RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 RAB20Q9NX57 234 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 LRRC42Q9Y546 428 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 GSTTP1A0A1W2PQM5 241 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 A6NHS1 94 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 DHX15O43143 795 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 P4HBP07237 508 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 SLC1A1P43005 524 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 SPP2Q13103 211 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 P3H1Q32P28 736 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 RGS9BPQ6ZS82 235 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 RIBC1Q8N443 379 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 ZCCHC9Q8N567 271 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 GLIS1Q8NBF1 620 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 BBOF1Q8ND07 529 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 FBXL13Q8NEE6 735 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-205ENST00000466780 SLX4Q8IY92 1834 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 EXOC1LA0A1B0GW35 172 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 EDF1O60869 148 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 ATP5HO75947 161 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 PROSCO94903 275 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 TPBGLP0DKB5 382 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 NCKAP1LP55160 1127 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 NLGN1Q8N2Q7 840 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 C10orf82Q8WW14 230 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 INPP5DQ92835 1189 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 TBC1D10AQ9BXI6 508 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 OSBPL8Q9BZF1 889 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 RANBP17Q9H2T7 1088 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 TRABDQ9H4I3 376 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 SAYSD1Q9NPB0 183 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 KCNH7Q9NS40 1196 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 CYP39A1Q9NYL5 469 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 ZBTB21Q9ULJ3 1066 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 ZNF536O15090 1300 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 MMP10P09238 476 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 LINGO3P0C6S8 592 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 FGFR1P11362 822 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 SNRPFP62306 86 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 FASTKD3Q14CZ7 662 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 KRT27Q7Z3Y8 459 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 STK32AQ8WU08 396 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 KIFC3Q9BVG8 833 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 EHMT1Q9H9B1 1298 aa13.78□□□□□ -0.2
PDZRN3-205ENST00000466780 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 CBX6O95503 412 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 RPA3P35244 121 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 IRX1P78414 480 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 SATB1Q01826 763 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 TRAF1Q13077 416 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 SPARCL1Q14515 664 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 SLC1A5Q15758 541 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 PDK4Q16654 411 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 HP1BP3Q5SSJ5 553 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 PCNX4Q63HM2 1172 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 ZNF449Q6P9G9 518 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 TRMT1LQ7Z2T5 733 aaKnown RBP13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 LONP2Q86WA8 852 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 C4orf33Q8N1A6 199 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 IL31RAQ8NI17 732 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 MRIQ9BWK5 157 aa13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 FHDC1Q9C0D6 1143 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-205ENST00000466780 POC1B-GALNT4F8VUJ3 575 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 UPP2O95045 317 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 LUC7L3O95232 432 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 EPHB2P29323 1055 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 RAD23BP54727 409 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 UGCGQ16739 394 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 TRIM68Q6AZZ1 485 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 PODNQ7Z5L7 613 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 ARMC2Q8NEN0 867 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 CFAP57Q96MR6 1250 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 ZSCAN5DPP0CG00 497 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 CD58P19256 250 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 CNGA1P29973 690 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 SLC18A1P54219 525 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 NR1H3Q13133 447 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 CCDC142Q17RM4 750 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 SLC39A4Q6P5W5 647 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 TDRPQ86YL5 185 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 ZNF483Q8TF39 744 aaPredicted RBP13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 MASTLQ96GX5 879 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 FAM81BQ96LP2 452 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 OSBPL1AQ9BXW6 950 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 TDRD3Q9H7E2 651 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 COL20A1Q9P218 1284 aa13.77□□□□□ -0.21
PDZRN3-205ENST00000466780 ZFATQ9P243 1243 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms