RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W BXI1P48558 297 aa3.57□□□□□ -1.84
SOF1YLL011W NRK1P53915 240 aa3.57□□□□□ -1.84
SOF1YLL011W CRZ1P53968 678 aa3.57□□□□□ -1.84
SOF1YLL011W PEX12Q04370 399 aa3.57□□□□□ -1.84
SOF1YLL011W GRX8Q05926 109 aa3.57□□□□□ -1.84
SOF1YLL011W DXO1Q06349 442 aa3.57□□□□□ -1.84
SOF1YLL011W RPL21BQ12672 160 aaKnown RBP3.57□□□□□ -1.84
SOF1YLL011W YER078W-AQ3E7A2 54 aa3.57□□□□□ -1.84
SOF1YLL011W OAC1P32332 324 aa3.56□□□□□ -1.84
SOF1YLL011W DBP7P36120 742 aaKnown RBP3.56□□□□□ -1.84
SOF1YLL011W MRPL28P36527 147 aa3.56□□□□□ -1.84
SOF1YLL011W MRPL49P40858 161 aaPredicted RBP3.56□□□□□ -1.84
SOF1YLL011W YGR018CP53211 109 aa3.56□□□□□ -1.84
SOF1YLL011W YMR279CQ03263 540 aa3.56□□□□□ -1.84
SOF1YLL011W INM2Q05533 292 aa3.56□□□□□ -1.84
SOF1YLL011W PBA1Q05778 276 aa3.56□□□□□ -1.84
SOF1YLL011W YDR018CQ12185 396 aa3.56□□□□□ -1.84
SOF1YLL011W HRT3Q12347 344 aa3.56□□□□□ -1.84
SOF1YLL011W RAX2Q12465 1220 aa3.56□□□□□ -1.84
SOF1YLL011W YPL229WQ99395 206 aa3.56□□□□□ -1.84
SOF1YLL011W MET2P08465 486 aa3.55□□□□□ -1.84
SOF1YLL011W GCN3P14741 305 aa3.55□□□□□ -1.84
SOF1YLL011W CAT2P32796 670 aaKnown RBP3.55□□□□□ -1.84
SOF1YLL011W POP8P38208 133 aa3.55□□□□□ -1.84
SOF1YLL011W TIM17P39515 158 aa3.55□□□□□ -1.84
SOF1YLL011W OXA1P39952 402 aa3.55□□□□□ -1.84
SOF1YLL011W YGL235WP53071 178 aa3.55□□□□□ -1.84
SOF1YLL011W RNH201P53942 307 aa3.55□□□□□ -1.84
SOF1YLL011W NDD1Q08887 554 aa3.55□□□□□ -1.84
SOF1YLL011W AGC1Q12482 902 aa3.55□□□□□ -1.84
SOF1YLL011W SOL2P37262 315 aa3.54□□□□□ -1.84
SOF1YLL011W ECM33P38248 429 aaKnown RBP3.54□□□□□ -1.84
SOF1YLL011W BAT1P38891 393 aaKnown RBP3.54□□□□□ -1.84
SOF1YLL011W LSM1P47017 172 aaKnown RBP3.54□□□□□ -1.84
SOF1YLL011W MIG2P53035 382 aa3.54□□□□□ -1.84
SOF1YLL011W MRH4P53166 561 aa3.54□□□□□ -1.84
SOF1YLL011W FMP48P53233 369 aa3.54□□□□□ -1.84
SOF1YLL011W YNL046WP53956 172 aa3.54□□□□□ -1.84
SOF1YLL011W YDR115WQ04598 105 aa3.54□□□□□ -1.84
SOF1YLL011W MSA1Q08471 629 aa3.54□□□□□ -1.84
SOF1YLL011W YOR186WQ08560 144 aa3.54□□□□□ -1.84
SOF1YLL011W SRL1Q08673 210 aa3.54□□□□□ -1.84
SOF1YLL011W PET20Q99373 253 aa3.54□□□□□ -1.84
SOF1YLL011W YFL064CP43540 174 aa3.54□□□□□ -1.84
SOF1YLL011W YGL034CP53186 121 aa3.54□□□□□ -1.84
SOF1YLL011W ELP3Q02908 557 aaKnown RBP3.54□□□□□ -1.84
SOF1YLL011W MRX11Q03079 207 aa3.54□□□□□ -1.84
SOF1YLL011W GOT1Q03554 138 aa3.54□□□□□ -1.84
SOF1YLL011W YDR248CQ03786 193 aa3.54□□□□□ -1.84
SOF1YLL011W HRI1Q05905 244 aaKnown RBP3.54□□□□□ -1.84
SOF1YLL011W ERV2Q12284 196 aa3.54□□□□□ -1.84
SOF1YLL011W ERD2P18414 219 aa3.53□□□□□ -1.84
SOF1YLL011W TAH1P25638 111 aaPredicted RBP3.53□□□□□ -1.84
SOF1YLL011W SRP102P36057 244 aaPredicted RBP3.53□□□□□ -1.84
SOF1YLL011W DER1P38307 211 aa3.53□□□□□ -1.84
SOF1YLL011W YER076CP40049 302 aa3.53□□□□□ -1.84
SOF1YLL011W PEX17P40155 199 aa3.53□□□□□ -1.84
SOF1YLL011W AAH1P53909 347 aa3.53□□□□□ -1.84
SOF1YLL011W RMI1Q02685 241 aa3.53□□□□□ -1.84
SOF1YLL011W RPL21AQ02753 160 aaKnown RBP3.53□□□□□ -1.84
SOF1YLL011W LIP2Q06005 328 aa3.53□□□□□ -1.84
SOF1YLL011W IRC25Q07951 179 aa3.53□□□□□ -1.84
SOF1YLL011W SYC1Q08553 188 aaPredicted RBP3.53□□□□□ -1.84
SOF1YLL011W YAL063C-AQ3E791 96 aa3.53□□□□□ -1.84
SOF1YLL011W IGO2Q9P305 131 aa3.53□□□□□ -1.84
SOF1YLL011W CUP2P15315 225 aa3.52□□□□□ -1.85
SOF1YLL011W AAT2P23542 418 aaKnown RBP3.52□□□□□ -1.85
SOF1YLL011W YBL059WP34224 193 aa3.52□□□□□ -1.85
SOF1YLL011W YKR041WP36134 250 aa3.52□□□□□ -1.85
SOF1YLL011W EFM1P38732 585 aa3.52□□□□□ -1.85
SOF1YLL011W SBH2P52871 88 aa3.52□□□□□ -1.85
SOF1YLL011W JAC1P53193 184 aa3.52□□□□□ -1.85
SOF1YLL011W INP1Q03694 420 aa3.52□□□□□ -1.85
SOF1YLL011W YMR244WQ04018 355 aa3.52□□□□□ -1.85
SOF1YLL011W ARO80Q04052 950 aa3.52□□□□□ -1.85
SOF1YLL011W YDR124WQ04608 324 aa3.52□□□□□ -1.85
SOF1YLL011W SPC2Q04969 178 aa3.52□□□□□ -1.85
SOF1YLL011W YLR036CQ07986 203 aa3.52□□□□□ -1.85
SOF1YLL011W FDH1Q08911 376 aa3.52□□□□□ -1.85
SOF1YLL011W YOR283WQ12040 230 aaKnown RBP3.52□□□□□ -1.85
SOF1YLL011W MRS1P07266 363 aa3.51□□□□□ -1.85
SOF1YLL011W TRX3P25372 127 aa3.51□□□□□ -1.85
SOF1YLL011W APS1P35181 156 aa3.51□□□□□ -1.85
SOF1YLL011W PRY2P36110 329 aa3.51□□□□□ -1.85
SOF1YLL011W PHO89P38361 574 aa3.51□□□□□ -1.85
SOF1YLL011W ECM14P38836 430 aa3.51□□□□□ -1.85
SOF1YLL011W ICE2P40499 491 aa3.51□□□□□ -1.85
SOF1YLL011W PET191Q02772 108 aa3.51□□□□□ -1.85
SOF1YLL011W YDC1Q02896 317 aa3.51□□□□□ -1.85
SOF1YLL011W YMR315WQ04869 349 aaKnown RBP3.51□□□□□ -1.85
SOF1YLL011W YOL024WQ08172 172 aa3.51□□□□□ -1.85
SOF1YLL011W YBL008W-AQ3E821 79 aa3.51□□□□□ -1.85
SOF1YLL011W YDR034W-BQ6Q5X2 51 aa3.51□□□□□ -1.85
SOF1YLL011W RPS28BP0C0X0 67 aaKnown RBP3.5□□□□□ -1.85
SOF1YLL011W DPM1P14020 267 aaKnown RBP3.5□□□□□ -1.85
SOF1YLL011W ISY1P21374 235 aaPredicted RBP3.5□□□□□ -1.85
SOF1YLL011W RFS1P38234 210 aaKnown RBP3.5□□□□□ -1.85
SOF1YLL011W GGC1P38988 300 aa3.5□□□□□ -1.85
SOF1YLL011W MIG3P39943 394 aa3.5□□□□□ -1.85
SOF1YLL011W SOK1P40317 901 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms