RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W GOR1P53839 350 aa1.35□□□□□ -2.19
CTF4YPR135W OSH6Q02201 448 aa1.35□□□□□ -2.19
CTF4YPR135W YMR027WQ04371 470 aa1.35□□□□□ -2.19
CTF4YPR135W YHC1Q05900 231 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W ARC18Q05933 178 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W CTR3Q06686 241 aa1.35□□□□□ -2.19
CTF4YPR135W MIM1Q08176 113 aa1.35□□□□□ -2.19
CTF4YPR135W BRX1Q08235 291 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W SNX3Q08826 162 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W YPL199CQ08954 240 aa1.35□□□□□ -2.19
CTF4YPR135W SME1Q12330 94 aaPredicted RBP1.35□□□□□ -2.19
CTF4YPR135W YGR035W-AQ45U48 73 aa1.35□□□□□ -2.19
CTF4YPR135W FBA1P14540 359 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W URA6P15700 204 aa1.35□□□□□ -2.19
CTF4YPR135W CDC10P25342 322 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W IDH1P28834 360 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
CTF4YPR135W GPX1P36014 167 aa1.35□□□□□ -2.19
CTF4YPR135W MIX23P38162 196 aa1.35□□□□□ -2.19
CTF4YPR135W GOS1P38736 223 aa1.35□□□□□ -2.19
CTF4YPR135W SEO1P39709 593 aa1.35□□□□□ -2.19
CTF4YPR135W YFL064CP43540 174 aa1.35□□□□□ -2.19
CTF4YPR135W LCB3P47013 409 aa1.35□□□□□ -2.19
CTF4YPR135W YPS5P53057 165 aa1.35□□□□□ -2.19
CTF4YPR135W MRM2P53123 320 aa1.35□□□□□ -2.19
CTF4YPR135W USE1P53146 245 aa1.35□□□□□ -2.19
CTF4YPR135W YNL140CP53910 189 aa1.35□□□□□ -2.19
CTF4YPR135W YDC1Q02896 317 aa1.35□□□□□ -2.19
CTF4YPR135W YMR181CQ03231 154 aa1.35□□□□□ -2.19
CTF4YPR135W YMR010WQ03687 405 aa1.35□□□□□ -2.19
CTF4YPR135W UTP15Q04305 513 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W PEX30Q06169 523 aa1.35□□□□□ -2.19
CTF4YPR135W COQ10Q08058 207 aa1.35□□□□□ -2.19
CTF4YPR135W YPR202WQ08993 238 aa1.35□□□□□ -2.19
CTF4YPR135W YCT1Q12235 531 aa1.35□□□□□ -2.19
CTF4YPR135W UTP23Q12339 254 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W DCN1Q12395 269 aa1.35□□□□□ -2.19
CTF4YPR135W RPL23AP0CX41 137 aaKnown RBP1.34□□□□□ -2.19
CTF4YPR135W RPL23BP0CX42 137 aaKnown RBP1.34□□□□□ -2.19
CTF4YPR135W CTA1P15202 515 aa1.34□□□□□ -2.19
CTF4YPR135W YCR025CP25352 136 aa1.34□□□□□ -2.19
CTF4YPR135W SUI1P32911 108 aaKnown RBP1.34□□□□□ -2.19
CTF4YPR135W PMU1P36069 295 aa1.34□□□□□ -2.19
CTF4YPR135W FIG1P38224 298 aa1.34□□□□□ -2.19
CTF4YPR135W MTC6P38849 526 aa1.34□□□□□ -2.19
CTF4YPR135W CHL4P38907 458 aa1.34□□□□□ -2.19
CTF4YPR135W COG3P40094 801 aa1.34□□□□□ -2.19
CTF4YPR135W AYR1P40471 297 aa1.34□□□□□ -2.19
CTF4YPR135W DFG10P40526 253 aa1.34□□□□□ -2.19
CTF4YPR135W AGE2P40529 298 aa1.34□□□□□ -2.19
CTF4YPR135W GAB1P41733 394 aa1.34□□□□□ -2.19
CTF4YPR135W YJR012CP47087 207 aa1.34□□□□□ -2.19
CTF4YPR135W MIC26P50087 233 aa1.34□□□□□ -2.19
CTF4YPR135W SNO1Q03144 224 aa1.34□□□□□ -2.19
CTF4YPR135W MIX14Q04341 121 aa1.34□□□□□ -2.19
CTF4YPR135W PEX10Q05568 337 aa1.34□□□□□ -2.19
CTF4YPR135W ATG17Q06410 417 aa1.34□□□□□ -2.19
CTF4YPR135W USB1Q12208 290 aaKnown RBP1.34□□□□□ -2.19
CTF4YPR135W YPR064WQ12492 139 aa1.34□□□□□ -2.19
CTF4YPR135W ATR1P13090 542 aa1.34□□□□□ -2.2
CTF4YPR135W ERD1P16151 362 aa1.34□□□□□ -2.2
CTF4YPR135W FUN26P31381 517 aa1.34□□□□□ -2.2
CTF4YPR135W SPS18P32572 300 aa1.34□□□□□ -2.2
CTF4YPR135W YKR041WP36134 250 aa1.34□□□□□ -2.2
CTF4YPR135W FES1P38260 290 aa1.34□□□□□ -2.2
CTF4YPR135W PEX22P39718 180 aa1.34□□□□□ -2.2
CTF4YPR135W RPR2P40571 144 aa1.34□□□□□ -2.2
CTF4YPR135W TMA22P47089 198 aaPredicted RBP1.34□□□□□ -2.2
CTF4YPR135W MIG2P53035 382 aa1.34□□□□□ -2.2
CTF4YPR135W ASI3P53983 676 aa1.34□□□□□ -2.2
CTF4YPR135W VPS60Q03390 229 aa1.34□□□□□ -2.2
CTF4YPR135W YLR446WQ06204 433 aa1.34□□□□□ -2.2
CTF4YPR135W MHR1Q06630 226 aa1.34□□□□□ -2.2
CTF4YPR135W YDL109CQ12103 647 aa1.34□□□□□ -2.2
CTF4YPR135W JLP1Q12358 412 aa1.34□□□□□ -2.2
CTF4YPR135W PRM4Q12498 284 aa1.34□□□□□ -2.2
CTF4YPR135W YHR139C-AO13536 103 aa1.33□□□□□ -2.2
CTF4YPR135W YSF3P0C074 85 aaPredicted RBP1.33□□□□□ -2.2
CTF4YPR135W YOL163WP0CF20 169 aa1.33□□□□□ -2.2
CTF4YPR135W CPT1P17898 393 aa1.33□□□□□ -2.2
CTF4YPR135W GIT1P25346 518 aa1.33□□□□□ -2.2
CTF4YPR135W RPL16AP26784 199 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W SUR2P38992 349 aa1.33□□□□□ -2.2
CTF4YPR135W SPO73P40031 143 aa1.33□□□□□ -2.2
CTF4YPR135W YJL213WP40896 331 aa1.33□□□□□ -2.2
CTF4YPR135W OST3P48439 350 aa1.33□□□□□ -2.2
CTF4YPR135W YLR460CP54007 376 aa1.33□□□□□ -2.2
CTF4YPR135W YLR152CP54072 576 aa1.33□□□□□ -2.2
CTF4YPR135W SDC1Q03323 175 aa1.33□□□□□ -2.2
CTF4YPR135W DPP1Q05521 289 aa1.33□□□□□ -2.2
CTF4YPR135W MRX9Q07349 420 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W THP3Q12049 470 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W FCY22Q12119 530 aa1.33□□□□□ -2.2
CTF4YPR135W AYT1Q12226 474 aa1.33□□□□□ -2.2
CTF4YPR135W YLR126CQ12288 251 aa1.33□□□□□ -2.2
CTF4YPR135W PST1Q12355 444 aa1.33□□□□□ -2.2
CTF4YPR135W RTR2Q12378 196 aa1.33□□□□□ -2.2
CTF4YPR135W HTZ1Q12692 134 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W YPL119C-AQ3E751 87 aa1.33□□□□□ -2.2
CTF4YPR135W HHF1P02309 103 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W PUT1P09368 476 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms