RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 PSF1Q12488 208 aa-1.94□□□□□ -2.72
snR47snR47 MRPS28P21771 286 aa-1.95□□□□□ -2.72
snR47snR47 RPF1P38805 295 aaKnown RBP-1.95□□□□□ -2.72
snR47snR47 ERG28P40030 148 aa-1.95□□□□□ -2.72
snR47snR47 MET31Q03081 177 aa-1.95□□□□□ -2.72
snR47snR47 ASR1Q06834 288 aa-1.95□□□□□ -2.72
snR47snR47 CDC31P06704 161 aaKnown RBP-1.96□□□□□ -2.72
snR47snR47 CLG1P35190 452 aa-1.96□□□□□ -2.72
snR47snR47 YDC1Q02896 317 aa-1.96□□□□□ -2.72
snR47snR47 UPS3Q04006 179 aa-1.96□□□□□ -2.72
snR47snR47 KEI1Q06346 221 aa-1.96□□□□□ -2.72
snR47snR47 TAR1Q8TGM6 124 aa-1.96□□□□□ -2.72
snR47snR47 TUS1Q06412 1307 aa-1.96□□□□□ -2.72
snR47snR47 RPP0P05317 312 aaKnown RBP-1.97□□□□□ -2.72
snR47snR47 POF1P25576 258 aa-1.97□□□□□ -2.72
snR47snR47 SNC2P33328 115 aa-1.97□□□□□ -2.72
snR47snR47 COX16P47081 118 aa-1.97□□□□□ -2.72
snR47snR47 MRH4P53166 561 aa-1.97□□□□□ -2.72
snR47snR47 NIP7Q08962 181 aaKnown RBP-1.97□□□□□ -2.72
snR47snR47 IPP1P00817 287 aaKnown RBP-1.98□□□□□ -2.73
snR47snR47 VPS71Q03433 280 aa-1.98□□□□□ -2.73
snR47snR47 SFH1Q06168 426 aa-1.98□□□□□ -2.73
snR47snR47 SYC1Q08553 188 aaPredicted RBP-1.98□□□□□ -2.73
snR47snR47 ICL1P28240 557 aaPredicted RBP-1.99□□□□□ -2.73
snR47snR47 MAK5P38112 773 aaPredicted RBP-1.99□□□□□ -2.73
snR47snR47 PRE6P40303 254 aaKnown RBP-1.99□□□□□ -2.73
snR47snR47 YPL073CP40323 161 aa-1.99□□□□□ -2.73
snR47snR47 SER2P42941 309 aa-1.99□□□□□ -2.73
snR47snR47 LOH1P47055 219 aa-1.99□□□□□ -2.73
snR47snR47 GRE1Q08969 168 aa-1.99□□□□□ -2.73
snR47snR47 GPM2Q12008 311 aa-1.99□□□□□ -2.73
snR47snR47 POM33Q12164 279 aa-1.99□□□□□ -2.73
snR47snR47 REP2P03872 296 aa-2□□□□□ -2.73
snR47snR47 ADE1P27616 306 aa-2□□□□□ -2.73
snR47snR47 PET191Q02772 108 aa-2□□□□□ -2.73
snR47snR47 GOT1Q03554 138 aa-2□□□□□ -2.73
snR47snR47 YPR174CQ06616 221 aaPredicted RBP-2□□□□□ -2.73
snR47snR47 YOR034C-AQ3E735 80 aa-2□□□□□ -2.73
snR47snR47 YOR020W-AQ3E824 90 aa-2□□□□□ -2.73
snR47snR47 HTL1Q9URQ5 78 aa-2□□□□□ -2.73
snR47snR47 ROM2P51862 1356 aaKnown RBP-2□□□□□ -2.73
snR47snR47 FCY2P17064 533 aa-2.01□□□□□ -2.73
snR47snR47 TVP23P38962 199 aa-2.01□□□□□ -2.73
snR47snR47 DAD4P69851 72 aa-2.01□□□□□ -2.73
snR47snR47 LAA1P39526 2014 aa-2.01□□□□□ -2.73
snR47snR47 BLI1P35727 113 aa-2.02□□□□□ -2.73
snR47snR47 YKR070WP36151 352 aaKnown RBP-2.02□□□□□ -2.73
snR47snR47 YBR063CP38083 404 aa-2.02□□□□□ -2.73
snR47snR47 THO1P40040 218 aaKnown RBP-2.02□□□□□ -2.73
snR47snR47 SIA1Q12212 622 aa-2.02□□□□□ -2.73
snR47snR47 JLP1Q12358 412 aa-2.02□□□□□ -2.73
snR47snR47 NBL1Q3E7Y6 73 aa-2.02□□□□□ -2.73
snR47snR47 STH1P32597 1359 aa-2.02□□□□□ -2.73
snR47snR47 RNR2P09938 399 aaKnown RBP-2.03□□□□□ -2.73
snR47snR47 RPL5P26321 297 aaKnown RBP-2.03□□□□□ -2.73
snR47snR47 UBC6P33296 250 aaPredicted RBP-2.03□□□□□ -2.73
snR47snR47 MRPL17P36528 281 aa-2.03□□□□□ -2.73
snR47snR47 MRPL40P36534 297 aa-2.03□□□□□ -2.73
snR47snR47 YHL018WP38744 120 aaPredicted RBP-2.03□□□□□ -2.73
snR47snR47 HTD2P38790 280 aaKnown RBP-2.03□□□□□ -2.73
snR47snR47 YJL055WP47044 245 aa-2.03□□□□□ -2.73
snR47snR47 EAF6P47128 113 aa-2.03□□□□□ -2.73
snR47snR47 MSF1P08425 469 aa-2.04□□□□□ -2.74
snR47snR47 MSN4P33749 630 aa-2.04□□□□□ -2.74
snR47snR47 SWC5P38326 303 aa-2.04□□□□□ -2.74
snR47snR47 AGP3P43548 558 aa-2.04□□□□□ -2.74
snR47snR47 HAM1P47119 197 aaKnown RBP-2.04□□□□□ -2.74
snR47snR47 UBC12P52491 188 aa-2.04□□□□□ -2.74
snR47snR47 LSB1P53281 241 aa-2.04□□□□□ -2.74
snR47snR47 YNL010WP53981 241 aaKnown RBP-2.04□□□□□ -2.74
snR47snR47 CDC14Q00684 551 aa-2.04□□□□□ -2.74
snR47snR47 YMR111CQ04461 462 aaPredicted RBP-2.04□□□□□ -2.74
snR47snR47 NAT3Q06504 195 aa-2.04□□□□□ -2.74
snR47snR47 ARV1Q06541 321 aa-2.04□□□□□ -2.74
snR47snR47 GPN3Q06543 272 aa-2.04□□□□□ -2.74
snR47snR47 YOR186WQ08560 144 aa-2.04□□□□□ -2.74
snR47snR47 PAA1Q12447 191 aaKnown RBP-2.04□□□□□ -2.74
snR47snR47 PET18P25362 215 aa-2.05□□□□□ -2.74
snR47snR47 YHR140WP38842 239 aa-2.05□□□□□ -2.74
snR47snR47 LIN1P38852 340 aaPredicted RBP-2.05□□□□□ -2.74
snR47snR47 CPD1P53314 239 aa-2.05□□□□□ -2.74
snR47snR47 YDR248CQ03786 193 aa-2.05□□□□□ -2.74
snR47snR47 YBR285WP38354 144 aa-2.06□□□□□ -2.74
snR47snR47 TDA11P38854 504 aa-2.06□□□□□ -2.74
snR47snR47 CDC40P40968 455 aaPredicted RBP-2.06□□□□□ -2.74
snR47snR47 GCD14P46959 383 aaPredicted RBP-2.06□□□□□ -2.74
snR47snR47 SWP1Q02795 286 aa-2.06□□□□□ -2.74
snR47snR47 MGR2Q02889 113 aa-2.06□□□□□ -2.74
snR47snR47 SME1Q12330 94 aaPredicted RBP-2.06□□□□□ -2.74
snR47snR47 SNF8Q12483 233 aa-2.06□□□□□ -2.74
snR47snR47 URA2P07259 2214 aaKnown RBP-2.07□□□□□ -2.74
snR47snR47 COX8P04039 78 aa-2.07□□□□□ -2.74
snR47snR47 RPS22AP0C0W1 130 aaKnown RBP-2.07□□□□□ -2.74
snR47snR47 YKL070WP36087 169 aa-2.07□□□□□ -2.74
snR47snR47 ADH5P38113 351 aaKnown RBP-2.07□□□□□ -2.74
snR47snR47 GVP36P40531 326 aaKnown RBP-2.07□□□□□ -2.74
snR47snR47 SRB7P47822 140 aa-2.07□□□□□ -2.74
snR47snR47 VPS9P54787 451 aa-2.07□□□□□ -2.74
snR47snR47 TSC3Q3E790 80 aa-2.07□□□□□ -2.74
snR47snR47 RPS22BQ3E7Y3 130 aaKnown RBP-2.07□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 80.3 ms