RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PFKPQ01813 784 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 PRKCQQ04759 706 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 MAPK7Q13164 816 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 MLF2Q15773 248 aaPredicted RBP9.35□□□□□ -0.91
PRKCB-208ENST00000487674 OTOGLQ3ZCN5 2332 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 MPZL3Q6UWV2 235 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 ALKAL1Q6UXT8 129 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 RSPO2Q6UXX9 243 aaPredicted RBP9.35□□□□□ -0.91
PRKCB-208ENST00000487674 TAS1R3Q7RTX0 852 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 C1orf210Q8IVY1 113 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 KXD1Q9BQD3 176 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 DDX23Q9BUQ8 820 aaKnown RBP9.35□□□□□ -0.91
PRKCB-208ENST00000487674 RUSC1Q9BVN2 902 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 TIPINQ9BVW5 301 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 AVENQ9NQS1 362 aaPredicted RBP9.35□□□□□ -0.91
PRKCB-208ENST00000487674 HCFC1R1Q9NWW0 138 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 GDE1Q9NZC3 331 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 CNTN3Q9P232 1028 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 DNMT3BQ9UBC3 853 aaKnown RBP9.35□□□□□ -0.91
PRKCB-208ENST00000487674 MRPS23Q9Y3D9 190 aaKnown RBP9.35□□□□□ -0.91
PRKCB-208ENST00000487674 PCDHB6Q9Y5E3 794 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 ZNF292O60281 2723 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 COL4A3Q01955 1670 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
PRKCB-208ENST00000487674 CACNA1IQ9P0X4 2223 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 KANSL1LA0AUZ9 987 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 WDR27A2RRH5 827 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 PP2D1A8MPX8 630 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 H7C4K7 107 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ECI2O75521 394 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ABLIM3O94929 683 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 LRG1P02750 347 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 RHOP08100 348 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 SP9P0CG40 484 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 GLULP15104 373 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 GUCY2CP25092 1073 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
PRKCB-208ENST00000487674 OSTNP61366 133 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 SNW1Q13573 536 aaKnown RBP9.34□□□□□ -0.91
PRKCB-208ENST00000487674 SLC5A9Q2M3M2 681 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
PRKCB-208ENST00000487674 RINT1Q6NUQ1 792 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 C1orf186Q6ZWK4 172 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ZNF461Q8TAF7 563 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 KCNG4Q8TDN1 519 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 SPIRE2Q8WWL2 714 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ING5Q8WYH8 240 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ZMAT2Q96NC0 199 aaKnown RBP9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ACAP3Q96P50 834 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 KIF2CQ99661 725 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 TCHPQ9BT92 498 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 TARS2Q9BW92 718 aaKnown RBP9.34□□□□□ -0.91
PRKCB-208ENST00000487674 BCO2Q9BYV7 579 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 OSBPL6Q9BZF3 934 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
PRKCB-208ENST00000487674 ANKFY1Q9P2R3 1169 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 KCNG1Q9UIX4 513 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 KIF3AQ9Y496 699 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 NUB1Q9Y5A7 615 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 R4GN57 208 aa9.34□□□□□ -0.91
PRKCB-208ENST00000487674 PRRG1O14668 218 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 SLC16A4O15374 487 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 MEFVO15553 781 aaPredicted RBP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 TBC1D4O60343 1298 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 TOM1L1O75674 476 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 HARSP12081 509 aaKnown RBP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 PLS3P13797 630 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 ATF2P15336 505 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 CEBPBP17676 345 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 ELF1P32519 619 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 MAGEA9P43362 315 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 ID4P47928 161 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 ATP2C1P98194 919 aaPredicted RBP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 STRN3Q13033 797 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 NOLC1Q14978 699 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 IL17AQ16552 155 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 ZNF528Q3MIS6 628 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 SLC44A4Q53GD3 710 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 HYIQ5T013 277 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 TPGS2Q68CL5 300 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 ZNF280DQ6N043 979 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 ZPBP2Q6X784 338 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 KCNK18Q7Z418 384 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 TCEAL8Q8IYN2 117 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 C18orf25Q96B23 403 aaPredicted RBP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 SUSD3Q96L08 255 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 NTPCRQ9BSD7 190 aaKnown RBP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 MMTAG2Q9BU76 263 aaKnown RBP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 CYP4F11Q9HBI6 524 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 KCND2Q9NZV8 630 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 INSL5Q9Y5Q6 135 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
PRKCB-208ENST00000487674 COL4A2P08572 1712 aa9.33□□□□□ -0.92
PRKCB-208ENST00000487674 LRRN2O75325 713 aa9.32□□□□□ -0.92
PRKCB-208ENST00000487674 MICAL2O94851 1124 aa9.32□□□□□ -0.92
PRKCB-208ENST00000487674 MAPTP10636 758 aaKnown RBP9.32□□□□□ -0.92
PRKCB-208ENST00000487674 PTPN2P17706 415 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms