RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ENPEPQ07075 957 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 DUOXA2Q1HG44 320 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 FAM133BQ5BKY9 247 aaKnown RBP10.66□□□□□ -0.7
HMGCR-201ENST00000287936 GADL1Q6ZQY3 521 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 RFX6Q8HWS3 928 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 GPATCH11Q8N954 259 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 EPS8L3Q8TE67 593 aaKnown RBP10.66□□□□□ -0.7
HMGCR-201ENST00000287936 MFSD14AQ96MC6 490 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 INO80BQ9C086 356 aaPredicted RBP10.66□□□□□ -0.7
HMGCR-201ENST00000287936 DEFB129Q9H1M3 183 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 CDC42EP4Q9H3Q1 356 aaKnown RBP10.66□□□□□ -0.7
HMGCR-201ENST00000287936 SENP1Q9P0U3 644 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 DDX20Q9UHI6 824 aaKnown RBP10.66□□□□□ -0.7
HMGCR-201ENST00000287936 COG5Q9UP83 839 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 CPP00450 1065 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 KRT7P08729 469 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 CLTAP09496 248 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 RALAP11233 206 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 MAP2K2P36507 400 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 SPARCL1Q14515 664 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 ZNF667Q5HYK9 610 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 VSIG10LQ86VR7 867 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 SRRM1Q8IYB3 904 aaKnown RBP10.66□□□□□ -0.7
HMGCR-201ENST00000287936 LRRC19Q9H756 370 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 MYH4Q9Y623 1939 aa10.66□□□□□ -0.7
HMGCR-201ENST00000287936 MCF2LO15068 1137 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 HNRNPH1P31943 449 aaKnown RBP10.65□□□□□ -0.7
HMGCR-201ENST00000287936 PIGHQ14442 188 aaPredicted RBP10.65□□□□□ -0.7
HMGCR-201ENST00000287936 CCNG2Q16589 344 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 CAPN12Q6ZSI9 719 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 SLC16A10Q8TF71 515 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 KLHL29Q96CT2 875 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 KREMEN1Q96MU8 473 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 PCDHB18PQ96TA0 734 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 RPF1Q9H9Y2 349 aaKnown RBP10.65□□□□□ -0.7
HMGCR-201ENST00000287936 NXF1Q9UBU9 619 aaKnown RBP10.65□□□□□ -0.7
HMGCR-201ENST00000287936 SRGAP2CP0DJJ0 459 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 MARCKSL1P49006 195 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 STAT5BP51692 787 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 ARL4CP56559 192 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 PALB2Q86YC2 1186 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 MAP7D3Q8IWC1 876 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 EXD1Q8NHP7 514 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 CLEC4DQ8WXI8 215 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 DCLK3Q9C098 648 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 TXLNGQ9NUQ3 528 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 NFASCO94856 1347 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 ASAP2O43150 1006 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 GHRP10912 638 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 FLT3P36888 993 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 MRPS9P82933 396 aaKnown RBP10.65□□□□□ -0.7
HMGCR-201ENST00000287936 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
HMGCR-201ENST00000287936 PTK6Q13882 451 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 KYNUQ16719 465 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 UGCGQ16739 394 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 SGSM1Q2NKQ1 1148 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 PACS2Q86VP3 889 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 PARP9Q8IXQ6 854 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 PIK3R5Q8WYR1 880 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 SGSM3Q96HU1 749 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 TARS2Q9BW92 718 aaKnown RBP10.65□□□□□ -0.7
HMGCR-201ENST00000287936 KDM4CQ9H3R0 1056 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 ERVK-5Q9HDB9 667 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 COL20A1Q9P218 1284 aa10.65□□□□□ -0.7
HMGCR-201ENST00000287936 TMEM120BA0PK00 339 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 DSG3P32926 999 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 GPS1Q13098 491 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 KRT81Q14533 505 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 KCTD2Q14681 263 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 TCEAL1Q15170 157 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 AADACL2Q6P093 401 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 SCARA5Q6ZMJ2 495 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 ABRAQ8N0Z2 381 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 ART4Q93070 314 aa10.65□□□□□ -0.71
HMGCR-201ENST00000287936 TGS1Q96RS0 853 aaKnown RBP10.65□□□□□ -0.71
HMGCR-201ENST00000287936 RBM15Q96T37 977 aaKnown RBP eCLIP10.65□□□□□ -0.711e-10■■■■□ 26.6
HMGCR-201ENST00000287936 USP15Q9Y4E8 981 aaPredicted RBP10.65□□□□□ -0.71
HMGCR-201ENST00000287936 FSCN2O14926 492 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 P3H1Q32P28 736 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 LRRC34Q8IZ02 419 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 PITPNM3Q9BZ71 974 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 HACL1Q9UJ83 578 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ARL2BPQ9Y2Y0 163 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 TCP11X1B4DZS4 312 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ARSEP51690 589 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 MCL1Q07820 350 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 LRRC14Q15048 493 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 C6orf163Q5TEZ5 329 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 PDIK1LQ8N165 341 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 KCTD6Q8NC69 237 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 PPP1R14CQ8TAE6 165 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 PYROXD1Q8WU10 500 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 HAUS1Q96CS2 278 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ADPGKQ9BRR6 497 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 NIF3L1Q9GZT8 377 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 NOCTQ9UK39 431 aaKnown RBP10.64□□□□□ -0.71
HMGCR-201ENST00000287936 MYH7BA7E2Y1 1941 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 THSD7AQ9UPZ6 1657 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ATP9AO75110 1047 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms