FBXW11Q9UKB1 542 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 HPSEQ9Y251 543 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 NUB1Q9Y5A7 615 aa24.59■■□□□ 1.53
PABPN1-207ENST00000556821 RIF1Q5UIP0 2472 aaKnown RBP24.59■■□□□ 1.53
PABPN1-207ENST00000556821 A0A1B0GVL5 298 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 PPEF2O14830 753 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 MCM4P33991 863 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 AFMP43652 599 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 CUL4BQ13620 913 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 POSTNQ15063 836 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 VARS2Q5ST30 1063 aaKnown RBP24.58■■□□□ 1.53
PABPN1-207ENST00000556821 SPATA1Q5VX52 437 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 UNC13DQ70J99 1090 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 EPM2AIP1Q7L775 607 aaPredicted RBP24.58■■□□□ 1.53
PABPN1-207ENST00000556821 KREMEN2Q8NCW0 462 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 ZNF707Q96C28 371 aaPredicted RBP24.58■■□□□ 1.53
PABPN1-207ENST00000556821 PYM1Q9BRP8 204 aaKnown RBP24.58■■□□□ 1.53
PABPN1-207ENST00000556821 CBWD1Q9BRT8 395 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 PLEKHA4Q9H4M7 779 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 ATP6V1DQ9Y5K8 247 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.58■■□□□ 1.53
PABPN1-207ENST00000556821 BACE2Q9Y5Z0 518 aa24.58■■□□□ 1.53
PABPN1-207ENST00000556821 MYO15AQ9UKN7 3530 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.57■■□□□ 1.52
PABPN1-207ENST00000556821 SYN3O14994 580 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 OR1D2P34982 312 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 AARSP49588 968 aaKnown RBP eCLIP24.57■■□□□ 1.528e-7■■□□□ 12.8
PABPN1-207ENST00000556821 WNT7BP56706 349 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 POU5F1Q01860 360 aaKnown RBP24.57■■□□□ 1.52
PABPN1-207ENST00000556821 RAB33AQ14088 237 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 FAM26FQ5R3K3 315 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 ANKS3Q6ZW76 656 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 SYCP3Q8IZU3 236 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 SAAL1Q96ER3 474 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 ASB7Q9H672 318 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 DPP7Q9UHL4 492 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 CDY1Q9Y6F8 540 aa24.57■■□□□ 1.52
PABPN1-207ENST00000556821 FAM237AA0A1B0GTK4 181 aa24.56■■□□□ 1.52
PABPN1-207ENST00000556821 CCDC195A0A1B0GUA6 201 aa24.56■■□□□ 1.52
PABPN1-207ENST00000556821 XPOTO43592 962 aaKnown RBP24.56■■□□□ 1.52
PABPN1-207ENST00000556821 SLFN14P0C7P3 912 aa24.56■■□□□ 1.52
PABPN1-207ENST00000556821 GARTP22102 1010 aa24.56■■□□□ 1.52
PABPN1-207ENST00000556821 TMEM132DQ14C87 1099 aa24.56■■□□□ 1.52
PABPN1-207ENST00000556821 EFCAB13Q8IY85 973 aa24.56■■□□□ 1.52
PABPN1-207ENST00000556821 RHOBTB2Q9BYZ6 727 aa24.56■■□□□ 1.52
PABPN1-207ENST00000556821 SCAND2PQ9GZW5 306 aaPredicted RBP24.56■■□□□ 1.52
PABPN1-207ENST00000556821 TMEM206Q9H813 350 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms