RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 ATG4CQ96DT6 458 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 RAB3IPQ96QF0 476 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 MKNK1Q9BUB5 465 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 CEP350Q5VT06 3117 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 GJB6O95452 261 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 GGPS1O95749 300 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 ERFP50548 548 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 KAZNQ674X7 775 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 MIS18BP1Q6P0N0 1132 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 EPS8L1Q8TE68 723 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 EXOC1LA0A1B0GW35 172 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 TBX3O15119 743 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 PTPRAP18433 802 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 TAC1P20366 129 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 EPHB2P29323 1055 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 ABL2P42684 1182 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 SIX1Q15475 284 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 TAB3Q8N5C8 712 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 FEM1BQ9UK73 627 aa13.13□□□□□ -0.31
HDAC7-230ENST00000552960 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-230ENST00000552960 SSC5DA1L4H1 1573 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 O00370 1275 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 ENTPD5O75356 428 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 SMNDC1O75940 238 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■□□□ 12.6
HDAC7-230ENST00000552960 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 ALADP13716 330 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 ITIH2P19823 946 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 LMO3Q8TAP4 145 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 SPIRE2Q8WWL2 714 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 UTP4Q969X6 686 aaKnown RBP13.12□□□□□ -0.31
HDAC7-230ENST00000552960 MAGEB18Q96M61 343 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 HSD17B14Q9BPX1 270 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 HERPUD2Q9BSE4 406 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 KIAA1683Q9H0B3 1180 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 TXLNGQ9NUQ3 528 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 DCTN4Q9UJW0 460 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 PHTF1Q9UMS5 762 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
HDAC7-230ENST00000552960 CDH16O75309 829 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 RRM1P23921 792 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 MTFR1Q15390 333 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 MBOAT7Q96N66 472 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 LXNQ9BS40 222 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 PPP1R12CQ9BZL4 782 aa13.12□□□□□ -0.31
HDAC7-230ENST00000552960 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
HDAC7-230ENST00000552960 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-230ENST00000552960 CA4P22748 312 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 CCDC6Q16204 474 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 TNFAIP8L3Q5GJ75 292 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 ASRGL1Q7L266 308 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 CPA5Q8WXQ8 436 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 VPS37BQ9H9H4 285 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 SAYSD1Q9NPB0 183 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 SMIM24O75264 130 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 RALAP11233 206 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 CTCFP49711 727 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-230ENST00000552960 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
HDAC7-230ENST00000552960 MXRA7P84157 204 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 FMO1Q01740 532 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 IZUMO3Q5VZ72 239 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 PPP1R21Q6ZMI0 780 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 GPC2Q8N158 579 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 NACC1Q96RE7 527 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.316e-8■□□□□ 9.1
HDAC7-230ENST00000552960 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 ZCWPW1Q9H0M4 648 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
HDAC7-230ENST00000552960 WHRNQ9P202 907 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 TMEM150BA6NC51 233 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 FAM47DPA6NHR8 397 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 TP73O15350 636 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 ITGB5P18084 799 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 GRIK3Q13003 919 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 SEPT7Q16181 437 aaKnown RBP13.11□□□□□ -0.31
HDAC7-230ENST00000552960 MOXD1Q6UVY6 613 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 LRRC8CQ8TDW0 803 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 KREMEN1Q96MU8 473 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 PI4K2AQ9BTU6 479 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 TOPORSQ9NS56 1045 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-230ENST00000552960 DMAC2Q9NW81 257 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 ZFATQ9P243 1243 aa13.11□□□□□ -0.31
HDAC7-230ENST00000552960 CHKBQ9Y259 395 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms