RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W COX1P00401 534 aa6.48□□□□□ -1.37
SNF7YLR025W MES1P00958 751 aaKnown RBP6.48□□□□□ -1.37
SNF7YLR025W YFR010W-AP0C5N0 62 aa6.48□□□□□ -1.37
SNF7YLR025W SCO1P23833 295 aa6.48□□□□□ -1.37
SNF7YLR025W VAM7P32912 316 aa6.48□□□□□ -1.37
SNF7YLR025W IRC24P40580 263 aa6.48□□□□□ -1.37
SNF7YLR025W YGL117WP53133 265 aa6.48□□□□□ -1.37
SNF7YLR025W INN1P53901 409 aa6.48□□□□□ -1.37
SNF7YLR025W MEH1Q02205 184 aa6.48□□□□□ -1.37
SNF7YLR025W NUP53Q03790 475 aa6.48□□□□□ -1.37
SNF7YLR025W SYM1Q06563 197 aa6.48□□□□□ -1.37
SNF7YLR025W MRX9Q07349 420 aaKnown RBP6.48□□□□□ -1.37
SNF7YLR025W AKR2Q12013 749 aa6.48□□□□□ -1.37
SNF7YLR025W YOR032W-AQ8TGS1 66 aa6.48□□□□□ -1.37
SNF7YLR025W ISN1Q99312 450 aa6.48□□□□□ -1.37
SNF7YLR025W BRR2P32639 2163 aaKnown RBP6.47□□□□□ -1.37
SNF7YLR025W YPT1P01123 206 aaKnown RBP6.47□□□□□ -1.37
SNF7YLR025W SED4P25365 1065 aa6.47□□□□□ -1.37
SNF7YLR025W CPR3P25719 182 aa6.47□□□□□ -1.37
SNF7YLR025W OM14P38325 134 aa6.47□□□□□ -1.37
SNF7YLR025W SHG1P38337 142 aa6.47□□□□□ -1.37
SNF7YLR025W CAF16P43569 289 aa6.47□□□□□ -1.37
SNF7YLR025W DUG1P43616 481 aaKnown RBP6.47□□□□□ -1.37
SNF7YLR025W GPI15P53961 229 aa6.47□□□□□ -1.37
SNF7YLR025W GIS1Q03833 894 aa6.47□□□□□ -1.37
SNF7YLR025W LRS4Q04087 347 aaKnown RBP6.47□□□□□ -1.37
SNF7YLR025W USB1Q12208 290 aaKnown RBP6.47□□□□□ -1.37
SNF7YLR025W FRE7Q12333 620 aa6.47□□□□□ -1.37
SNF7YLR025W ISA2Q12425 185 aa6.47□□□□□ -1.37
SNF7YLR025W PCC1Q3E833 88 aa6.47□□□□□ -1.37
SNF7YLR025W BLM10P43583 2143 aa6.47□□□□□ -1.37
SNF7YLR025W TDH3P00359 332 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
SNF7YLR025W RPL30P14120 105 aaKnown RBP6.46□□□□□ -1.38
SNF7YLR025W CKA1P15790 372 aa6.46□□□□□ -1.38
SNF7YLR025W CNB1P25296 175 aa6.46□□□□□ -1.38
SNF7YLR025W MSK1P32048 576 aa6.46□□□□□ -1.38
SNF7YLR025W EMP24P32803 203 aaKnown RBP6.46□□□□□ -1.38
SNF7YLR025W SOF1P33750 489 aaKnown RBP6.46□□□□□ -1.38
SNF7YLR025W FLO10P36170 1169 aa6.46□□□□□ -1.38
SNF7YLR025W YBR096WP38256 230 aa6.46□□□□□ -1.38
SNF7YLR025W LNP1P38878 278 aa6.46□□□□□ -1.38
SNF7YLR025W MOB2P43563 287 aa6.46□□□□□ -1.38
SNF7YLR025W CTK2P46962 323 aa6.46□□□□□ -1.38
SNF7YLR025W MOG1P47123 218 aa6.46□□□□□ -1.38
SNF7YLR025W PGU1P47180 361 aa6.46□□□□□ -1.38
SNF7YLR025W SSN8P47821 323 aa6.46□□□□□ -1.38
SNF7YLR025W YDR387CQ04162 555 aa6.46□□□□□ -1.38
SNF7YLR025W CAC2Q04199 468 aa6.46□□□□□ -1.38
SNF7YLR025W YCT1Q12235 531 aa6.46□□□□□ -1.38
SNF7YLR025W COX5BP00425 151 aa6.45□□□□□ -1.38
SNF7YLR025W QCR2P07257 368 aa6.45□□□□□ -1.38
SNF7YLR025W SPS4P09937 338 aa6.45□□□□□ -1.38
SNF7YLR025W TRR1P29509 319 aaKnown RBP6.45□□□□□ -1.38
SNF7YLR025W UTH1P36135 365 aa6.45□□□□□ -1.38
SNF7YLR025W RIB5P38145 238 aa6.45□□□□□ -1.38
SNF7YLR025W AGX1P43567 385 aa6.45□□□□□ -1.38
SNF7YLR025W NRM1P53718 249 aa6.45□□□□□ -1.38
SNF7YLR025W CAF40P53829 373 aa6.45□□□□□ -1.38
SNF7YLR025W ODC1Q03028 310 aa6.45□□□□□ -1.38
SNF7YLR025W ERP1Q05359 219 aaKnown RBP6.45□□□□□ -1.38
SNF7YLR025W GRC3Q07845 632 aa6.45□□□□□ -1.38
SNF7YLR025W YBR182C-AQ8TGU6 64 aa6.45□□□□□ -1.38
SNF7YLR025W RPL25P04456 142 aaKnown RBP6.44□□□□□ -1.38
SNF7YLR025W GDH1P07262 454 aaKnown RBP6.44□□□□□ -1.38
SNF7YLR025W RPS16AP0CX51 143 aaKnown RBP6.44□□□□□ -1.38
SNF7YLR025W RPS16BP0CX52 143 aaKnown RBP6.44□□□□□ -1.38
SNF7YLR025W DAL82P21705 255 aa6.44□□□□□ -1.38
SNF7YLR025W ECM31P38122 312 aa6.44□□□□□ -1.38
SNF7YLR025W FIG1P38224 298 aa6.44□□□□□ -1.38
SNF7YLR025W YND1P40009 630 aa6.44□□□□□ -1.38
SNF7YLR025W PGD1P40356 397 aa6.44□□□□□ -1.38
SNF7YLR025W SLM1P40485 686 aa6.44□□□□□ -1.38
SNF7YLR025W ADO1P47143 340 aaKnown RBP6.44□□□□□ -1.38
SNF7YLR025W SLX9P53251 210 aaPredicted RBP6.44□□□□□ -1.38
SNF7YLR025W FMP41P53889 259 aaKnown RBP6.44□□□□□ -1.38
SNF7YLR025W YCL001W-AP87012 153 aa6.44□□□□□ -1.38
SNF7YLR025W VPS28Q02767 242 aa6.44□□□□□ -1.38
SNF7YLR025W MDM30Q05930 598 aa6.44□□□□□ -1.38
SNF7YLR025W DIF1O13577 133 aa6.43□□□□□ -1.38
SNF7YLR025W YLL053CP0CD98 152 aa6.43□□□□□ -1.38
SNF7YLR025W MDH2P22133 377 aa6.43□□□□□ -1.38
SNF7YLR025W PCL1P24867 279 aa6.43□□□□□ -1.38
SNF7YLR025W YCR101CP25607 182 aa6.43□□□□□ -1.38
SNF7YLR025W YEA6P39953 335 aa6.43□□□□□ -1.38
SNF7YLR025W ATF1P40353 525 aa6.43□□□□□ -1.38
SNF7YLR025W POG1P40473 351 aa6.43□□□□□ -1.38
SNF7YLR025W GPP1P41277 250 aaKnown RBP6.43□□□□□ -1.38
SNF7YLR025W ECO1P43605 281 aa6.43□□□□□ -1.38
SNF7YLR025W OCA1P50946 238 aaPredicted RBP6.43□□□□□ -1.38
SNF7YLR025W ATG21Q02887 496 aa6.43□□□□□ -1.38
SNF7YLR025W MRP51Q02950 344 aa6.43□□□□□ -1.38
SNF7YLR025W YDR415CQ04033 374 aaPredicted RBP6.43□□□□□ -1.38
SNF7YLR025W THI74Q04083 370 aa6.43□□□□□ -1.38
SNF7YLR025W VMA9Q3E7B6 73 aa6.43□□□□□ -1.38
SNF7YLR025W GAL1P04385 528 aa6.42□□□□□ -1.38
SNF7YLR025W YML003WP0CF16 290 aa6.42□□□□□ -1.38
SNF7YLR025W GLC7P32598 312 aaKnown RBP6.42□□□□□ -1.38
SNF7YLR025W ERV15P38312 142 aa6.42□□□□□ -1.38
SNF7YLR025W QRI1P43123 477 aaKnown RBP6.42□□□□□ -1.38
SNF7YLR025W YJR056CP47115 236 aa6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 69.2 ms