RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 PYROXD1Q8WU10 500 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 PPWD1Q96BP3 646 aaKnown RBP14.05□□□□□ -0.16
CCDC117-201ENST00000249064 ERVK-5Q9HDB9 667 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 DNAAF2Q9NVR5 837 aaKnown RBP14.05□□□□□ -0.16
CCDC117-201ENST00000249064 TISP43B9A030 160 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 RARGP13631 454 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 KRT4P19013 534 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 ADARP55265 1226 aaKnown RBP14.05□□□□□ -0.16
CCDC117-201ENST00000249064 MRPS9P82933 396 aaKnown RBP14.05□□□□□ -0.16
CCDC117-201ENST00000249064 TSPY1Q01534 308 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 LMBRD2Q68DH5 695 aaPredicted RBP14.05□□□□□ -0.16
CCDC117-201ENST00000249064 DCUN1D2Q6PH85 259 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 KRT35Q92764 455 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 NSL1Q96IY1 281 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 Q9H521 79 aa14.05□□□□□ -0.16
CCDC117-201ENST00000249064 TDRKHQ9Y2W6 561 aaKnown RBP14.05□□□□□ -0.16
CCDC117-201ENST00000249064 A6NJR5 290 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 PTPN4P29074 926 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 NOP14P78316 857 aaKnown RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 PDIA2Q13087 525 aaKnown RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 CDCA2Q69YH5 1023 aaPredicted RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 RFWD3Q6PCD5 774 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 C16orf87Q6PH81 154 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 CNBD2Q96M20 576 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 ZNF184Q99676 751 aaPredicted RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 ACP6Q9NPH0 428 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 DOLKQ9UPQ8 538 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 MYH7P12883 1935 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 O00370 1275 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 PJA2O43164 708 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 TPBGLP0DKB5 382 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 HSPA6P17066 643 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 MARCKSL1P49006 195 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 BASP1P80723 227 aaKnown RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 WDR78Q5VTH9 848 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 NXNQ6DKJ4 435 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 WDR60Q8WVS4 1066 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 PPP1R36Q96LQ0 422 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 TRAIPQ9BWF2 469 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 TEKT3Q9BXF9 490 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 NUF2Q9BZD4 464 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 ETNK2Q9NVF9 386 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 WDR35Q9P2L0 1181 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 PARP4Q9UKK3 1724 aaKnown RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 EMSYQ7Z589 1322 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 TMEM150BA6NC51 233 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 TMEM179Q6ZVK1 233 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 PURBQ96QR8 312 aaKnown RBP14.04□□□□□ -0.16
CCDC117-201ENST00000249064 TSSK1BQ9BXA7 367 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 LMCD1Q9NZU5 365 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 ANKFY1Q9P2R3 1169 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 PKD1L3Q7Z443 1732 aa14.04□□□□□ -0.16
CCDC117-201ENST00000249064 SLC16A4O15374 487 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 GPS1Q13098 491 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 TMEM119Q4V9L6 283 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 DSTYKQ6XUX3 929 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 PYDC1Q8WXC3 89 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 MAGEB18Q96M61 343 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 LRGUKQ96M69 825 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 ZMAT2Q96NC0 199 aaKnown RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 EDEM3Q9BZQ6 932 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 QTRT2Q9H974 415 aaKnown RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 PACSIN3Q9UKS6 424 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 PRR12Q9ULL5 1215 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 TMA7Q9Y2S6 64 aaKnown RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 MAD1L1Q9Y6D9 718 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 C2orf71A6NGG8 1288 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 ECE2O60344 883 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 PTENP60484 403 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 HGSNATQ68CP4 663 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 SCFD2Q8WU76 684 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 CNKSR1Q969H4 720 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 SNF8Q96H20 258 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 ZNF317Q96PQ6 595 aaPredicted RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 LXNQ9BS40 222 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 INTS2Q9H0H0 1204 aaKnown RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 C12orf65Q9H3J6 166 aaKnown RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 DMAP1Q9NPF5 467 aaPredicted RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 NOL4O94818 638 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 SEC24DO94855 1032 aaPredicted RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 FECHP22830 423 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 COILP38432 576 aaPredicted RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 GPC5P78333 572 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 CNGA3Q16281 694 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 MTHFD1LQ6UB35 978 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 PIGWQ7Z7B1 504 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 ZNF564Q8TBZ8 553 aaPredicted RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 FAM84AQ96KN4 292 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 FBXO6Q9NRD1 293 aaPredicted RBP14.03□□□□□ -0.16
CCDC117-201ENST00000249064 WASF2Q9Y6W5 498 aa14.03□□□□□ -0.16
CCDC117-201ENST00000249064 NUP98P52948 1817 aa14.02□□□□□ -0.16
CCDC117-201ENST00000249064 TJP3O95049 919 aa14.02□□□□□ -0.16
CCDC117-201ENST00000249064 TNNI1P19237 187 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms