RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C EGD2P38879 174 aaKnown RBP2.38□□□□□ -2.03
VPS9YML097C YEL075CP39972 122 aa2.38□□□□□ -2.03
VPS9YML097C YMD8Q03697 442 aa2.38□□□□□ -2.03
VPS9YML097C GIM5Q04493 163 aa2.38□□□□□ -2.03
VPS9YML097C INM2Q05533 292 aa2.38□□□□□ -2.03
VPS9YML097C SMD2Q06217 110 aaKnown RBP2.38□□□□□ -2.03
VPS9YML097C YPR063CQ12160 140 aa2.38□□□□□ -2.03
VPS9YML097C MDM32Q12171 622 aa2.38□□□□□ -2.03
VPS9YML097C YHR214C-EQ8TGK0 99 aa2.38□□□□□ -2.03
VPS9YML097C SOD1P00445 154 aaKnown RBP2.37□□□□□ -2.03
VPS9YML097C YPR170W-BP0C5R9 85 aa2.37□□□□□ -2.03
VPS9YML097C PTM1P32857 523 aa2.37□□□□□ -2.03
VPS9YML097C YPT52P36018 234 aaKnown RBP2.37□□□□□ -2.03
VPS9YML097C YIR035CP40579 254 aa2.37□□□□□ -2.03
VPS9YML097C AIM25P47140 327 aa2.37□□□□□ -2.03
VPS9YML097C PRM15Q03262 622 aa2.37□□□□□ -2.03
VPS9YML097C EMP46Q12396 444 aa2.37□□□□□ -2.03
VPS9YML097C CAF4P36130 643 aa2.36□□□□□ -2.03
VPS9YML097C MRPL28P36527 147 aa2.36□□□□□ -2.03
VPS9YML097C DOG2P38773 246 aa2.36□□□□□ -2.03
VPS9YML097C DOG1P38774 246 aa2.36□□□□□ -2.03
VPS9YML097C ECM14P38836 430 aa2.36□□□□□ -2.03
VPS9YML097C YAR068WP39564 161 aa2.36□□□□□ -2.03
VPS9YML097C RMD6P39975 231 aa2.36□□□□□ -2.03
VPS9YML097C ERG10P41338 398 aaKnown RBP2.36□□□□□ -2.03
VPS9YML097C FAR7P43592 221 aa2.36□□□□□ -2.03
VPS9YML097C GON7P46984 123 aa2.36□□□□□ -2.03
VPS9YML097C YJR056CP47115 236 aa2.36□□□□□ -2.03
VPS9YML097C PRM8P53174 237 aa2.36□□□□□ -2.03
VPS9YML097C FUS2Q05670 677 aa2.36□□□□□ -2.03
VPS9YML097C YOL160WQ08321 113 aa2.36□□□□□ -2.03
VPS9YML097C NIP7Q08962 181 aaKnown RBP2.36□□□□□ -2.03
VPS9YML097C YOR020W-AQ3E824 90 aa2.36□□□□□ -2.03
VPS9YML097C ZWF1P11412 505 aaKnown RBP2.36□□□□□ -2.03
VPS9YML097C ECM33P38248 429 aaKnown RBP2.36□□□□□ -2.03
VPS9YML097C SRP14P38985 146 aa2.36□□□□□ -2.03
VPS9YML097C COG3P40094 801 aa2.36□□□□□ -2.03
VPS9YML097C FIS1P40515 155 aa2.36□□□□□ -2.03
VPS9YML097C PET191Q02772 108 aa2.36□□□□□ -2.03
VPS9YML097C SNO1Q03144 224 aa2.36□□□□□ -2.03
VPS9YML097C YMR279CQ03263 540 aa2.36□□□□□ -2.03
VPS9YML097C YML108WQ03759 105 aa2.36□□□□□ -2.03
VPS9YML097C YDR114CQ04597 100 aa2.36□□□□□ -2.03
VPS9YML097C FCF1Q05498 189 aaPredicted RBP2.36□□□□□ -2.03
VPS9YML097C YNG1Q08465 219 aa2.36□□□□□ -2.03
VPS9YML097C LSO2Q3E772 92 aaKnown RBP2.36□□□□□ -2.03
VPS9YML097C TDA8Q6B2U8 126 aa2.36□□□□□ -2.03
VPS9YML097C IGO2Q9P305 131 aa2.36□□□□□ -2.03
VPS9YML097C RPS23AP0CX29 145 aaKnown RBP2.35□□□□□ -2.03
VPS9YML097C RPS23BP0CX30 145 aa2.35□□□□□ -2.03
VPS9YML097C COS8P38723 381 aa2.35□□□□□ -2.03
VPS9YML097C YIP3P53633 176 aa2.35□□□□□ -2.03
VPS9YML097C GAS3Q03655 524 aa2.35□□□□□ -2.03
VPS9YML097C GRH1Q04410 372 aaKnown RBP2.35□□□□□ -2.03
VPS9YML097C ATG39Q06159 398 aa2.35□□□□□ -2.03
VPS9YML097C NOT5Q12514 560 aaPredicted RBP2.35□□□□□ -2.03
VPS9YML097C IKI3Q06706 1349 aaKnown RBP2.34□□□□□ -2.04
VPS9YML097C RPL25P04456 142 aaKnown RBP2.34□□□□□ -2.04
VPS9YML097C HIS3P06633 220 aa2.34□□□□□ -2.04
VPS9YML097C TRX3P25372 127 aa2.34□□□□□ -2.04
VPS9YML097C YBR063CP38083 404 aa2.34□□□□□ -2.04
VPS9YML097C RPF1P38805 295 aaKnown RBP2.34□□□□□ -2.04
VPS9YML097C AST2P39945 430 aaKnown RBP2.34□□□□□ -2.04
VPS9YML097C POG1P40473 351 aa2.34□□□□□ -2.04
VPS9YML097C BUD13P46947 266 aaPredicted RBP2.34□□□□□ -2.04
VPS9YML097C ABF2Q02486 183 aa2.34□□□□□ -2.04
VPS9YML097C GRX8Q05926 109 aa2.34□□□□□ -2.04
VPS9YML097C NOC4Q06512 552 aaPredicted RBP2.34□□□□□ -2.04
VPS9YML097C USB1Q12208 290 aaKnown RBP2.34□□□□□ -2.04
VPS9YML097C MRS1P07266 363 aa2.33□□□□□ -2.04
VPS9YML097C SGA1P08019 549 aa2.33□□□□□ -2.04
VPS9YML097C PUT1P09368 476 aa2.33□□□□□ -2.04
VPS9YML097C YHR032W-AP0C5N6 59 aa2.33□□□□□ -2.04
VPS9YML097C RPL35AP0CX84 120 aaKnown RBP2.33□□□□□ -2.04
VPS9YML097C RPL35BP0CX85 120 aaKnown RBP2.33□□□□□ -2.04
VPS9YML097C GCY1P14065 312 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
VPS9YML097C VPS51P36116 164 aa2.33□□□□□ -2.04
VPS9YML097C SHG1P38337 142 aa2.33□□□□□ -2.04
VPS9YML097C PIR5P46999 287 aa2.33□□□□□ -2.04
VPS9YML097C YJR141WP47172 347 aaPredicted RBP2.33□□□□□ -2.04
VPS9YML097C LSM7P53905 115 aaKnown RBP2.33□□□□□ -2.04
VPS9YML097C RSM10Q03201 203 aa2.33□□□□□ -2.04
VPS9YML097C LPP1Q04396 274 aa2.33□□□□□ -2.04
VPS9YML097C YET3Q07451 203 aa2.33□□□□□ -2.04
VPS9YML097C AGC1Q12482 902 aa2.33□□□□□ -2.04
VPS9YML097C ADH3P07246 375 aaKnown RBP2.32□□□□□ -2.04
VPS9YML097C ATG22P25568 528 aa2.32□□□□□ -2.04
VPS9YML097C TAH1P25638 111 aaPredicted RBP2.32□□□□□ -2.04
VPS9YML097C YKR032WP36127 104 aa2.32□□□□□ -2.04
VPS9YML097C YHR125WP38831 101 aa2.32□□□□□ -2.04
VPS9YML097C RPA43P46669 326 aa2.32□□□□□ -2.04
VPS9YML097C OST2P46964 130 aa2.32□□□□□ -2.04
VPS9YML097C NRK1P53915 240 aa2.32□□□□□ -2.04
VPS9YML097C YLR036CQ07986 203 aa2.32□□□□□ -2.04
VPS9YML097C CDC7P06243 507 aa2.31□□□□□ -2.04
VPS9YML097C SIR2P06700 562 aa2.31□□□□□ -2.04
VPS9YML097C SEC4P07560 215 aaKnown RBP2.31□□□□□ -2.04
VPS9YML097C VMA11P32842 164 aa2.31□□□□□ -2.04
VPS9YML097C IRC22P40006 225 aa2.31□□□□□ -2.04
VPS9YML097C YER188WP40103 239 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms