RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeastyeast

Gene CSM4, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM4YPL200W RPL33BP41056 107 aaKnown RBP1.22□□□□□ -2.21
CSM4YPL200W CDC8P00572 216 aa1.21□□□□□ -2.22
CSM4YPL200W MEI4P29467 408 aa1.21□□□□□ -2.22
CSM4YPL200W UPS2P35200 230 aa1.21□□□□□ -2.22
CSM4YPL200W TIR3P40552 269 aa1.21□□□□□ -2.22
CSM4YPL200W ILM1P47155 203 aa1.21□□□□□ -2.22
CSM4YPL200W YML096WQ04489 525 aa1.21□□□□□ -2.22
CSM4YPL200W RRT8Q08219 342 aa1.21□□□□□ -2.22
CSM4YPL200W ATG31Q12421 196 aa1.21□□□□□ -2.22
CSM4YPL200W RIB1P38066 345 aa1.2□□□□□ -2.22
CSM4YPL200W RPL13BP40212 199 aaKnown RBP1.2□□□□□ -2.22
CSM4YPL200W RSM25P40496 264 aa1.2□□□□□ -2.22
CSM4YPL200W BNA6P43619 295 aa1.2□□□□□ -2.22
CSM4YPL200W TRM12Q04235 462 aa1.2□□□□□ -2.22
CSM4YPL200W SPG3Q04398 127 aaPredicted RBP1.2□□□□□ -2.22
CSM4YPL200W SSQ1Q05931 657 aaPredicted RBP1.2□□□□□ -2.22
CSM4YPL200W PSF1Q12488 208 aa1.2□□□□□ -2.22
CSM4YPL200W RPL13AQ12690 199 aaPredicted RBP1.2□□□□□ -2.22
CSM4YPL200W VPS21P36017 210 aaKnown RBP1.19□□□□□ -2.22
CSM4YPL200W ICE2P40499 491 aa1.19□□□□□ -2.22
CSM4YPL200W YJR149WP47177 404 aa1.19□□□□□ -2.22
CSM4YPL200W BOL2P53082 120 aa1.19□□□□□ -2.22
CSM4YPL200W ERV29P53337 310 aa1.19□□□□□ -2.22
CSM4YPL200W MRPL50P53724 139 aa1.19□□□□□ -2.22
CSM4YPL200W YNL134CP53912 376 aaKnown RBP1.19□□□□□ -2.22
CSM4YPL200W ABF2Q02486 183 aa1.19□□□□□ -2.22
CSM4YPL200W PAM18Q07914 168 aa1.19□□□□□ -2.22
CSM4YPL200W RPL27BP0C2H7 136 aaKnown RBP1.18□□□□□ -2.22
CSM4YPL200W YUH1P35127 236 aa1.18□□□□□ -2.22
CSM4YPL200W PEX17P40155 199 aa1.18□□□□□ -2.22
CSM4YPL200W PGD1P40356 397 aa1.18□□□□□ -2.22
CSM4YPL200W KRE28Q04431 385 aa1.18□□□□□ -2.22
CSM4YPL200W YRB2P40517 327 aa1.17□□□□□ -2.22
CSM4YPL200W YLR173WQ06247 608 aa1.17□□□□□ -2.22
CSM4YPL200W SRB4P32569 687 aa1.16□□□□□ -2.22
CSM4YPL200W FZF1P32805 299 aa1.16□□□□□ -2.22
CSM4YPL200W IRC22P40006 225 aa1.16□□□□□ -2.22
CSM4YPL200W MCM22P47167 239 aa1.16□□□□□ -2.22
CSM4YPL200W AIF1P52923 378 aa1.16□□□□□ -2.22
CSM4YPL200W YNL010WP53981 241 aaKnown RBP1.16□□□□□ -2.22
CSM4YPL200W REP2P03872 296 aa1.15□□□□□ -2.23
CSM4YPL200W YPR170W-BP0C5R9 85 aa1.15□□□□□ -2.23
CSM4YPL200W GPA2P10823 449 aa1.15□□□□□ -2.23
CSM4YPL200W YNL217WP40152 326 aa1.15□□□□□ -2.23
CSM4YPL200W TRM9P49957 279 aa1.15□□□□□ -2.23
CSM4YPL200W YML108WQ03759 105 aa1.15□□□□□ -2.23
CSM4YPL200W RIO1Q12196 484 aaKnown RBP1.15□□□□□ -2.23
CSM4YPL200W RPO26P20435 155 aa1.14□□□□□ -2.23
CSM4YPL200W URA8P38627 578 aaPredicted RBP1.14□□□□□ -2.23
CSM4YPL200W GAA1P39012 614 aa1.14□□□□□ -2.23
CSM4YPL200W DID2P69771 204 aa1.14□□□□□ -2.23
CSM4YPL200W YMD8Q03697 442 aa1.14□□□□□ -2.23
CSM4YPL200W INO80P53115 1489 aa1.13□□□□□ -2.23
CSM4YPL200W QCR8P08525 94 aa1.13□□□□□ -2.23
CSM4YPL200W MRPL25P23369 157 aa1.13□□□□□ -2.23
CSM4YPL200W NTF2P33331 125 aaKnown RBP1.13□□□□□ -2.23
CSM4YPL200W LDB7P38210 180 aa1.13□□□□□ -2.23
CSM4YPL200W CUE1P38428 203 aa1.13□□□□□ -2.23
CSM4YPL200W DOC1P53068 250 aa1.13□□□□□ -2.23
CSM4YPL200W SRL4Q03085 281 aa1.13□□□□□ -2.23
CSM4YPL200W LPP1Q04396 274 aa1.13□□□□□ -2.23
CSM4YPL200W BCY1P07278 416 aaKnown RBP1.12□□□□□ -2.23
CSM4YPL200W TMA19P35691 167 aaKnown RBP1.12□□□□□ -2.23
CSM4YPL200W DOG2P38773 246 aa1.12□□□□□ -2.23
CSM4YPL200W YNR077CP53758 84 aa1.12□□□□□ -2.23
CSM4YPL200W MED4Q12343 284 aa1.12□□□□□ -2.23
CSM4YPL200W YLR156WP0CE96 114 aa1.11□□□□□ -2.23
CSM4YPL200W YLR159WP0CE97 114 aa1.11□□□□□ -2.23
CSM4YPL200W YLR161WP0CE98 114 aa1.11□□□□□ -2.23
CSM4YPL200W CDC10P25342 322 aaKnown RBP1.11□□□□□ -2.23
CSM4YPL200W SRY1P36007 326 aa1.11□□□□□ -2.23
CSM4YPL200W TCD1P38756 429 aa1.11□□□□□ -2.23
CSM4YPL200W NUP84P52891 726 aa1.11□□□□□ -2.23
CSM4YPL200W NSA1P53136 463 aaPredicted RBP1.11□□□□□ -2.23
CSM4YPL200W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
CSM4YPL200W LSO2Q3E772 92 aaKnown RBP1.11□□□□□ -2.23
CSM4YPL200W PDR18P53756 1333 aa1.11□□□□□ -2.23
CSM4YPL200W SPT3P06844 337 aa1.1□□□□□ -2.23
CSM4YPL200W CPA1P07258 411 aaKnown RBP1.1□□□□□ -2.23
CSM4YPL200W MRPS28P21771 286 aa1.1□□□□□ -2.23
CSM4YPL200W FMC1P40491 155 aa1.1□□□□□ -2.23
CSM4YPL200W MPA43P53583 542 aaPredicted RBP1.1□□□□□ -2.23
CSM4YPL200W ANT1Q06497 328 aa1.1□□□□□ -2.23
CSM4YPL200W ATG22P25568 528 aa1.09□□□□□ -2.23
CSM4YPL200W YET1P35723 206 aa1.09□□□□□ -2.23
CSM4YPL200W UMP1P38293 148 aa1.09□□□□□ -2.23
CSM4YPL200W POP4P38336 279 aa1.09□□□□□ -2.23
CSM4YPL200W NUP57P48837 541 aa1.09□□□□□ -2.23
CSM4YPL200W SNZ1Q03148 297 aa1.09□□□□□ -2.23
CSM4YPL200W MATALPHA1P0CY06 175 aa1.08□□□□□ -2.24
CSM4YPL200W HMLALPHA1P0CY07 175 aa1.08□□□□□ -2.24
CSM4YPL200W MRPL17P36528 281 aa1.08□□□□□ -2.24
CSM4YPL200W RPC17P47076 161 aa1.08□□□□□ -2.24
CSM4YPL200W SAY1P53324 424 aa1.08□□□□□ -2.24
CSM4YPL200W SWP1Q02795 286 aa1.08□□□□□ -2.24
CSM4YPL200W YPL162CQ12042 273 aa1.08□□□□□ -2.24
CSM4YPL200W DRS2P39524 1355 aa1.08□□□□□ -2.24
CSM4YPL200W MET5P47169 1442 aa1.07□□□□□ -2.24
CSM4YPL200W VAR1P02381 398 aa1.07□□□□□ -2.24
CSM4YPL200W URA6P15700 204 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms