RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C ADK1P07170 222 aaKnown RBP5.15□□□□□ -1.58
SSK1YLR006C CKS1P20486 150 aaKnown RBP5.15□□□□□ -1.58
SSK1YLR006C YKL187CP34231 750 aa5.15□□□□□ -1.58
SSK1YLR006C MRPL16P38064 232 aa5.15□□□□□ -1.58
SSK1YLR006C TRM7P38238 310 aaKnown RBP5.15□□□□□ -1.58
SSK1YLR006C GEP4P38812 185 aa5.15□□□□□ -1.58
SSK1YLR006C ARO9P38840 513 aaPredicted RBP5.15□□□□□ -1.58
SSK1YLR006C GLC8P41818 229 aa5.15□□□□□ -1.58
SSK1YLR006C YCH1P42937 148 aa5.15□□□□□ -1.58
SSK1YLR006C PEX30Q06169 523 aa5.15□□□□□ -1.58
SSK1YLR006C RPP1AP05318 106 aaPredicted RBP5.15□□□□□ -1.59
SSK1YLR006C CDC7P06243 507 aa5.15□□□□□ -1.59
SSK1YLR006C RFA1P22336 621 aaKnown RBP5.15□□□□□ -1.59
SSK1YLR006C NRP1P32770 719 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
SSK1YLR006C RPL10P41805 221 aaKnown RBP5.15□□□□□ -1.59
SSK1YLR006C UBC12P52491 188 aa5.15□□□□□ -1.59
SSK1YLR006C POP6P53218 158 aa5.15□□□□□ -1.59
SSK1YLR006C SIZ1Q04195 904 aa5.15□□□□□ -1.59
SSK1YLR006C CAC2Q04199 468 aa5.15□□□□□ -1.59
SSK1YLR006C FDH1Q08911 376 aa5.15□□□□□ -1.59
SSK1YLR006C PFA4Q12006 378 aa5.15□□□□□ -1.59
SSK1YLR006C VPS68Q12016 184 aa5.15□□□□□ -1.59
SSK1YLR006C YLR111WQ12528 110 aa5.15□□□□□ -1.59
SSK1YLR006C RPL25P04456 142 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C SNF5P18480 905 aa5.14□□□□□ -1.59
SSK1YLR006C RPB5P20434 215 aa5.14□□□□□ -1.59
SSK1YLR006C YEF1P32622 495 aa5.14□□□□□ -1.59
SSK1YLR006C YBR220CP38318 560 aa5.14□□□□□ -1.59
SSK1YLR006C MTC4P38335 694 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C SHG1P38337 142 aa5.14□□□□□ -1.59
SSK1YLR006C POP1P41812 875 aa5.14□□□□□ -1.59
SSK1YLR006C AIM24P47127 394 aa5.14□□□□□ -1.59
SSK1YLR006C SNO2P53823 222 aa5.14□□□□□ -1.59
SSK1YLR006C RHO3Q00245 231 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C GAS2Q06135 555 aa5.14□□□□□ -1.59
SSK1YLR006C NMA1Q06178 401 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C RNH203Q12338 110 aa5.14□□□□□ -1.59
SSK1YLR006C CDC28P00546 298 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C SPT15P13393 240 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C CNB1P25296 175 aa5.14□□□□□ -1.59
SSK1YLR006C PAU2P32612 120 aa5.14□□□□□ -1.59
SSK1YLR006C PTH1P38876 190 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C YMR144WP40214 342 aaKnown RBP5.14□□□□□ -1.59
SSK1YLR006C YGL101WP53144 215 aa5.14□□□□□ -1.59
SSK1YLR006C ALG13P53178 202 aa5.14□□□□□ -1.59
SSK1YLR006C COX18P53239 316 aa5.14□□□□□ -1.59
SSK1YLR006C SAY1P53324 424 aa5.14□□□□□ -1.59
SSK1YLR006C ABF2Q02486 183 aa5.14□□□□□ -1.59
SSK1YLR006C SNT309Q06091 175 aaPredicted RBP5.14□□□□□ -1.59
SSK1YLR006C ARR3Q06598 404 aa5.14□□□□□ -1.59
SSK1YLR006C YKL033W-AQ86ZR7 236 aa5.14□□□□□ -1.59
SSK1YLR006C YLL053CP0CD98 152 aa5.13□□□□□ -1.59
SSK1YLR006C YMC1P32331 307 aa5.13□□□□□ -1.59
SSK1YLR006C SRY1P36007 326 aa5.13□□□□□ -1.59
SSK1YLR006C OMA1P36163 345 aa5.13□□□□□ -1.59
SSK1YLR006C BAT1P38891 393 aaKnown RBP5.13□□□□□ -1.59
SSK1YLR006C LYS5P50113 272 aa5.13□□□□□ -1.59
SSK1YLR006C MRPL22P53881 309 aa5.13□□□□□ -1.59
SSK1YLR006C YPL077CQ02831 240 aa5.13□□□□□ -1.59
SSK1YLR006C YDR391CQ04170 232 aa5.13□□□□□ -1.59
SSK1YLR006C PAL1Q05518 499 aaKnown RBP5.13□□□□□ -1.59
SSK1YLR006C MRP1P10662 321 aaKnown RBP5.12□□□□□ -1.59
SSK1YLR006C CTA1P15202 515 aa5.12□□□□□ -1.59
SSK1YLR006C YCR023CP25351 611 aa5.12□□□□□ -1.59
SSK1YLR006C SFC1P33303 322 aa5.12□□□□□ -1.59
SSK1YLR006C YER076CP40049 302 aa5.12□□□□□ -1.59
SSK1YLR006C GPI14P47088 403 aaKnown RBP5.12□□□□□ -1.59
SSK1YLR006C FMP48P53233 369 aa5.12□□□□□ -1.59
SSK1YLR006C INP1Q03694 420 aa5.12□□□□□ -1.59
SSK1YLR006C TY1A-DR2Q03964 440 aaKnown RBP5.12□□□□□ -1.59
SSK1YLR006C TSA2Q04120 196 aa5.12□□□□□ -1.59
SSK1YLR006C TY1A-MR1Q04215 440 aa5.12□□□□□ -1.59
SSK1YLR006C UTP15Q04305 513 aaKnown RBP5.12□□□□□ -1.59
SSK1YLR006C TY1A-BLQ12266 440 aa5.12□□□□□ -1.59
SSK1YLR006C FOL3Q12676 427 aaPredicted RBP5.12□□□□□ -1.59
SSK1YLR006C MSB2P32334 1306 aa5.12□□□□□ -1.59
SSK1YLR006C ERG4P25340 473 aa5.12□□□□□ -1.59
SSK1YLR006C ATS1P31386 333 aa5.12□□□□□ -1.59
SSK1YLR006C MSK1P32048 576 aa5.12□□□□□ -1.59
SSK1YLR006C SPS18P32572 300 aa5.12□□□□□ -1.59
SSK1YLR006C PDC2P32896 925 aa5.12□□□□□ -1.59
SSK1YLR006C VAM7P32912 316 aa5.12□□□□□ -1.59
SSK1YLR006C NTF2P33331 125 aaKnown RBP5.12□□□□□ -1.59
SSK1YLR006C SMB1P40018 196 aaKnown RBP5.12□□□□□ -1.59
SSK1YLR006C COX15P40086 486 aa5.12□□□□□ -1.59
SSK1YLR006C GAT2P40209 560 aa5.12□□□□□ -1.59
SSK1YLR006C SWM2P40342 146 aa5.12□□□□□ -1.59
SSK1YLR006C PGD1P40356 397 aa5.12□□□□□ -1.59
SSK1YLR006C CAF40P53829 373 aa5.12□□□□□ -1.59
SSK1YLR006C ASI3P53983 676 aa5.12□□□□□ -1.59
SSK1YLR006C YDR249CQ03787 373 aa5.12□□□□□ -1.59
SSK1YLR006C KEI1Q06346 221 aa5.12□□□□□ -1.59
SSK1YLR006C TAZ1Q06510 381 aa5.12□□□□□ -1.59
SSK1YLR006C YDL177CQ12257 170 aa5.12□□□□□ -1.59
SSK1YLR006C PSF1Q12488 208 aa5.12□□□□□ -1.59
SSK1YLR006C YHR213W-AQ8TGT4 77 aa5.12□□□□□ -1.59
SSK1YLR006C MRP2P10663 115 aaPredicted RBP5.11□□□□□ -1.59
SSK1YLR006C MXR2P25566 168 aa5.11□□□□□ -1.59
SSK1YLR006C MRP17P28778 131 aa5.11□□□□□ -1.59
SSK1YLR006C RTG1P32607 177 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms