RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MIER2Q8N344 545 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-203ENST00000359759 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 CHI3L2Q15782 390 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 CENPPQ6IPU0 288 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 SHC4Q6S5L8 630 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 CHMP1BQ7LBR1 199 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 GID8Q9NWU2 228 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 NUP153P49790 1475 aaKnown RBP16.81■□□□□ 0.28
COL18A1-203ENST00000359759 RGS5O15539 181 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 HIST1H2AGP0C0S8 130 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-203ENST00000359759 RALAP11233 206 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 HIST1H2ADP20671 130 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 AVPR1AP37288 418 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 TRADDQ15628 312 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 HIST1H2AHQ96KK5 128 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 HIST1H2AJQ99878 128 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 H2AFJQ9BTM1 129 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 NSMCE4AQ9NXX6 385 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 SMG5Q9UPR3 1016 aaKnown RBP16.81■□□□□ 0.28
COL18A1-203ENST00000359759 DTNAQ9Y4J8 743 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 SNAP23O00161 211 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 SMNDC1O75940 238 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■■□□ 18.2
COL18A1-203ENST00000359759 P4HBP07237 508 aaKnown RBP16.81■□□□□ 0.28
COL18A1-203ENST00000359759 XPO6Q96QU8 1125 aaKnown RBP16.81■□□□□ 0.28
COL18A1-203ENST00000359759 SH3GL1Q99961 368 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 ATMINO43313 823 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-203ENST00000359759 CDK17Q00537 523 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 ZNF786Q8N393 782 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 SLC40A1Q9NP59 571 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 BLOC1S6Q9UL45 172 aa16.81■□□□□ 0.28
COL18A1-203ENST00000359759 CSE1LP55060 971 aaKnown RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 TRIM72Q6ZMU5 477 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 BNIPLQ7Z465 357 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 MICU2Q8IYU8 434 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 EFHBQ8N7U6 833 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 SHCBP1Q8NEM2 672 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 KCNF1Q9H3M0 494 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 NDUFS3O75489 264 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 WEE2P0C1S8 567 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 ALDH6A1Q02252 535 aaKnown RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 TAP1Q03518 808 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 GTF2H3Q13889 308 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 KCNK16Q96T55 309 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 TBC1D22BQ9NU19 505 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 C3orf70A6NLC5 250 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 CCND1P24385 295 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 BYSLQ13895 437 aaKnown RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 CELF4Q9BZC1 486 aaKnown RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 NDEL1Q9GZM8 345 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 PNMA8BQ9ULN7 279 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 FAM47DPA6NHR8 397 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 SEPT3Q9UH03 358 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 TTC39BQ5VTQ0 682 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 KHDRBS2Q5VWX1 349 aaKnown RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 TTC33Q6PID6 262 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 ATPAF2Q8N5M1 289 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 MDM1Q8TC05 714 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 C2orf40Q9H1Z8 148 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 STK36Q9NRP7 1315 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 AKR1B1P15121 316 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 HSD17B4P51659 736 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-203ENST00000359759 MMP19Q99542 508 aa16.8■□□□□ 0.28
COL18A1-203ENST00000359759 TMEM120BA0PK00 339 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 PRDX5P30044 214 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 SMTNL2Q2TAL5 461 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 C3orf62Q6ZUJ4 267 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 LATS2Q9NRM7 1088 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 ATP10AO60312 1499 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 UTYO14607 1347 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 KLK7P49862 253 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 SEC24CP53992 1094 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 GRAPQ13588 217 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-203ENST00000359759 CARD9Q9H257 536 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 RAD51CO43502 376 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 TPST1O60507 370 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 USP1O94782 785 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 ETFBP38117 255 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 RAB14P61106 215 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 CIAPIN1Q6FI81 312 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-203ENST00000359759 PFASO15067 1338 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 GCC2Q8IWJ2 1684 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 TRIM16LQ309B1 348 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 CMTM5Q96DZ9 223 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 RAD18Q9NS91 495 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 LSP1P33241 339 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 ACOT2P49753 483 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 LRIG3Q6UXM1 1119 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 P3H2Q8IVL5 708 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 HS6ST3Q8IZP7 471 aa16.79■□□□□ 0.28
COL18A1-203ENST00000359759 PCYOX1LQ8NBM8 494 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms