RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 RGS2P41220 211 aa12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 BACE1P56817 501 aa12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 TGFB2P61812 414 aa12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 CAPRIN1Q14444 709 aaKnown RBP12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 ACER1Q8TDN7 264 aa12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 MCEEQ96PE7 176 aa12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 ADARB2Q9NS39 739 aaKnown RBP12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 SCOCQ9UIL1 159 aa12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 UBQLN1Q9UMX0 589 aaKnown RBP12.59□□□□□ -0.39
AMBRA1-201ENST00000314845 A0A1W2PQJ5 194 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 USP27XA6NNY8 438 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 E2F6O75461 281 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 UPP2O95045 317 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 DDX5P17844 614 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 ITIH2P19823 946 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 KLRK1P26718 216 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 HADHAP40939 763 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 MAPRE1Q15691 268 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 SCFD1Q8WVM8 642 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 ARHGEF26Q96DR7 871 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 TMEM117Q9H0C3 514 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 TRPC7Q9HCX4 862 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 SMAPO00193 183 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 PHF2O75151 1096 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 TADA3O75528 432 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 TAF6P49848 677 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 NFIAQ12857 509 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 TAF11Q15544 211 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 LCA5Q86VQ0 697 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 RNF135Q8IUD6 432 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 WDR24Q96S15 920 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 RAB6BQ9NRW1 208 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 SCAF8Q9UPN6 1271 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 GMCL1Q96IK5 515 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 MTFR1LQ9H019 292 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 FAM49BQ9NUQ9 324 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 DCTN4Q9UJW0 460 aa12.58□□□□□ -0.4
AMBRA1-201ENST00000314845 CYP2C8P10632 490 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 OR1G1P47890 313 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.43e-12■■■■■ 63.9
AMBRA1-201ENST00000314845 PDK1Q15118 436 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 ZKSCAN4Q969J2 545 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 OSBPL8Q9BZF1 889 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 TBX20Q9UMR3 447 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 OGTO15294 1046 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 MTSS1O43312 755 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 CCDC22O60826 627 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 SYN2Q92777 582 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 PPCSQ9HAB8 311 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 MLXIPLQ9NP71 852 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 AGPAT3Q9NRZ7 376 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 INTUQ9ULD6 942 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 UBE2Q2LH0YL09 131 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 CDH16O75309 829 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 RPLP2P05387 115 aaKnown RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 GNL1P36915 607 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 BYSLQ13895 437 aaKnown RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 MAPRE2Q15555 327 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 MGAT5BQ3V5L5 792 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 BEND6Q5SZJ8 279 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 GPAT2Q6NUI2 795 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 CD302Q8IX05 232 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 PABPC5Q96DU9 382 aaKnown RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 AGAP3Q96P47 875 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 SEPT5Q99719 369 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 CATSPERBQ9H7T0 1116 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 TAF6LQ9Y6J9 622 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 SLC30A1Q9Y6M5 507 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 PAK5Q9P286 719 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
AMBRA1-201ENST00000314845 RPSAP08865 295 aaKnown RBP12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 WEE2P0C1S8 567 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 KITP10721 976 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 GFAPP14136 432 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 TSPAN17Q96FV3 270 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 RBM15Q96T37 977 aaKnown RBP eCLIP12.56□□□□□ -0.46e-7■■■■■ 28.6
AMBRA1-201ENST00000314845 KLHL11Q9NVR0 708 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 AFF4Q9UHB7 1163 aaKnown RBP12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 USP32Q8NFA0 1604 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 C17orf102A2RUQ5 167 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 NPTXRO95502 500 aa12.56□□□□□ -0.4
AMBRA1-201ENST00000314845 FAM200BP0CF97 657 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms