RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W RMR1P53060 241 aa2□□□□□ -2.09
MRPL40YPL173W NOP19P53317 196 aaPredicted RBP2□□□□□ -2.09
MRPL40YPL173W IGO1P53897 168 aa2□□□□□ -2.09
MRPL40YPL173W DID2P69771 204 aa2□□□□□ -2.09
MRPL40YPL173W SNZ1Q03148 297 aa2□□□□□ -2.09
MRPL40YPL173W PEX12Q04370 399 aa2□□□□□ -2.09
MRPL40YPL173W GRH1Q04410 372 aaKnown RBP2□□□□□ -2.09
MRPL40YPL173W YMR226CQ05016 267 aaKnown RBP2□□□□□ -2.09
MRPL40YPL173W ABP140Q08641 628 aaKnown RBP2□□□□□ -2.09
MRPL40YPL173W YPL257WQ08974 193 aa2□□□□□ -2.09
MRPL40YPL173W YRA1Q12159 226 aaKnown RBP2□□□□□ -2.09
MRPL40YPL173W CCH1P50077 2039 aa2□□□□□ -2.09
MRPL40YPL173W QCR7P00128 127 aa1.99□□□□□ -2.09
MRPL40YPL173W Q0255P03881 472 aa1.99□□□□□ -2.09
MRPL40YPL173W RPL26AP05743 127 aaKnown RBP1.99□□□□□ -2.09
MRPL40YPL173W TCA17P32613 152 aa1.99□□□□□ -2.09
MRPL40YPL173W ECM33P38248 429 aaKnown RBP1.99□□□□□ -2.09
MRPL40YPL173W YHR125WP38831 101 aa1.99□□□□□ -2.09
MRPL40YPL173W IRC22P40006 225 aa1.99□□□□□ -2.09
MRPL40YPL173W YER188WP40103 239 aa1.99□□□□□ -2.09
MRPL40YPL173W YJR056CP47115 236 aa1.99□□□□□ -2.09
MRPL40YPL173W YJR146WP47174 117 aa1.99□□□□□ -2.09
MRPL40YPL173W BXI1P48558 297 aa1.99□□□□□ -2.09
MRPL40YPL173W RPL26BP53221 127 aaKnown RBP1.99□□□□□ -2.09
MRPL40YPL173W PDR17P53844 350 aa1.99□□□□□ -2.09
MRPL40YPL173W YDR248CQ03786 193 aa1.99□□□□□ -2.09
MRPL40YPL173W YML096WQ04489 525 aa1.99□□□□□ -2.09
MRPL40YPL173W ATG38Q05789 226 aaKnown RBP1.99□□□□□ -2.09
MRPL40YPL173W HRT1Q08273 121 aa1.99□□□□□ -2.09
MRPL40YPL173W CLP1Q08685 445 aaPredicted RBP1.99□□□□□ -2.09
MRPL40YPL173W SAS5Q99314 248 aa1.99□□□□□ -2.09
MRPL40YPL173W DRS2P39524 1355 aa1.98□□□□□ -2.09
MRPL40YPL173W SEC4P07560 215 aaKnown RBP1.98□□□□□ -2.09
MRPL40YPL173W SCO1P23833 295 aa1.98□□□□□ -2.09
MRPL40YPL173W ADE1P27616 306 aa1.98□□□□□ -2.09
MRPL40YPL173W SPS18P32572 300 aa1.98□□□□□ -2.09
MRPL40YPL173W APS1P35181 156 aa1.98□□□□□ -2.09
MRPL40YPL173W YCR087C-AP37263 153 aa1.98□□□□□ -2.09
MRPL40YPL173W BMT5P40493 336 aa1.98□□□□□ -2.09
MRPL40YPL173W FIS1P40515 155 aa1.98□□□□□ -2.09
MRPL40YPL173W ARC15P40518 154 aaRIP-Chip data1.98□□□□□ -2.09not detected
MRPL40YPL173W FAR7P43592 221 aa1.98□□□□□ -2.09
MRPL40YPL173W ABF2Q02486 183 aa1.98□□□□□ -2.09
MRPL40YPL173W PET191Q02772 108 aa1.98□□□□□ -2.09
MRPL40YPL173W YOR020W-AQ3E824 90 aa1.98□□□□□ -2.09
MRPL40YPL173W YHR032W-AP0C5N6 59 aa1.97□□□□□ -2.09
MRPL40YPL173W ASF2P32448 525 aaPredicted RBP1.97□□□□□ -2.09
MRPL40YPL173W YBR063CP38083 404 aa1.97□□□□□ -2.09
MRPL40YPL173W GET1P53192 235 aa1.97□□□□□ -2.09
MRPL40YPL173W GIM3P53900 129 aa1.97□□□□□ -2.09
MRPL40YPL173W YNL010WP53981 241 aaKnown RBP1.97□□□□□ -2.09
MRPL40YPL173W ATG39Q06159 398 aa1.97□□□□□ -2.09
MRPL40YPL173W LSO2Q3E772 92 aaKnown RBP1.97□□□□□ -2.09
MRPL40YPL173W RAD9P14737 1309 aa1.96□□□□□ -2.1
MRPL40YPL173W GCN3P14741 305 aa1.96□□□□□ -2.1
MRPL40YPL173W FCY2P17064 533 aa1.96□□□□□ -2.1
MRPL40YPL173W GRX2P17695 143 aaKnown RBP1.96□□□□□ -2.1
MRPL40YPL173W CCA1P21269 546 aa1.96□□□□□ -2.1
MRPL40YPL173W YKR032WP36127 104 aa1.96□□□□□ -2.1
MRPL40YPL173W GRE3P38715 327 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
MRPL40YPL173W DOG2P38773 246 aa1.96□□□□□ -2.1
MRPL40YPL173W DOG1P38774 246 aa1.96□□□□□ -2.1
MRPL40YPL173W PRM8P53174 237 aa1.96□□□□□ -2.1
MRPL40YPL173W YMR279CQ03263 540 aa1.96□□□□□ -2.1
MRPL40YPL173W LPP1Q04396 274 aa1.96□□□□□ -2.1
MRPL40YPL173W VPS68Q12016 184 aa1.96□□□□□ -2.1
MRPL40YPL173W YPR096CO13587 100 aa1.95□□□□□ -2.1
MRPL40YPL173W RPL27AP0C2H6 136 aaKnown RBP1.95□□□□□ -2.1
MRPL40YPL173W RPL27BP0C2H7 136 aaKnown RBP1.95□□□□□ -2.1
MRPL40YPL173W MER1P16523 270 aa1.95□□□□□ -2.1
MRPL40YPL173W SCM4P32564 187 aa1.95□□□□□ -2.1
MRPL40YPL173W MED6P38782 295 aa1.95□□□□□ -2.1
MRPL40YPL173W YAR068WP39564 161 aa1.95□□□□□ -2.1
MRPL40YPL173W RSM25P40496 264 aa1.95□□□□□ -2.1
MRPL40YPL173W YRB2P40517 327 aa1.95□□□□□ -2.1
MRPL40YPL173W MRPL49P40858 161 aaPredicted RBP1.95□□□□□ -2.1
MRPL40YPL173W TLG1Q03322 224 aa1.95□□□□□ -2.1
MRPL40YPL173W TRM12Q04235 462 aa1.95□□□□□ -2.1
MRPL40YPL173W GGA1Q06336 557 aa1.95□□□□□ -2.1
MRPL40YPL173W RDS3Q06835 107 aaPredicted RBP1.95□□□□□ -2.1
MRPL40YPL173W AKR2Q12013 749 aa1.95□□□□□ -2.1
MRPL40YPL173W PSF1Q12488 208 aa1.95□□□□□ -2.1
MRPL40YPL173W RPL9AP05738 191 aaKnown RBP1.94□□□□□ -2.1
MRPL40YPL173W YPR170W-BP0C5R9 85 aa1.94□□□□□ -2.1
MRPL40YPL173W MRPL28P36527 147 aa1.94□□□□□ -2.1
MRPL40YPL173W RPL9BP51401 191 aaKnown RBP1.94□□□□□ -2.1
MRPL40YPL173W YGR050CP53231 118 aa1.94□□□□□ -2.1
MRPL40YPL173W YML108WQ03759 105 aa1.94□□□□□ -2.1
MRPL40YPL173W REP2P03872 296 aa1.93□□□□□ -2.1
MRPL40YPL173W CDC7P06243 507 aa1.93□□□□□ -2.1
MRPL40YPL173W ADH3P07246 375 aaKnown RBP1.93□□□□□ -2.1
MRPL40YPL173W SEC17P32602 292 aa1.93□□□□□ -2.1
MRPL40YPL173W CLB6P32943 380 aa1.93□□□□□ -2.1
MRPL40YPL173W UTP30P36144 274 aaKnown RBP1.93□□□□□ -2.1
MRPL40YPL173W YHL026CP38740 315 aa1.93□□□□□ -2.1
MRPL40YPL173W SNX4P47057 423 aa1.93□□□□□ -2.1
MRPL40YPL173W YGR026WP53217 278 aa1.93□□□□□ -2.1
MRPL40YPL173W COS6P53344 381 aa1.93□□□□□ -2.1
MRPL40YPL173W SLM2P53955 656 aa1.93□□□□□ -2.1
MRPL40YPL173W MIX17Q03667 156 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms