RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TPTE2Q6XPS3 522 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TAS2R42Q7RTR8 314 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 USP38Q8NB14 1042 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 U2AF1L4Q8WU68 220 aaKnown RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 PHF12Q96QT6 1004 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 FMO2Q99518 471 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 SENP6Q9GZR1 1112 aaPredicted RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 NT5C3AQ9H0P0 336 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 KIAA1586Q9HCI6 787 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 GPAMQ9HCL2 828 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 ABI2Q9NYB9 513 aaPredicted RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 EMC3Q9P0I2 261 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PCDHA13Q9Y5I0 950 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 DUSP10Q9Y6W6 482 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 INO80Q9ULG1 1556 aaPredicted RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TK2O00142 265 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 GSC2O15499 205 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 ITM2AO43736 263 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 DLG4P78352 724 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 MGAT5Q09328 741 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 C19orf57Q0VDD7 668 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 STRN3Q13033 797 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 TRMT5Q32P41 509 aaKnown RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 IGSF11Q5DX21 431 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 RFWD3Q6PCD5 774 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 UGT2A3Q6UWM9 527 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.07□□□□□ -0.96
TDP1-201ENST00000335725 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 CAPSLQ8WWF8 208 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 VTI1AQ96AJ9 217 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 MS4A14Q96JA4 679 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 CADM1Q9BY67 442 aaKnown RBP9.07□□□□□ -0.96
TDP1-201ENST00000335725 RIC8AQ9NPQ8 531 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 KCTD5Q9NXV2 234 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 ZFP69BQ9UJL9 534 aa9.07□□□□□ -0.96
TDP1-201ENST00000335725 PITPNM2Q9BZ72 1349 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 SALL1Q9NSC2 1324 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 RNF225M0QZC1 329 aaPredicted RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 TXNDC9O14530 226 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ZW10O43264 779 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 EXTL3O43909 919 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 BAG2O95816 211 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 STT3AP46977 705 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ZNF135P52742 658 aaPredicted RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 LRRC63Q05C16 580 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 UBE3CQ15386 1083 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 WDR59Q6PJI9 974 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 KLC2Q9H0B6 622 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 PCDHA12Q9UN75 941 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 TROQ12816 1431 aaPredicted RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 CLOCKO15516 846 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 GABBR2O75899 941 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 TFPTP0C1Z6 253 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 PKLRP30613 574 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 GNL1P36915 607 aaPredicted RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 RUNX1T1Q06455 604 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 LAPTM5Q13571 262 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 GRIK5Q16478 980 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 SLC45A4Q5BKX6 768 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 DCLRE1AQ6PJP8 1040 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 TICAM1Q8IUC6 712 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 AHI1Q8N157 1196 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ABTB2Q8N961 1025 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 RHPN1Q8TCX5 695 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 TAMM41Q96BW9 452 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 THAP11Q96EK4 314 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 CDH19Q9H159 772 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 SLITRK6Q9H5Y7 841 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 NKIRAS1Q9NYS0 192 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 CHKBQ9Y259 395 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 SLC12A7Q9Y666 1083 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ARAP3Q8WWN8 1544 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 WDR19Q8NEZ3 1342 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 DUOX2Q9NRD8 1548 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 H3BNX3 289 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 PLEKHA8P1O95397 391 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 FAM228BP0C875 321 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 T-ENOLP0DO92 83 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 RAP1GDS1P52306 607 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 STX17P56962 302 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 UBXN2AP68543 259 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 PTK2Q05397 1052 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 SQLEQ14534 574 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ZNF827Q17R98 1081 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 AAGABQ6PD74 315 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 LPCAT2Q7L5N7 544 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ANKLE1Q8NAG6 615 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ICA1LQ8NDH6 482 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 BCL7CQ8WUZ0 217 aaPredicted RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 AFG1LQ8WV93 481 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 MED15Q96RN5 788 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 WDR6Q9NNW5 1121 aaKnown RBP9.06□□□□□ -0.96
TDP1-201ENST00000335725 DIABLOQ9NR28 239 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 ATP6V1HQ9UI12 483 aa9.06□□□□□ -0.96
TDP1-201ENST00000335725 CEPT1Q9Y6K0 416 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms