RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 ALDH9A1P49189 494 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 RRADP55042 308 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 SUMO3P55854 103 aaPredicted RBP5.13□□□□□ -1.59
TTC3-213ENST00000469939 MAP3K12Q12852 859 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 ZNF568Q3ZCX4 644 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 KHDC1Q4VXA5 237 aaKnown RBP5.13□□□□□ -1.59
TTC3-213ENST00000469939 CCDC178Q5BJE1 867 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 ZMAT1Q5H9K5 638 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 INTS11Q5TA45 600 aaKnown RBP5.13□□□□□ -1.59
TTC3-213ENST00000469939 SLFN13Q68D06 897 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 GLB1LQ6UWU2 654 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 GGNQ86UU5 652 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 SUGP1Q8IWZ8 645 aaKnown RBP5.13□□□□□ -1.59
TTC3-213ENST00000469939 RHOT1Q8IXI2 618 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 SH2D3CQ8N5H7 860 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 MTFMTQ96DP5 389 aaKnown RBP5.13□□□□□ -1.59
TTC3-213ENST00000469939 CLPTM1LQ96KA5 538 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 RMDN3Q96TC7 470 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 NOL10Q9BSC4 688 aaKnown RBP5.13□□□□□ -1.59
TTC3-213ENST00000469939 MAGEH1Q9H213 219 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 GJB4Q9NTQ9 266 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 PNPOQ9NVS9 261 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.13□□□□□ -1.59
TTC3-213ENST00000469939 PPP4R1LQ9P1A2 415 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 CPA4Q9UI42 421 aa5.13□□□□□ -1.59
TTC3-213ENST00000469939 FBXO2Q9UK22 296 aaPredicted RBP5.13□□□□□ -1.59
TTC3-213ENST00000469939 A0A0A6YYK5 440 aaPredicted RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 NPEPPSL1A6NEC2 478 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 RRN3P2A6NIE6 340 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 SKAP2O75563 359 aaPredicted RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 SEC24DO94855 1032 aaPredicted RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 BRAFP15056 766 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 HTRA4P83105 476 aaPredicted RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 TARDBPQ13148 414 aaKnown RBP eCLIP5.12□□□□□ -1.59
TTC3-213ENST00000469939 G3BP1Q13283 466 aaKnown RBP eCLIP5.12□□□□□ -1.59
TTC3-213ENST00000469939 POSTNQ15063 836 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 ZNF827Q17R98 1081 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 ARL13BQ3SXY8 428 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 ZACNQ401N2 412 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 FKBP15Q5T1M5 1219 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 TRIM68Q6AZZ1 485 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 C1orf122Q6ZSJ8 110 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 RSRC2Q7L4I2 434 aaKnown RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 LIMS2Q7Z4I7 341 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 CELF5Q8N6W0 485 aaKnown RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 CCDC89Q8N998 374 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 GPR156Q8NFN8 814 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.12□□□□□ -1.59
TTC3-213ENST00000469939 HOXB13Q92826 284 aaPredicted RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 C18orf8Q96DM3 657 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 MSLNLQ96KJ4 702 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 FAM167AQ96KS9 214 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 MRGPRX4Q96LA9 322 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 VRK1Q99986 396 aaPredicted RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 SOX7Q9BT81 388 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 SSBP3Q9BWW4 388 aaPredicted RBP5.12□□□□□ -1.59
TTC3-213ENST00000469939 SEC61A2Q9H9S3 476 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 STK32BQ9NY57 414 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 ABCF2Q9UG63 623 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 CRYL1Q9Y2S2 319 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 CEP83Q9Y592 693 aa5.12□□□□□ -1.59
TTC3-213ENST00000469939 GOLGA6L3A6NEY3 463 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 EIF3FO00303 357 aaPredicted RBP5.11□□□□□ -1.59
TTC3-213ENST00000469939 NRP2O60462 931 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 ADRB1P08588 477 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 XPAP23025 273 aaPredicted RBP5.11□□□□□ -1.59
TTC3-213ENST00000469939 EEF1GP26641 437 aaKnown RBP5.11□□□□□ -1.59
TTC3-213ENST00000469939 SLC6A9P48067 706 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 RXRGP48443 463 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 MEOX1P50221 254 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 EIF5P55010 431 aaKnown RBP5.11□□□□□ -1.59
TTC3-213ENST00000469939 ARL4CP56559 192 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 CDC42EP1Q00587 391 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 MGAT5Q09328 741 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 SNAPC2Q13487 334 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 TAF5Q15542 800 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 PFKFB4Q16877 469 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 ZNF280DQ6N043 979 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 RETSATQ6NUM9 610 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 LARP4Q71RC2 724 aaKnown RBP eCLIP5.11□□□□□ -1.59
TTC3-213ENST00000469939 GLB1L2Q8IW92 636 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 RTKN2Q8IZC4 609 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 ATG16L2Q8NAA4 619 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 ATP11CQ8NB49 1132 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 ZNF566Q969W8 418 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 HIST1H2AHQ96KK5 128 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 MRGPRX1Q96LB2 322 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 HIST1H2AJQ99878 128 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
TTC3-213ENST00000469939 STK33Q9BYT3 514 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 KIAA1683Q9H0B3 1180 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 MEGF9Q9H1U4 602 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 OBP2BQ9NPH6 170 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 TDP1Q9NUW8 608 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.11□□□□□ -1.59
TTC3-213ENST00000469939 COL20A1Q9P218 1284 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 MYO1AQ9UBC5 1043 aa5.11□□□□□ -1.59
TTC3-213ENST00000469939 NPC1O15118 1278 aa5.1□□□□□ -1.59
TTC3-213ENST00000469939 AKR1B10O60218 316 aa5.1□□□□□ -1.59
TTC3-213ENST00000469939 TMEM127O75204 238 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms