RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YJR056CP47115 236 aa1.21□□□□□ -2.22
SGD1YLR336C ILM1P47155 203 aa1.21□□□□□ -2.22
SGD1YLR336C GIS3Q12418 502 aa1.21□□□□□ -2.22
SGD1YLR336C PUT1P09368 476 aa1.2□□□□□ -2.22
SGD1YLR336C URA6P15700 204 aa1.2□□□□□ -2.22
SGD1YLR336C CBT1P36038 271 aaPredicted RBP1.2□□□□□ -2.22
SGD1YLR336C DOG1P38774 246 aa1.2□□□□□ -2.22
SGD1YLR336C YAR068WP39564 161 aa1.2□□□□□ -2.22
SGD1YLR336C IRC22P40006 225 aa1.2□□□□□ -2.22
SGD1YLR336C COX15P40086 486 aa1.2□□□□□ -2.22
SGD1YLR336C GCN20P43535 752 aaKnown RBP1.2□□□□□ -2.22
SGD1YLR336C MIC26P50087 233 aa1.2□□□□□ -2.22
SGD1YLR336C ARR2Q06597 130 aa1.2□□□□□ -2.22
SGD1YLR336C ATO3Q12359 275 aa1.2□□□□□ -2.22
SGD1YLR336C SEY1Q99287 776 aa1.2□□□□□ -2.22
SGD1YLR336C RPL9AP05738 191 aaKnown RBP1.2□□□□□ -2.22
SGD1YLR336C ADH3P07246 375 aaKnown RBP1.2□□□□□ -2.22
SGD1YLR336C PRE6P40303 254 aaKnown RBP1.2□□□□□ -2.22
SGD1YLR336C RPL9BP51401 191 aaKnown RBP1.2□□□□□ -2.22
SGD1YLR336C HEM25Q07534 307 aa1.2□□□□□ -2.22
SGD1YLR336C RUD3Q12234 484 aaKnown RBP1.2□□□□□ -2.22
SGD1YLR336C YDR157WA0A023PZE8 133 aa1.19□□□□□ -2.22
SGD1YLR336C CDC28P00546 298 aaKnown RBP1.19□□□□□ -2.22
SGD1YLR336C NHP6BP11633 99 aaKnown RBP1.19□□□□□ -2.22
SGD1YLR336C DBF2P22204 572 aa1.19□□□□□ -2.22
SGD1YLR336C TCD1P38756 429 aa1.19□□□□□ -2.22
SGD1YLR336C DRS2P39524 1355 aa1.19□□□□□ -2.22
SGD1YLR336C YNL194CP40169 301 aa1.19□□□□□ -2.22
SGD1YLR336C ABF2Q02486 183 aa1.19□□□□□ -2.22
SGD1YLR336C MRPS8Q03799 155 aa1.19□□□□□ -2.22
SGD1YLR336C KOG1P38873 1557 aa1.19□□□□□ -2.22
SGD1YLR336C YBR121C-AP0C5L4 52 aa1.19□□□□□ -2.22
SGD1YLR336C PRP18P33411 251 aaPredicted RBP1.19□□□□□ -2.22
SGD1YLR336C YHR180WP38868 163 aa1.19□□□□□ -2.22
SGD1YLR336C RAD17P48581 401 aa1.19□□□□□ -2.22
SGD1YLR336C FYV6P53913 173 aa1.19□□□□□ -2.22
SGD1YLR336C TRM12Q04235 462 aa1.19□□□□□ -2.22
SGD1YLR336C SSQ1Q05931 657 aaPredicted RBP1.19□□□□□ -2.22
SGD1YLR336C DCN1Q12395 269 aa1.19□□□□□ -2.22
SGD1YLR336C BEM2P39960 2167 aaKnown RBP1.18□□□□□ -2.22
SGD1YLR336C CDC33P07260 213 aaKnown RBP1.18□□□□□ -2.22
SGD1YLR336C YPR170W-BP0C5R9 85 aa1.18□□□□□ -2.22
SGD1YLR336C COQ1P18900 473 aa1.18□□□□□ -2.22
SGD1YLR336C SCL1P21243 252 aaKnown RBP1.18□□□□□ -2.22
SGD1YLR336C OAC1P32332 324 aa1.18□□□□□ -2.22
SGD1YLR336C SSO1P32867 290 aa1.18□□□□□ -2.22
SGD1YLR336C NUP57P48837 541 aa1.18□□□□□ -2.22
SGD1YLR336C BRR6P53062 197 aa1.18□□□□□ -2.22
SGD1YLR336C PSF1Q12488 208 aa1.18□□□□□ -2.22
SGD1YLR336C SWR1Q05471 1514 aa1.18□□□□□ -2.22
SGD1YLR336C RPL28P02406 149 aaKnown RBP1.18□□□□□ -2.22
SGD1YLR336C MSW1P04803 379 aa1.18□□□□□ -2.22
SGD1YLR336C YIL001WP40560 513 aa1.18□□□□□ -2.22
SGD1YLR336C PRM10P42946 383 aa1.18□□□□□ -2.22
SGD1YLR336C ADO1P47143 340 aaKnown RBP1.18□□□□□ -2.22
SGD1YLR336C CWC23P52868 283 aaPredicted RBP1.18□□□□□ -2.22
SGD1YLR336C MGA1P53050 456 aa1.18□□□□□ -2.22
SGD1YLR336C PRM15Q03262 622 aa1.18□□□□□ -2.22
SGD1YLR336C LPP1Q04396 274 aa1.18□□□□□ -2.22
SGD1YLR336C SPG3Q04398 127 aaPredicted RBP1.18□□□□□ -2.22
SGD1YLR336C NEJ1Q06148 342 aa1.18□□□□□ -2.22
SGD1YLR336C DNF1P32660 1571 aa1.18□□□□□ -2.22
SGD1YLR336C PEX4P29340 183 aa1.17□□□□□ -2.22
SGD1YLR336C DOG2P38773 246 aa1.17□□□□□ -2.22
SGD1YLR336C CIS3P47001 227 aa1.17□□□□□ -2.22
SGD1YLR336C PGA2P53903 129 aa1.17□□□□□ -2.22
SGD1YLR336C DID2P69771 204 aa1.17□□□□□ -2.22
SGD1YLR336C CDC8P00572 216 aa1.17□□□□□ -2.22
SGD1YLR336C STE18P18852 110 aa1.17□□□□□ -2.22
SGD1YLR336C MDH3P32419 343 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
SGD1YLR336C TAF14P35189 244 aa1.17□□□□□ -2.22
SGD1YLR336C YRB1P41920 201 aaKnown RBP1.17□□□□□ -2.22
SGD1YLR336C BXI1P48558 297 aa1.17□□□□□ -2.22
SGD1YLR336C YGR219WP53307 113 aa1.17□□□□□ -2.22
SGD1YLR336C YNL010WP53981 241 aaKnown RBP1.17□□□□□ -2.22
SGD1YLR336C YDR248CQ03786 193 aa1.17□□□□□ -2.22
SGD1YLR336C GRX3Q03835 250 aa1.17□□□□□ -2.22
SGD1YLR336C REP2P03872 296 aa1.17□□□□□ -2.22
SGD1YLR336C CDC36P06100 191 aaPredicted RBP1.17□□□□□ -2.22
SGD1YLR336C PRX1P34227 261 aaKnown RBP1.17□□□□□ -2.22
SGD1YLR336C PHO88P38264 188 aaPredicted RBP1.17□□□□□ -2.22
SGD1YLR336C SIP3P38717 1229 aa1.17□□□□□ -2.22
SGD1YLR336C DAD3P69850 94 aa1.17□□□□□ -2.22
SGD1YLR336C YMD8Q03697 442 aa1.17□□□□□ -2.22
SGD1YLR336C JLP1Q12358 412 aa1.17□□□□□ -2.22
SGD1YLR336C PET191Q02772 108 aa1.16□□□□□ -2.22
SGD1YLR336C NCB2Q92317 146 aa1.16□□□□□ -2.22
SGD1YLR336C YLR156WP0CE96 114 aa1.16□□□□□ -2.22
SGD1YLR336C YLR159WP0CE97 114 aa1.16□□□□□ -2.22
SGD1YLR336C YLR161WP0CE98 114 aa1.16□□□□□ -2.22
SGD1YLR336C FBA1P14540 359 aaKnown RBP1.16□□□□□ -2.22
SGD1YLR336C ERV15P38312 142 aa1.16□□□□□ -2.22
SGD1YLR336C GAS3Q03655 524 aa1.16□□□□□ -2.22
SGD1YLR336C LSO2Q3E772 92 aaKnown RBP1.16□□□□□ -2.22
SGD1YLR336C TDA8Q6B2U8 126 aa1.16□□□□□ -2.22
SGD1YLR336C TCA17P32613 152 aa1.15□□□□□ -2.23
SGD1YLR336C APS1P35181 156 aa1.15□□□□□ -2.23
SGD1YLR336C RSM25P40496 264 aa1.15□□□□□ -2.23
SGD1YLR336C FAR7P43592 221 aa1.15□□□□□ -2.23
SGD1YLR336C PRM8P53174 237 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms