RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	SPT15	P13393	240 aa	Known RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	RPS5	P26783	225 aa	Known RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	FUN26	P31381	517 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	SMB1	P40018	196 aa	Known RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	YMR134W	P40207	237 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	GLR1	P41921	483 aa	Known RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	JHD2	P47156	728 aa	Predicted RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	COQ5	P49017	307 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	RSM27	P53305	110 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
YCS4	YLR272C	HRD1	Q08109	551 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	TIR4	Q12218	487 aa	Predicted RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	HRT3	Q12347	344 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	SEC7	P11075	2009 aa	Known RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	IML1	P47170	1584 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	GCN3	P14741	305 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	VPS21	P36017	210 aa	Known RBP	0.96	□□□□□ -2.26
YCS4	YLR272C	ECM4	P36156	370 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	YHR122W	P38829	231 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	VAB2	P40003	282 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	PGD1	P40356	397 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	OTU1	P43558	301 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	SUR7	P54003	302 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	MAK3	Q03503	176 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	YDR124W	Q04608	324 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	DNF3	Q12674	1656 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	NUP192	P47054	1683 aa		0.96	□□□□□ -2.26
YCS4	YLR272C	RNA14	P25298	677 aa	Known RBP	0.95	□□□□□ -2.26
YCS4	YLR272C	SEC1	P30619	724 aa	Known RBP	0.95	□□□□□ -2.26
YCS4	YLR272C	GON7	P46984	123 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	SSU72	P53538	206 aa	Predicted RBP	0.95	□□□□□ -2.26
YCS4	YLR272C	SLM3	Q12093	417 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	SAL1	D6W196	494 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.95	□□□□□ -2.26	not detected
YCS4	YLR272C	MRPS28	P21771	286 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	ASF2	P32448	525 aa	Predicted RBP	0.95	□□□□□ -2.26
YCS4	YLR272C	YOX1	P34161	385 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	RFS1	P38234	210 aa	Known RBP	0.95	□□□□□ -2.26
YCS4	YLR272C	RCK1	P38622	512 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	BMT5	P40493	336 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	BNS1	P50084	137 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	FLC3	P53121	802 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	ERP1	Q05359	219 aa	Known RBP	0.95	□□□□□ -2.26
YCS4	YLR272C	RSA1	Q08932	381 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	ATG5	Q12380	294 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	ADH3	P07246	375 aa	Known RBP	0.95	□□□□□ -2.26
YCS4	YLR272C	EHD3	P28817	500 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	PTC1	P35182	281 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	UFD1	P53044	361 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	SNO1	Q03144	224 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	MRX4	Q12467	430 aa		0.95	□□□□□ -2.26
YCS4	YLR272C	REP2	P03872	296 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	STP22	P25604	385 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	ASP1	P38986	381 aa	Predicted RBP	0.94	□□□□□ -2.26
YCS4	YLR272C	HST4	P53688	370 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	RMI1	Q02685	241 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	YMR099C	Q03161	297 aa	Known RBP	0.94	□□□□□ -2.26
YCS4	YLR272C	SDC1	Q03323	175 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	YMR027W	Q04371	470 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	YMR230W-A	Q3E7B5	62 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	CPT1	P17898	393 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	DPB2	P24482	689 aa	Predicted RBP	0.94	□□□□□ -2.26
YCS4	YLR272C	TKL2	P33315	681 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	YPT52	P36018	234 aa	Known RBP	0.94	□□□□□ -2.26
YCS4	YLR272C	YJR056C	P47115	236 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	RRP17	Q04031	235 aa	Predicted RBP	0.94	□□□□□ -2.26
YCS4	YLR272C	DIB1	Q06819	143 aa	Predicted RBP	0.94	□□□□□ -2.26
YCS4	YLR272C	BCK1	Q01389	1478 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	YJR079W	P47126	109 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	IMP4	P53941	290 aa	Known RBP	0.94	□□□□□ -2.26
YCS4	YLR272C	YPL162C	Q12042	273 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	YLR046C	Q12253	270 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	YPR014C	Q6B0W2	109 aa		0.94	□□□□□ -2.26
YCS4	YLR272C	BNI1	P41832	1953 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	COX2	P00410	251 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	SEC14	P24280	304 aa	Known RBP	0.93	□□□□□ -2.26
YCS4	YLR272C	MRPS9	P38120	278 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	GAB1	P41733	394 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	TIS11	P47977	285 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	ERV29	P53337	310 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	AIM34	Q03673	198 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	YDL114W	Q07530	308 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	ATG31	Q12421	196 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	YLR419W	Q06698	1435 aa	Known RBP	0.93	□□□□□ -2.26
YCS4	YLR272C	YAL064W-B	O13512	126 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	YOL163W	P0CF20	169 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	CKA2	P19454	339 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	CKS1	P20486	150 aa	Known RBP	0.93	□□□□□ -2.26
YCS4	YLR272C	LSM12	P38828	187 aa	Known RBP	0.93	□□□□□ -2.26
YCS4	YLR272C	IKI1	P38874	309 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	RRG9	P40156	214 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	SER33	P40510	469 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	MSA1	Q08471	629 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	DCN1	Q12395	269 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	APC1	P53886	1748 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	RFA3	P26755	122 aa	Known RBP	0.93	□□□□□ -2.26
YCS4	YLR272C	SFC1	P33303	322 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	MCH2	P36032	473 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	YIP3	P53633	176 aa		0.93	□□□□□ -2.26
YCS4	YLR272C	LYS2	P07702	1392 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 139.7 ms