RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CYB5R4Q7L1T6 521 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 SAR1AQ9NR31 198 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 TRIM49P0CI25 452 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 TRIM49CP0CI26 452 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 BNC2Q6ZN30 1099 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 ASNA1O43681 348 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 FMO5P49326 533 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 ARMCX4Q5H9R4 360 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 ZNF786Q8N393 782 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CD209Q9NNX6 404 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 AKT3Q9Y243 479 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 SLC34A1Q06495 639 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CENPPQ6IPU0 288 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 IZUMO2Q6UXV1 221 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 OR2W6PQ8NHA6 318 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CAAP1Q9H8G2 361 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 MARCOQ9UEW3 520 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 MAP3K13O43283 966 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 TP53BP2Q13625 1128 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 STILQ15468 1287 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 C7orf31Q8N865 590 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 INPP5DQ92835 1189 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 RAD21L1Q9H4I0 556 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PIH1D3Q9NQM4 214 aaKnown RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 A2ML1A8K2U0 1454 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PNPLA7Q6ZV29 1317 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CCNJLQ8IV13 435 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 SLC24A2Q9UI40 661 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PEX5P50542 639 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 SCARA5Q6ZMJ2 495 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 SHROOM2Q13796 1616 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 DYTNA2CJ06 578 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 SLCO1B7G3V0H7 640 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PDHBP11177 359 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PPIDQ08752 370 aaKnown RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 MDM1Q8TC05 714 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 C9orf72Q96LT7 481 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 BSDC1Q9NW68 430 aaPredicted RBP8.61□□□□□ -1.03
APOB-201ENST00000233242 EMSYQ7Z589 1322 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 MAP2K7O14733 419 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 HDDC2Q7Z4H3 204 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 PHF21AQ96BD5 680 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 RSAD1Q9HA92 442 aa8.61□□□□□ -1.03
APOB-201ENST00000233242 CAND2O75155 1236 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 PEX3P56589 373 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 EFHC1Q5JVL4 640 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 ZNF746Q6NUN9 644 aaPredicted RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 LRRC6Q86X45 466 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 TOPORSQ9NS56 1045 aaPredicted RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 OLA1Q9NTK5 396 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 RIC8BQ9NVN3 520 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 DCDC2Q9UHG0 476 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 SETD1BQ9UPS6 1966 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 A0A0A6YYK5 440 aaPredicted RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 TRIM24O15164 1050 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 MTSS1O43312 755 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 UBOX5O94941 541 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 ILF2Q12905 390 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 BBS7Q8IWZ6 715 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 CDC26Q8NHZ8 85 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 GOLGA8RI6L899 631 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 TPP2P29144 1249 aaPredicted RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 BLVRAP53004 296 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 PURAQ00577 322 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 KCTD2Q14681 263 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 PI16Q6UXB8 463 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 TMEM179Q6ZVK1 233 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 FOXP4Q8IVH2 680 aaPredicted RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.6□□□□□ -1.03
APOB-201ENST00000233242 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 ZSWIM1Q9BR11 485 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 PCMTD2Q9NV79 361 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 CSADQ9Y600 493 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 MROH7-TTC4A0A0A0MT08 1334 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 WBP4O75554 376 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 ABL1P00519 1130 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 FCER1AP12319 257 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 ST13P50502 369 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 PPHLN1Q8NEY8 458 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 ASAP3Q8TDY4 903 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 TNPO2O14787 897 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 ATP9AO75110 1047 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 C2orf40Q9H1Z8 148 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 GJB4Q9NTQ9 266 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 EYA4O95677 639 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 NSUN2Q08J23 767 aaKnown RBP eCLIP8.6□□□□□ -1.03
APOB-201ENST00000233242 CENPTQ96BT3 561 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 UBAP1Q9NZ09 502 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 GTF3C4Q9UKN8 822 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 ZNF608Q9ULD9 1512 aaPredicted RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 APRTP07741 180 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 USP17L8P0C7I0 530 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 ZCCHC18P0CG32 403 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 TMPRSS6Q8IU80 811 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 P3H2Q8IVL5 708 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms