RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W LDB18Q07887 179 aa2.64□□□□□ -1.99
UBP8YMR223W CMD1P06787 147 aaKnown RBP2.63□□□□□ -1.99
UBP8YMR223W YKR104WP0CE69 306 aa2.63□□□□□ -1.99
UBP8YMR223W FCY2P17064 533 aa2.63□□□□□ -1.99
UBP8YMR223W ATG15P25641 520 aa2.63□□□□□ -1.99
UBP8YMR223W ALK2P32789 676 aaPredicted RBP2.63□□□□□ -1.99
UBP8YMR223W YBR285WP38354 144 aa2.63□□□□□ -1.99
UBP8YMR223W YHL049CP38722 271 aa2.63□□□□□ -1.99
UBP8YMR223W LSM4P40070 187 aaKnown RBP2.63□□□□□ -1.99
UBP8YMR223W AIM25P47140 327 aa2.63□□□□□ -1.99
UBP8YMR223W TPC1P53257 314 aa2.63□□□□□ -1.99
UBP8YMR223W HST4P53688 370 aa2.63□□□□□ -1.99
UBP8YMR223W YNL184CP53876 108 aa2.63□□□□□ -1.99
UBP8YMR223W UBC7Q02159 165 aa2.63□□□□□ -1.99
UBP8YMR223W PKR1Q03880 122 aaKnown RBP2.63□□□□□ -1.99
UBP8YMR223W SPG4Q04438 115 aa2.63□□□□□ -1.99
UBP8YMR223W YLR030WQ07967 263 aa2.63□□□□□ -1.99
UBP8YMR223W YOL160WQ08321 113 aa2.63□□□□□ -1.99
UBP8YMR223W MSA1Q08471 629 aa2.63□□□□□ -1.99
UBP8YMR223W PST2Q12335 198 aaKnown RBP2.63□□□□□ -1.99
UBP8YMR223W HMS1Q12398 434 aa2.63□□□□□ -1.99
UBP8YMR223W YDL199CQ12407 687 aa2.63□□□□□ -1.99
UBP8YMR223W YCR024C-BQ3E7Z8 88 aa2.63□□□□□ -1.99
UBP8YMR223W SUA7P29055 345 aaPredicted RBP2.62□□□□□ -1.99
UBP8YMR223W HEK2P38199 381 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
UBP8YMR223W TRR2P38816 342 aa2.62□□□□□ -1.99
UBP8YMR223W PEX22P39718 180 aa2.62□□□□□ -1.99
UBP8YMR223W GLE2P40066 365 aa2.62□□□□□ -1.99
UBP8YMR223W YNL320WP42840 284 aa2.62□□□□□ -1.99
UBP8YMR223W MOB2P43563 287 aa2.62□□□□□ -1.99
UBP8YMR223W GPI14P47088 403 aaKnown RBP2.62□□□□□ -1.99
UBP8YMR223W YJR015WP47090 510 aa2.62□□□□□ -1.99
UBP8YMR223W COQ5P49017 307 aa2.62□□□□□ -1.99
UBP8YMR223W COG7P53195 279 aa2.62□□□□□ -1.99
UBP8YMR223W YGR018CP53211 109 aa2.62□□□□□ -1.99
UBP8YMR223W ARL3Q02804 198 aa2.62□□□□□ -1.99
UBP8YMR223W MAK3Q03503 176 aa2.62□□□□□ -1.99
UBP8YMR223W YET2Q04210 160 aa2.62□□□□□ -1.99
UBP8YMR223W DTD1Q07648 150 aaKnown RBP2.62□□□□□ -1.99
UBP8YMR223W YLR046CQ12253 270 aa2.62□□□□□ -1.99
UBP8YMR223W YAL064W-BO13512 126 aa2.61□□□□□ -1.99
UBP8YMR223W YOR304C-AO14468 76 aa2.61□□□□□ -1.99
UBP8YMR223W RSA4P25382 515 aaKnown RBP2.61□□□□□ -1.99
UBP8YMR223W ERG24P32462 438 aaKnown RBP2.61□□□□□ -1.99
UBP8YMR223W AEP1P32493 518 aa2.61□□□□□ -1.99
UBP8YMR223W FMP23P38231 175 aa2.61□□□□□ -1.99
UBP8YMR223W RCK1P38622 512 aa2.61□□□□□ -1.99
UBP8YMR223W DOG2P38773 246 aa2.61□□□□□ -1.99
UBP8YMR223W DOG1P38774 246 aa2.61□□□□□ -1.99
UBP8YMR223W SPL2P38839 148 aa2.61□□□□□ -1.99
UBP8YMR223W CHL4P38907 458 aa2.61□□□□□ -1.99
UBP8YMR223W TIM17P39515 158 aa2.61□□□□□ -1.99
UBP8YMR223W YNL046WP53956 172 aa2.61□□□□□ -1.99
UBP8YMR223W ACT1P60010 375 aaKnown RBP2.61□□□□□ -1.99
UBP8YMR223W RUB1Q03919 77 aa2.61□□□□□ -1.99
UBP8YMR223W MIM1Q08176 113 aa2.61□□□□□ -1.99
UBP8YMR223W YPL225WQ08971 146 aaKnown RBP2.61□□□□□ -1.99
UBP8YMR223W YPS3Q12303 508 aa2.61□□□□□ -1.99
UBP8YMR223W TFC7Q12415 435 aa2.61□□□□□ -1.99
UBP8YMR223W YHR214C-EQ8TGK0 99 aa2.61□□□□□ -1.99
UBP8YMR223W TAF2P23255 1407 aa2.61□□□□□ -1.99
UBP8YMR223W MDS3P53094 1487 aa2.61□□□□□ -1.99
UBP8YMR223W HIS3P06633 220 aa2.6□□□□□ -1.99
UBP8YMR223W SEC4P07560 215 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W RPL23AP0CX41 137 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W RPL23BP0CX42 137 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W RPL2AP0CX45 254 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W RPL2BP0CX46 254 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W MRPL20P22354 195 aaPredicted RBP2.6□□□□□ -1.99
UBP8YMR223W RPS1BP23248 255 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W YCR025CP25352 136 aa2.6□□□□□ -1.99
UBP8YMR223W AHC2P25649 128 aa2.6□□□□□ -1.99
UBP8YMR223W SUI1P32911 108 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W GPX1P36014 167 aa2.6□□□□□ -1.99
UBP8YMR223W MRPL17P36528 281 aa2.6□□□□□ -1.99
UBP8YMR223W SOL2P37262 315 aa2.6□□□□□ -1.99
UBP8YMR223W MBA1P38300 278 aa2.6□□□□□ -1.99
UBP8YMR223W TRS20P38334 175 aa2.6□□□□□ -1.99
UBP8YMR223W YGP1P38616 354 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W HEM14P40012 539 aa2.6□□□□□ -1.99
UBP8YMR223W YER186CP40101 306 aa2.6□□□□□ -1.99
UBP8YMR223W PEX17P40155 199 aa2.6□□□□□ -1.99
UBP8YMR223W HAC1P41546 238 aa2.6□□□□□ -1.99
UBP8YMR223W RBL2P48606 106 aaKnown RBP2.6□□□□□ -1.99
UBP8YMR223W SOL1P50278 321 aa2.6□□□□□ -1.99
UBP8YMR223W YGL034CP53186 121 aa2.6□□□□□ -1.99
UBP8YMR223W YML018CQ03730 393 aa2.6□□□□□ -1.99
UBP8YMR223W YDR278CQ05612 105 aa2.6□□□□□ -1.99
UBP8YMR223W PRM4Q12498 284 aa2.6□□□□□ -1.99
UBP8YMR223W MHT1Q12525 324 aa2.6□□□□□ -1.99
UBP8YMR223W SLO1Q3E784 85 aa2.6□□□□□ -1.99
UBP8YMR223W PIS1P06197 220 aaKnown RBP2.59□□□□□ -1.99
UBP8YMR223W CBP6P07253 162 aaPredicted RBP2.59□□□□□ -1.99
UBP8YMR223W ERD2P18414 219 aa2.59□□□□□ -1.99
UBP8YMR223W RPB5P20434 215 aa2.59□□□□□ -1.99
UBP8YMR223W PEX34P25584 144 aa2.59□□□□□ -1.99
UBP8YMR223W CDC50P25656 391 aa2.59□□□□□ -1.99
UBP8YMR223W LHP1P33399 275 aaKnown RBP2.59□□□□□ -1.99
UBP8YMR223W POP4P38336 279 aa2.59□□□□□ -1.99
UBP8YMR223W FCY21P40039 528 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms