RNA–Protein interactions for RNA: YKR105C

VBA5, Transcript of Plasma membrane protein of the Major Facilitator Superfamily (MFS), yeast

Gene VBA5, Length 1,749 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA5	YKR105C	CPR2	P23285	205 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	FUN19	P28003	413 aa	Predicted RBP	6.11	□□□□□ -1.43
VBA5	YKR105C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
VBA5	YKR105C	DAD2	P36162	133 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	TAT1	P38085	619 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	THI2	P38141	450 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	PAU24	P38155	120 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	YHK8	P38776	514 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	SMB1	P40018	196 aa	Known RBP	6.11	□□□□□ -1.43
VBA5	YKR105C	PUG1	P40100	303 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	GLC8	P41818	229 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	GPI14	P47088	403 aa	Known RBP	6.11	□□□□□ -1.43
VBA5	YKR105C	LYS5	P50113	272 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	POP6	P53218	158 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	YGR126W	P53274	230 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	SAY1	P53324	424 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	APM1	Q00776	475 aa	Predicted RBP	6.11	□□□□□ -1.43
VBA5	YKR105C	DIG2	Q03373	323 aa	Known RBP	6.11	□□□□□ -1.43
VBA5	YKR105C	SUA7	P29055	345 aa	Predicted RBP	6.11	□□□□□ -1.43
VBA5	YKR105C	YKR073C	P36153	106 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	DER1	P38307	211 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	GPI16	P38875	610 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	SBH2	P52871	88 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	MIX14	Q04341	121 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	YPR109W	Q06104	294 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	RRG7	Q08774	242 aa	Predicted RBP	6.11	□□□□□ -1.43
VBA5	YKR105C	PCC1	Q3E833	88 aa		6.11	□□□□□ -1.43
VBA5	YKR105C	RPL40A	P0CH08	128 aa	Known RBP	6.1	□□□□□ -1.43
VBA5	YKR105C	RPL40B	P0CH09	128 aa	Known RBP	6.1	□□□□□ -1.43
VBA5	YKR105C	EHD3	P28817	500 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	NUD1	P32336	851 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	PHD1	P36093	366 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	MBA1	P38300	278 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	IKI1	P38874	309 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	SHO1	P40073	367 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	PGD1	P40356	397 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	REE1	P40893	198 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	PAM16	P42949	149 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	ECM27	P47144	725 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	PHB2	P50085	310 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	JAC1	P53193	184 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	SNO1	Q03144	224 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	YMR252C	Q04814	134 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	MRPL51	Q06090	140 aa	Predicted RBP	6.1	□□□□□ -1.43
VBA5	YKR105C	ATG39	Q06159	398 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	RDL2	Q08742	149 aa	Known RBP	6.1	□□□□□ -1.43
VBA5	YKR105C	YPL199C	Q08954	240 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	YRA1	Q12159	226 aa	Known RBP	6.1	□□□□□ -1.43
VBA5	YKR105C	TIR4	Q12218	487 aa	Predicted RBP	6.1	□□□□□ -1.43
VBA5	YKR105C	YOR343C	Q12484	108 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	YOR032W-A	Q8TGS1	66 aa		6.1	□□□□□ -1.43
VBA5	YKR105C	FAS1	P07149	2051 aa	Known RBP	6.09	□□□□□ -1.43
VBA5	YKR105C	YAL064W-B	O13512	126 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	MSW1	P04803	379 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	MAG1	P22134	296 aa	Known RBP	6.09	□□□□□ -1.43
VBA5	YKR105C	ERG8	P24521	451 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	HOM6	P31116	359 aa	Known RBP	6.09	□□□□□ -1.43
VBA5	YKR105C	SRB6	P32570	121 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	ZRT3	P34240	503 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	TMA19	P35691	167 aa	Known RBP	6.09	□□□□□ -1.43
VBA5	YKR105C	YPC1	P38298	316 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	OM14	P38325	134 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	QDR1	P40475	563 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	SEC24	P40482	926 aa	Known RBP	6.09	□□□□□ -1.43
VBA5	YKR105C	POP1	P41812	875 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	ATG21	Q02887	496 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	YPL039W	Q03080	316 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	MRX8	Q05473	314 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	RKI1	Q12189	258 aa		6.09	□□□□□ -1.43
VBA5	YKR105C	SPS2	P08459	502 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YCP4	P25349	247 aa	Known RBP	6.08	□□□□□ -1.44
VBA5	YKR105C	LDB16	P25587	256 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YCR102C	P25608	368 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	PGU1	P47180	361 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YGL185C	P53100	379 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	BOR1	P53838	576 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YDR366C	P87287	132 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	RSM10	Q03201	203 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YLR224W	Q05947	369 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	FSF1	Q12029	327 aa	Known RBP	6.08	□□□□□ -1.44
VBA5	YKR105C	POM33	Q12164	279 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	RDL1	Q12305	139 aa	Known RBP	6.08	□□□□□ -1.44
VBA5	YKR105C	FRE7	Q12333	620 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	SWM1	Q12379	170 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YIR021W-A	Q3E739	70 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	RPS13	P05756	151 aa	Known RBP	6.08	□□□□□ -1.44
VBA5	YKR105C	STE18	P18852	110 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	MSN1	P22148	382 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YKL070W	P36087	169 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YBR197C	P38306	217 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	COX15	P40086	486 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	POG1	P40473	351 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	ECO1	P43605	281 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	IKS1	P47042	667 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	YJR012C	P47087	207 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	SKO1	Q02100	647 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	SDC1	Q03323	175 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	TPO3	Q06451	622 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	TMS1	Q12116	473 aa		6.08	□□□□□ -1.44
VBA5	YKR105C	RRI1	Q12468	440 aa		6.08	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms