RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YDC1Q02896 317 aa3.91□□□□□ -1.78
CBF5YLR175W DLT1Q04216 342 aa3.91□□□□□ -1.78
CBF5YLR175W YLR283WQ05867 314 aa3.91□□□□□ -1.78
CBF5YLR175W YPR098CQ06089 161 aa3.91□□□□□ -1.78
CBF5YLR175W YLR031WQ07978 186 aa3.91□□□□□ -1.78
CBF5YLR175W TDH2P00358 332 aaKnown RBP3.9□□□□□ -1.79
CBF5YLR175W MSI1P13712 422 aa3.9□□□□□ -1.79
CBF5YLR175W GCN3P14741 305 aa3.9□□□□□ -1.79
CBF5YLR175W CPR4P25334 318 aa3.9□□□□□ -1.79
CBF5YLR175W VMA5P31412 392 aaKnown RBP3.9□□□□□ -1.79
CBF5YLR175W GLC7P32598 312 aaKnown RBP3.9□□□□□ -1.79
CBF5YLR175W YGP1P38616 354 aaKnown RBP3.9□□□□□ -1.79
CBF5YLR175W ARO9P38840 513 aaPredicted RBP3.9□□□□□ -1.79
CBF5YLR175W PIG2P40187 538 aa3.9□□□□□ -1.79
CBF5YLR175W FLX1P40464 311 aa3.9□□□□□ -1.79
CBF5YLR175W YIL029CP40538 142 aa3.9□□□□□ -1.79
CBF5YLR175W EGT2P42835 1041 aa3.9□□□□□ -1.79
CBF5YLR175W GWT1P47026 490 aa3.9□□□□□ -1.79
CBF5YLR175W SSN8P47821 323 aa3.9□□□□□ -1.79
CBF5YLR175W SMX3P54999 86 aaPredicted RBP3.9□□□□□ -1.79
CBF5YLR175W PIN3Q06449 215 aa3.9□□□□□ -1.79
CBF5YLR175W HUT1Q12520 339 aa3.9□□□□□ -1.79
CBF5YLR175W TRA1P38811 3744 aa3.9□□□□□ -1.79
CBF5YLR175W YLR415CO13578 112 aa3.89□□□□□ -1.79
CBF5YLR175W RPL6BP05739 176 aaKnown RBP3.89□□□□□ -1.79
CBF5YLR175W RPS23AP0CX29 145 aaKnown RBP3.89□□□□□ -1.79
CBF5YLR175W RPS23BP0CX30 145 aa3.89□□□□□ -1.79
CBF5YLR175W HNM1P19807 563 aa3.89□□□□□ -1.79
CBF5YLR175W RNA14P25298 677 aaKnown RBP3.89□□□□□ -1.79
CBF5YLR175W YCP4P25349 247 aaKnown RBP3.89□□□□□ -1.79
CBF5YLR175W ATG22P25568 528 aa3.89□□□□□ -1.79
CBF5YLR175W YCR101CP25607 182 aa3.89□□□□□ -1.79
CBF5YLR175W ACH1P32316 526 aa3.89□□□□□ -1.79
CBF5YLR175W MTC7P32633 139 aa3.89□□□□□ -1.79
CBF5YLR175W FMT1P32785 401 aa3.89□□□□□ -1.79
CBF5YLR175W PPQ1P32945 549 aa3.89□□□□□ -1.79
CBF5YLR175W YKL063CP35725 167 aa3.89□□□□□ -1.79
CBF5YLR175W YBR220CP38318 560 aa3.89□□□□□ -1.79
CBF5YLR175W LNP1P38878 278 aa3.89□□□□□ -1.79
CBF5YLR175W MRPL13Q02204 264 aa3.89□□□□□ -1.79
CBF5YLR175W ASM4Q05166 528 aa3.89□□□□□ -1.79
CBF5YLR175W RAD52P06778 471 aaKnown RBP3.88□□□□□ -1.79
CBF5YLR175W ARG80P07249 177 aa3.88□□□□□ -1.79
CBF5YLR175W PUT1P09368 476 aa3.88□□□□□ -1.79
CBF5YLR175W YCR016WP25617 290 aaKnown RBP3.88□□□□□ -1.79
CBF5YLR175W TRR1P29509 319 aaKnown RBP3.88□□□□□ -1.79
CBF5YLR175W RNP1P32385 249 aa3.88□□□□□ -1.79
CBF5YLR175W YBL010CP32788 280 aa3.88□□□□□ -1.79
CBF5YLR175W VAM7P32912 316 aa3.88□□□□□ -1.79
CBF5YLR175W YOX1P34161 385 aa3.88□□□□□ -1.79
CBF5YLR175W PRS3P38689 320 aaKnown RBP3.88□□□□□ -1.79
CBF5YLR175W YER079WP40052 210 aaKnown RBP3.88□□□□□ -1.79
CBF5YLR175W CCS1P40202 249 aaKnown RBP3.88□□□□□ -1.79
CBF5YLR175W PRM5P40476 318 aa3.88□□□□□ -1.79
CBF5YLR175W MRX5P47007 382 aa3.88□□□□□ -1.79
CBF5YLR175W UBC13P52490 153 aa3.88□□□□□ -1.79
CBF5YLR175W UFD1P53044 361 aa3.88□□□□□ -1.79
CBF5YLR175W RSM27P53305 110 aa3.88□□□□□ -1.79
CBF5YLR175W YNL092WP53934 400 aa3.88□□□□□ -1.79
CBF5YLR175W YDR248CQ03786 193 aa3.88□□□□□ -1.79
CBF5YLR175W SYM1Q06563 197 aa3.88□□□□□ -1.79
CBF5YLR175W GRC3Q07845 632 aa3.88□□□□□ -1.79
CBF5YLR175W GAT3Q07928 141 aa3.88□□□□□ -1.79
CBF5YLR175W YOR186WQ08560 144 aa3.88□□□□□ -1.79
CBF5YLR175W TRM13Q12383 476 aa3.88□□□□□ -1.79
CBF5YLR175W RDI1Q12434 202 aa3.88□□□□□ -1.79
CBF5YLR175W ERP4Q12450 207 aa3.88□□□□□ -1.79
CBF5YLR175W PET20Q99373 253 aa3.88□□□□□ -1.79
CBF5YLR175W RPL25P04456 142 aaKnown RBP3.87□□□□□ -1.79
CBF5YLR175W RPL43AP0CX25 92 aaKnown RBP3.87□□□□□ -1.79
CBF5YLR175W RPL43BP0CX26 92 aa3.87□□□□□ -1.79
CBF5YLR175W STF2P16965 84 aa3.87□□□□□ -1.79
CBF5YLR175W ERG3P32353 365 aa3.87□□□□□ -1.79
CBF5YLR175W NAT2P37293 288 aa3.87□□□□□ -1.79
CBF5YLR175W PRS2P38620 318 aaKnown RBP3.87□□□□□ -1.79
CBF5YLR175W DIE2P50076 525 aa3.87□□□□□ -1.79
CBF5YLR175W TAF4P50105 388 aa3.87□□□□□ -1.79
CBF5YLR175W CRZ1P53968 678 aa3.87□□□□□ -1.79
CBF5YLR175W YPL077CQ02831 240 aa3.87□□□□□ -1.79
CBF5YLR175W YMR254CQ04838 102 aa3.87□□□□□ -1.79
CBF5YLR175W NCE102Q12207 173 aaRIP-Chip data3.87□□□□□ -1.79not detected
CBF5YLR175W RNH203Q12338 110 aa3.87□□□□□ -1.79
CBF5YLR175W YML003WP0CF16 290 aa3.86□□□□□ -1.79
CBF5YLR175W SAR1P20606 190 aaKnown RBP3.86□□□□□ -1.79
CBF5YLR175W MIR1P23641 311 aaKnown RBP3.86□□□□□ -1.79
CBF5YLR175W MRP17P28778 131 aa3.86□□□□□ -1.79
CBF5YLR175W AGA2P32781 87 aa3.86□□□□□ -1.79
CBF5YLR175W MTR2P34232 184 aaKnown RBP3.86□□□□□ -1.79
CBF5YLR175W YPC1P38298 316 aa3.86□□□□□ -1.79
CBF5YLR175W YNL046WP53956 172 aa3.86□□□□□ -1.79
CBF5YLR175W ARG5,6Q01217 863 aa3.86□□□□□ -1.79
CBF5YLR175W SKO1Q02100 647 aa3.86□□□□□ -1.79
CBF5YLR175W YPL067CQ02754 198 aa3.86□□□□□ -1.79
CBF5YLR175W YMR279CQ03263 540 aa3.86□□□□□ -1.79
CBF5YLR175W YML018CQ03730 393 aa3.86□□□□□ -1.79
CBF5YLR175W VBA1Q04301 562 aa3.86□□□□□ -1.79
CBF5YLR175W UPS1Q05776 175 aa3.86□□□□□ -1.79
CBF5YLR175W YLR224WQ05947 369 aa3.86□□□□□ -1.79
CBF5YLR175W PML1Q07930 204 aaPredicted RBP3.86□□□□□ -1.79
CBF5YLR175W MPD1Q12404 318 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms