RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W COX5AP00424 153 aa1.81□□□□□ -2.12
PEP12YOR036W CDC28P00546 298 aaKnown RBP1.81□□□□□ -2.12
PEP12YOR036W RPL27AP0C2H6 136 aaKnown RBP1.81□□□□□ -2.12
PEP12YOR036W RPL27BP0C2H7 136 aaKnown RBP1.81□□□□□ -2.12
PEP12YOR036W CBF1P17106 351 aa1.81□□□□□ -2.12
PEP12YOR036W MIG1P27705 504 aa1.81□□□□□ -2.12
PEP12YOR036W RME1P32338 300 aaKnown RBP1.81□□□□□ -2.12
PEP12YOR036W SDH4P37298 181 aa1.81□□□□□ -2.12
PEP12YOR036W COG3P40094 801 aa1.81□□□□□ -2.12
PEP12YOR036W RSM25P40496 264 aa1.81□□□□□ -2.12
PEP12YOR036W FAR7P43592 221 aa1.81□□□□□ -2.12
PEP12YOR036W PIR5P46999 287 aa1.81□□□□□ -2.12
PEP12YOR036W YJL016WP47072 561 aa1.81□□□□□ -2.12
PEP12YOR036W YGL088WP53151 121 aa1.81□□□□□ -2.12
PEP12YOR036W GET1P53192 235 aa1.81□□□□□ -2.12
PEP12YOR036W PDR17P53844 350 aa1.81□□□□□ -2.12
PEP12YOR036W ABF2Q02486 183 aa1.81□□□□□ -2.12
PEP12YOR036W YML108WQ03759 105 aa1.81□□□□□ -2.12
PEP12YOR036W YDR248CQ03786 193 aa1.81□□□□□ -2.12
PEP12YOR036W PEX12Q04370 399 aa1.81□□□□□ -2.12
PEP12YOR036W YML096WQ04489 525 aa1.81□□□□□ -2.12
PEP12YOR036W NIP7Q08962 181 aaKnown RBP1.81□□□□□ -2.12
PEP12YOR036W YPL257WQ08974 193 aa1.81□□□□□ -2.12
PEP12YOR036W BBP1Q12365 385 aa1.81□□□□□ -2.12
PEP12YOR036W TUS1Q06412 1307 aa1.81□□□□□ -2.12
PEP12YOR036W Q0255P03881 472 aa1.8□□□□□ -2.12
PEP12YOR036W SEC4P07560 215 aaKnown RBP1.8□□□□□ -2.12
PEP12YOR036W KSS1P14681 368 aa1.8□□□□□ -2.12
PEP12YOR036W APA2P22108 325 aa1.8□□□□□ -2.12
PEP12YOR036W DBF2P22204 572 aa1.8□□□□□ -2.12
PEP12YOR036W TCA17P32613 152 aa1.8□□□□□ -2.12
PEP12YOR036W APS1P35181 156 aa1.8□□□□□ -2.12
PEP12YOR036W ECM4P36156 370 aa1.8□□□□□ -2.12
PEP12YOR036W YGP1P38616 354 aaKnown RBP1.8□□□□□ -2.12
PEP12YOR036W ARC15P40518 154 aaRIP-Chip data1.8□□□□□ -2.12not detected
PEP12YOR036W YJL144WP47009 104 aa1.8□□□□□ -2.12
PEP12YOR036W BXI1P48558 297 aa1.8□□□□□ -2.12
PEP12YOR036W NOP19P53317 196 aaPredicted RBP1.8□□□□□ -2.12
PEP12YOR036W YMR279CQ03263 540 aa1.8□□□□□ -2.12
PEP12YOR036W YOR020W-AQ3E824 90 aa1.8□□□□□ -2.12
PEP12YOR036W RAD9P14737 1309 aa1.8□□□□□ -2.12
PEP12YOR036W QCR7P00128 127 aa1.79□□□□□ -2.12
PEP12YOR036W RPL26AP05743 127 aaKnown RBP1.79□□□□□ -2.12
PEP12YOR036W DSF1P0CX08 502 aa1.79□□□□□ -2.12
PEP12YOR036W YNR073CP0CX09 502 aa1.79□□□□□ -2.12
PEP12YOR036W CCA1P21269 546 aa1.79□□□□□ -2.12
PEP12YOR036W ADE1P27616 306 aa1.79□□□□□ -2.12
PEP12YOR036W OAC1P32332 324 aa1.79□□□□□ -2.12
PEP12YOR036W YCR087C-AP37263 153 aa1.79□□□□□ -2.12
PEP12YOR036W ECM33P38248 429 aaKnown RBP1.79□□□□□ -2.12
PEP12YOR036W YHR125WP38831 101 aa1.79□□□□□ -2.12
PEP12YOR036W BMT5P40493 336 aa1.79□□□□□ -2.12
PEP12YOR036W FIS1P40515 155 aa1.79□□□□□ -2.12
PEP12YOR036W SMD3P43321 101 aaKnown RBP1.79□□□□□ -2.12
PEP12YOR036W PRM8P53174 237 aa1.79□□□□□ -2.12
PEP12YOR036W HOP2P53187 214 aa1.79□□□□□ -2.12
PEP12YOR036W RPL26BP53221 127 aaKnown RBP1.79□□□□□ -2.12
PEP12YOR036W SMD2Q06217 110 aaKnown RBP1.79□□□□□ -2.12
PEP12YOR036W CDD1Q06549 142 aa1.79□□□□□ -2.12
PEP12YOR036W SAS5Q99314 248 aa1.79□□□□□ -2.12
PEP12YOR036W DRS2P39524 1355 aa1.78□□□□□ -2.12
PEP12YOR036W ADH3P07246 375 aaKnown RBP1.78□□□□□ -2.12
PEP12YOR036W GCN3P14741 305 aa1.78□□□□□ -2.12
PEP12YOR036W DOG2P38773 246 aa1.78□□□□□ -2.12
PEP12YOR036W DOG1P38774 246 aa1.78□□□□□ -2.12
PEP12YOR036W CTR2P38865 189 aa1.78□□□□□ -2.12
PEP12YOR036W IRC22P40006 225 aa1.78□□□□□ -2.12
PEP12YOR036W YER188WP40103 239 aa1.78□□□□□ -2.12
PEP12YOR036W SSU72P53538 206 aaPredicted RBP1.78□□□□□ -2.12
PEP12YOR036W SCO1P23833 295 aa1.77□□□□□ -2.13
PEP12YOR036W ATP7P30902 174 aa1.77□□□□□ -2.13
PEP12YOR036W SCM4P32564 187 aa1.77□□□□□ -2.13
PEP12YOR036W SPS18P32572 300 aa1.77□□□□□ -2.13
PEP12YOR036W YBR063CP38083 404 aa1.77□□□□□ -2.13
PEP12YOR036W YAR068WP39564 161 aa1.77□□□□□ -2.13
PEP12YOR036W SEC72P39742 193 aaKnown RBP1.77□□□□□ -2.13
PEP12YOR036W MRPL49P40858 161 aaPredicted RBP1.77□□□□□ -2.13
PEP12YOR036W YGR026WP53217 278 aa1.77□□□□□ -2.13
PEP12YOR036W YNL010WP53981 241 aaKnown RBP1.77□□□□□ -2.13
PEP12YOR036W YMD8Q03697 442 aa1.77□□□□□ -2.13
PEP12YOR036W GIM5Q04493 163 aa1.77□□□□□ -2.13
PEP12YOR036W ATG39Q06159 398 aa1.77□□□□□ -2.13
PEP12YOR036W AKR2Q12013 749 aa1.77□□□□□ -2.13
PEP12YOR036W CMC2Q3E7A4 109 aa1.77□□□□□ -2.13
PEP12YOR036W YPR096CO13587 100 aa1.76□□□□□ -2.13
PEP12YOR036W FCY2P17064 533 aa1.76□□□□□ -2.13
PEP12YOR036W GRX2P17695 143 aaKnown RBP1.76□□□□□ -2.13
PEP12YOR036W YKR032WP36127 104 aa1.76□□□□□ -2.13
PEP12YOR036W MRPL28P36527 147 aa1.76□□□□□ -2.13
PEP12YOR036W GRE3P38715 327 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
PEP12YOR036W YHL026CP38740 315 aa1.76□□□□□ -2.13
PEP12YOR036W TRM5P38793 499 aa1.76□□□□□ -2.13
PEP12YOR036W EGD2P38879 174 aaKnown RBP1.76□□□□□ -2.13
PEP12YOR036W YIL001WP40560 513 aa1.76□□□□□ -2.13
PEP12YOR036W YJR146WP47174 117 aa1.76□□□□□ -2.13
PEP12YOR036W DIA1P54005 336 aa1.76□□□□□ -2.13
PEP12YOR036W LPP1Q04396 274 aa1.76□□□□□ -2.13
PEP12YOR036W HRT1Q08273 121 aa1.76□□□□□ -2.13
PEP12YOR036W IKI3Q06706 1349 aaKnown RBP1.75□□□□□ -2.13
PEP12YOR036W RPL9AP05738 191 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms