RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 LTBRP36941 435 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 PRCPP42785 496 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 BRCC3P46736 316 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
HSPG2-206ENST00000439717 NDUFV1P49821 464 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 GUCY2FP51841 1108 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 WNT7BP56706 349 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 TFAMQ00059 246 aaKnown RBP12.78□□□□□ -0.36
HSPG2-206ENST00000439717 CYP24A1Q07973 514 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 STIM1Q13586 685 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 PSMD6Q15008 389 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 EDRF1Q3B7T1 1238 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
HSPG2-206ENST00000439717 LEXMQ3ZCV2 418 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 ANKS3Q6ZW76 656 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 CEP57Q86XR8 500 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 WDR49Q8IV35 697 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 SMYD4Q8IYR2 804 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-206ENST00000439717 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 LNX1Q8TBB1 728 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-206ENST00000439717 SLC22A17Q8WUG5 538 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 CASP10Q92851 521 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 ERCC4Q92889 916 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-206ENST00000439717 ANKRD36BP1Q96IX9 119 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 B3GALT6Q96L58 329 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 ITGA11Q9UKX5 1188 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 BACE2Q9Y5Z0 518 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 HCFC2Q9Y5Z7 792 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 SPTBN5Q9NRC6 3674 aaKnown RBP12.78□□□□□ -0.36
HSPG2-206ENST00000439717 ANK1P16157 1881 aa12.78□□□□□ -0.36
HSPG2-206ENST00000439717 ARHGEF37A1IGU5 675 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 H7C4K7 107 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 I3L4J1 428 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 M0QZQ0 153 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-206ENST00000439717 MAPK13O15264 365 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 TBX10O75333 385 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 TNNC2P02585 160 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 TMEM191BP0C7N4 346 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 HOXB8P17481 243 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-206ENST00000439717 TKTP29401 623 aaKnown RBP12.77□□□□□ -0.37
HSPG2-206ENST00000439717 PNPLA4P41247 253 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 CLCN4P51793 760 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 LILRA4P59901 499 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 TFF2Q03403 129 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 MORC3Q14149 939 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 PSMD5Q16401 504 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 ZCWPW2Q504Y3 356 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 TRIML1Q8N9V2 468 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 VN1R2Q8NFZ6 395 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 MSLNLQ96KJ4 702 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 ZNF560Q96MR9 790 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 ASB2Q96Q27 587 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 CGRRF1Q99675 332 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 DZANK1Q9NVP4 752 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 CLEC1BQ9P126 229 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 MTRRQ9UBK8 725 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 DPP7Q9UHL4 492 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 FRMD4BQ9Y2L6 1034 aa12.77□□□□□ -0.37
HSPG2-206ENST00000439717 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 PSMA7O14818 248 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 PPEF2O14830 753 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 ITGB3P05106 788 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 NR2F2P24468 414 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 TAF6P49848 677 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 AP3M2P53677 418 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 RBP5P82980 135 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 ENPEPQ07075 957 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 CAMK4Q16566 473 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 SV2CQ496J9 727 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 CENPPQ6IPU0 288 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 ANKRD54Q6NXT1 300 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 ELMSAN1Q6PJG2 1045 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 PRSS55Q6UWB4 352 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 DSTYKQ6XUX3 929 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 ADSSL1Q8N142 457 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 C1orf127Q8N9H9 656 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 HDAC7Q8WUI4 952 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 CCDC127Q96BQ5 260 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 DHTKD1Q96HY7 919 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 TSG101Q99816 390 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 OXCT2Q9BYC2 517 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 CLSTN2Q9H4D0 955 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 CD207Q9UJ71 328 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 BARX2Q9UMQ3 279 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms