RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C PDS1P40316 373 aaPredicted RBP3.07□□□□□ -1.92
SSO2YMR183C STB1P42845 420 aa3.07□□□□□ -1.92
SSO2YMR183C JAC1P53193 184 aa3.07□□□□□ -1.92
SSO2YMR183C RNH201P53942 307 aa3.07□□□□□ -1.92
SSO2YMR183C YNL046WP53956 172 aa3.07□□□□□ -1.92
SSO2YMR183C YDR124WQ04608 324 aa3.07□□□□□ -1.92
SSO2YMR183C YMR315WQ04869 349 aaKnown RBP3.07□□□□□ -1.92
SSO2YMR183C YOL024WQ08172 172 aa3.07□□□□□ -1.92
SSO2YMR183C MDM32Q12171 622 aa3.07□□□□□ -1.92
SSO2YMR183C EMP46Q12396 444 aa3.07□□□□□ -1.92
SSO2YMR183C IZH2Q12442 317 aa3.07□□□□□ -1.92
SSO2YMR183C PSK1P31374 1356 aa3.07□□□□□ -1.92
SSO2YMR183C PDR12Q02785 1511 aa3.07□□□□□ -1.92
SSO2YMR183C DOP1Q03921 1698 aa3.07□□□□□ -1.92
SSO2YMR183C ERD2P18414 219 aa3.06□□□□□ -1.92
SSO2YMR183C LDB16P25587 256 aa3.06□□□□□ -1.92
SSO2YMR183C MGT1P26188 188 aa3.06□□□□□ -1.92
SSO2YMR183C SNQ2P32568 1501 aaKnown RBP3.06□□□□□ -1.92
SSO2YMR183C SOL2P37262 315 aa3.06□□□□□ -1.92
SSO2YMR183C SHE1P38200 338 aa3.06□□□□□ -1.92
SSO2YMR183C ECM14P38836 430 aa3.06□□□□□ -1.92
SSO2YMR183C SPL2P38839 148 aa3.06□□□□□ -1.92
SSO2YMR183C PTH1P38876 190 aaKnown RBP3.06□□□□□ -1.92
SSO2YMR183C PEX17P40155 199 aa3.06□□□□□ -1.92
SSO2YMR183C YGR042WP53227 271 aa3.06□□□□□ -1.92
SSO2YMR183C NQM1P53228 333 aaPredicted RBP3.06□□□□□ -1.92
SSO2YMR183C AAH1P53909 347 aa3.06□□□□□ -1.92
SSO2YMR183C ECM11Q04110 302 aa3.06□□□□□ -1.92
SSO2YMR183C NNT1Q05874 261 aa3.06□□□□□ -1.92
SSO2YMR183C TRM3Q07527 1436 aa3.06□□□□□ -1.92
SSO2YMR183C YOR186WQ08560 144 aa3.06□□□□□ -1.92
SSO2YMR183C YOR376WQ08900 122 aa3.06□□□□□ -1.92
SSO2YMR183C YLR053CQ12026 108 aa3.06□□□□□ -1.92
SSO2YMR183C NSL1Q12143 216 aa3.06□□□□□ -1.92
SSO2YMR183C YLR050CQ12155 161 aaKnown RBP3.06□□□□□ -1.92
SSO2YMR183C RPL21BQ12672 160 aaKnown RBP3.06□□□□□ -1.92
SSO2YMR183C LSO2Q3E772 92 aaKnown RBP3.06□□□□□ -1.92
SSO2YMR183C YER078W-AQ3E7A2 54 aa3.06□□□□□ -1.92
SSO2YMR183C ULS1Q08562 1619 aa3.05□□□□□ -1.92
SSO2YMR183C CDC50P25656 391 aa3.05□□□□□ -1.92
SSO2YMR183C YKR041WP36134 250 aa3.05□□□□□ -1.92
SSO2YMR183C EFM1P38732 585 aa3.05□□□□□ -1.92
SSO2YMR183C EDC3P39998 551 aaKnown RBP3.05□□□□□ -1.92
SSO2YMR183C RSM25P40496 264 aa3.05□□□□□ -1.92
SSO2YMR183C AGE2P40529 298 aa3.05□□□□□ -1.92
SSO2YMR183C AIM25P47140 327 aa3.05□□□□□ -1.92
SSO2YMR183C FMP48P53233 369 aa3.05□□□□□ -1.92
SSO2YMR183C ARO80Q04052 950 aa3.05□□□□□ -1.92
SSO2YMR183C YPR127WQ06494 345 aa3.05□□□□□ -1.92
SSO2YMR183C STU1P38198 1513 aa3.04□□□□□ -1.92
SSO2YMR183C CLG1P35190 452 aa3.04□□□□□ -1.92
SSO2YMR183C PHO89P38361 574 aa3.04□□□□□ -1.92
SSO2YMR183C OXA1P39952 402 aa3.04□□□□□ -1.92
SSO2YMR183C YFL064CP43540 174 aa3.04□□□□□ -1.92
SSO2YMR183C FAR7P43592 221 aa3.04□□□□□ -1.92
SSO2YMR183C YGL204CP53089 101 aa3.04□□□□□ -1.92
SSO2YMR183C YDR115WQ04598 105 aa3.04□□□□□ -1.92
SSO2YMR183C PBA1Q05778 276 aa3.04□□□□□ -1.92
SSO2YMR183C IRC25Q07951 179 aa3.04□□□□□ -1.92
SSO2YMR183C YLR030WQ07967 263 aa3.04□□□□□ -1.92
SSO2YMR183C YLR031WQ07978 186 aa3.04□□□□□ -1.92
SSO2YMR183C MSA1Q08471 629 aa3.04□□□□□ -1.92
SSO2YMR183C RRG7Q08774 242 aaPredicted RBP3.04□□□□□ -1.92
SSO2YMR183C PEX11Q12462 236 aa3.04□□□□□ -1.92
SSO2YMR183C YBL008W-AQ3E821 79 aa3.04□□□□□ -1.92
SSO2YMR183C YPL229WQ99395 206 aa3.04□□□□□ -1.92
SSO2YMR183C PDR15Q04182 1529 aaKnown RBP3.03□□□□□ -1.92
SSO2YMR183C GDB1Q06625 1536 aa3.03□□□□□ -1.92
SSO2YMR183C PET54P10834 293 aa3.03□□□□□ -1.92
SSO2YMR183C SPT15P13393 240 aaKnown RBP3.03□□□□□ -1.92
SSO2YMR183C GRX2P17695 143 aaKnown RBP3.03□□□□□ -1.92
SSO2YMR183C AAT2P23542 418 aaKnown RBP3.03□□□□□ -1.92
SSO2YMR183C ERG2P32352 222 aa3.03□□□□□ -1.92
SSO2YMR183C MDH3P32419 343 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SSO2YMR183C ARN2P38724 620 aa3.03□□□□□ -1.92
SSO2YMR183C TIM17P39515 158 aa3.03□□□□□ -1.92
SSO2YMR183C EDC2P40023 145 aaPredicted RBP3.03□□□□□ -1.92
SSO2YMR183C ILM1P47155 203 aa3.03□□□□□ -1.92
SSO2YMR183C YGL034CP53186 121 aa3.03□□□□□ -1.92
SSO2YMR183C RPL21AQ02753 160 aaKnown RBP3.03□□□□□ -1.92
SSO2YMR183C MRX11Q03079 207 aa3.03□□□□□ -1.92
SSO2YMR183C MAK3Q03503 176 aa3.03□□□□□ -1.92
SSO2YMR183C HRI1Q05905 244 aaKnown RBP3.03□□□□□ -1.92
SSO2YMR183C ARO1P08566 1588 aaKnown RBP3.03□□□□□ -1.92
SSO2YMR183C IQG1Q12280 1495 aa3.03□□□□□ -1.93
SSO2YMR183C DNF3Q12674 1656 aa3.02□□□□□ -1.93
SSO2YMR183C SWI1P09547 1314 aa3.02□□□□□ -1.93
SSO2YMR183C RPL25P04456 142 aaKnown RBP3.02□□□□□ -1.93
SSO2YMR183C CMD1P06787 147 aaKnown RBP3.02□□□□□ -1.93
SSO2YMR183C COS2P0CX12 379 aa3.02□□□□□ -1.93
SSO2YMR183C COS3P0CX13 379 aa3.02□□□□□ -1.93
SSO2YMR183C SEC22P22214 214 aa3.02□□□□□ -1.93
SSO2YMR183C ARO7P32178 256 aa3.02□□□□□ -1.93
SSO2YMR183C PTM1P32857 523 aa3.02□□□□□ -1.93
SSO2YMR183C SHE3P38272 425 aaKnown RBP3.02□□□□□ -1.93
SSO2YMR183C SSH1P38353 490 aaKnown RBP3.02□□□□□ -1.93
SSO2YMR183C NVJ1P38881 321 aa3.02□□□□□ -1.93
SSO2YMR183C BAT1P38891 393 aaKnown RBP3.02□□□□□ -1.93
SSO2YMR183C LSM4P40070 187 aaKnown RBP3.02□□□□□ -1.93
SSO2YMR183C COS4P43542 379 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms