RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C YPT52P36018 234 aaKnown RBP1.83□□□□□ -2.12
YPT52YKR014C YHL026CP38740 315 aa1.83□□□□□ -2.12
YPT52YKR014C YAR068WP39564 161 aa1.83□□□□□ -2.12
YPT52YKR014C TIF34P40217 347 aaKnown RBP1.83□□□□□ -2.12
YPT52YKR014C FIS1P40515 155 aa1.83□□□□□ -2.12
YPT52YKR014C ARC15P40518 154 aaRIP-Chip data1.83□□□□□ -2.12not detected
YPT52YKR014C YJL016WP47072 561 aa1.83□□□□□ -2.12
YPT52YKR014C MGA1P53050 456 aa1.83□□□□□ -2.12
YPT52YKR014C COS6P53344 381 aa1.83□□□□□ -2.12
YPT52YKR014C YMR226CQ05016 267 aaKnown RBP1.83□□□□□ -2.12
YPT52YKR014C SSQ1Q05931 657 aaPredicted RBP1.83□□□□□ -2.12
YPT52YKR014C EMC6Q12431 108 aa1.83□□□□□ -2.12
YPT52YKR014C YOR020W-AQ3E824 90 aa1.83□□□□□ -2.12
YPT52YKR014C YDR157WA0A023PZE8 133 aa1.82□□□□□ -2.12
YPT52YKR014C ADH3P07246 375 aaKnown RBP1.82□□□□□ -2.12
YPT52YKR014C SRY1P36007 326 aa1.82□□□□□ -2.12
YPT52YKR014C YHR125WP38831 101 aa1.82□□□□□ -2.12
YPT52YKR014C RFC4P40339 323 aaKnown RBP1.82□□□□□ -2.12
YPT52YKR014C MRPL49P40858 161 aaPredicted RBP1.82□□□□□ -2.12
YPT52YKR014C YJR056CP47115 236 aa1.82□□□□□ -2.12
YPT52YKR014C DAN1P47178 298 aa1.82□□□□□ -2.12
YPT52YKR014C ERV29P53337 310 aa1.82□□□□□ -2.12
YPT52YKR014C YML108WQ03759 105 aa1.82□□□□□ -2.12
YPT52YKR014C YML096WQ04489 525 aa1.82□□□□□ -2.12
YPT52YKR014C NIP7Q08962 181 aaKnown RBP1.82□□□□□ -2.12
YPT52YKR014C YRA1Q12159 226 aaKnown RBP1.82□□□□□ -2.12
YPT52YKR014C TCB3Q03640 1545 aaKnown RBP1.81□□□□□ -2.12
YPT52YKR014C CDC28P00546 298 aaKnown RBP1.81□□□□□ -2.12
YPT52YKR014C DBF2P22204 572 aa1.81□□□□□ -2.12
YPT52YKR014C RPF1P38805 295 aaKnown RBP1.81□□□□□ -2.12
YPT52YKR014C BXI1P48558 297 aa1.81□□□□□ -2.12
YPT52YKR014C CAB4P53332 305 aa1.81□□□□□ -2.12
YPT52YKR014C CUS2P53830 285 aaPredicted RBP1.81□□□□□ -2.12
YPT52YKR014C ABF2Q02486 183 aa1.81□□□□□ -2.12
YPT52YKR014C MRPS17Q03246 237 aaPredicted RBP1.81□□□□□ -2.12
YPT52YKR014C YMR279CQ03263 540 aa1.81□□□□□ -2.12
YPT52YKR014C YMD8Q03697 442 aa1.81□□□□□ -2.12
YPT52YKR014C GET4Q12125 312 aa1.81□□□□□ -2.12
YPT52YKR014C LSO2Q3E772 92 aaKnown RBP1.81□□□□□ -2.12
YPT52YKR014C TY1B-DR4Q07793 1604 aa1.8□□□□□ -2.12
YPT52YKR014C YHR139C-AO13536 103 aa1.8□□□□□ -2.12
YPT52YKR014C HTB1P02293 131 aaKnown RBP1.8□□□□□ -2.12
YPT52YKR014C HTB2P02294 131 aa1.8□□□□□ -2.12
YPT52YKR014C Q0255P03881 472 aa1.8□□□□□ -2.12
YPT52YKR014C YHR032W-AP0C5N6 59 aa1.8□□□□□ -2.12
YPT52YKR014C MATALPHA2P0CY08 210 aa1.8□□□□□ -2.12
YPT52YKR014C HMLALPHA2P0CY09 210 aa1.8□□□□□ -2.12
YPT52YKR014C FCY2P17064 533 aa1.8□□□□□ -2.12
YPT52YKR014C CBF1P17106 351 aa1.8□□□□□ -2.12
YPT52YKR014C MGM101P32787 269 aaKnown RBP1.8□□□□□ -2.12
YPT52YKR014C APS1P35181 156 aa1.8□□□□□ -2.12
YPT52YKR014C TAF14P35189 244 aa1.8□□□□□ -2.12
YPT52YKR014C RPA43P46669 326 aa1.8□□□□□ -2.12
YPT52YKR014C PRM8P53174 237 aa1.8□□□□□ -2.12
YPT52YKR014C YGR026WP53217 278 aa1.8□□□□□ -2.12
YPT52YKR014C YDR248CQ03786 193 aa1.8□□□□□ -2.12
YPT52YKR014C ATG39Q06159 398 aa1.8□□□□□ -2.12
YPT52YKR014C CCA1P21269 546 aa1.79□□□□□ -2.12
YPT52YKR014C OAC1P32332 324 aa1.79□□□□□ -2.12
YPT52YKR014C YBR063CP38083 404 aa1.79□□□□□ -2.12
YPT52YKR014C GRE3P38715 327 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
YPT52YKR014C DOG2P38773 246 aa1.79□□□□□ -2.12
YPT52YKR014C DOG1P38774 246 aa1.79□□□□□ -2.12
YPT52YKR014C IKI1P38874 309 aa1.79□□□□□ -2.12
YPT52YKR014C AKR2Q12013 749 aa1.79□□□□□ -2.12
YPT52YKR014C SWR1Q05471 1514 aa1.78□□□□□ -2.12
YPT52YKR014C TUS1Q06412 1307 aa1.78□□□□□ -2.12
YPT52YKR014C JIP3O13555 125 aa1.78□□□□□ -2.12
YPT52YKR014C YPR170W-BP0C5R9 85 aa1.78□□□□□ -2.12
YPT52YKR014C RFA3P26755 122 aaKnown RBP1.78□□□□□ -2.12
YPT52YKR014C SPS18P32572 300 aa1.78□□□□□ -2.12
YPT52YKR014C ECM33P38248 429 aaKnown RBP1.78□□□□□ -2.12
YPT52YKR014C FAR7P43592 221 aa1.78□□□□□ -2.12
YPT52YKR014C IRC18P47056 224 aa1.78□□□□□ -2.12
YPT52YKR014C SNX4P47057 423 aa1.78□□□□□ -2.12
YPT52YKR014C GET1P53192 235 aa1.78□□□□□ -2.12
YPT52YKR014C PDR17P53844 350 aa1.78□□□□□ -2.12
YPT52YKR014C YHR086W-AQ3E746 53 aa1.78□□□□□ -2.12
YPT52YKR014C YPK2P18961 677 aa1.77□□□□□ -2.13
YPT52YKR014C SCM4P32564 187 aa1.77□□□□□ -2.13
YPT52YKR014C VMA11P32842 164 aa1.77□□□□□ -2.13
YPT52YKR014C YCR087C-AP37263 153 aa1.77□□□□□ -2.13
YPT52YKR014C RSM25P40496 264 aa1.77□□□□□ -2.13
YPT52YKR014C SMD3P43321 101 aaKnown RBP1.77□□□□□ -2.13
YPT52YKR014C GIM3P53900 129 aa1.77□□□□□ -2.13
YPT52YKR014C DID2P69771 204 aa1.77□□□□□ -2.13
YPT52YKR014C ABP140Q08641 628 aaKnown RBP1.77□□□□□ -2.13
YPT52YKR014C MHT1Q12525 324 aa1.77□□□□□ -2.13
YPT52YKR014C KOG1P38873 1557 aa1.76□□□□□ -2.13
YPT52YKR014C RPL9AP05738 191 aaKnown RBP1.76□□□□□ -2.13
YPT52YKR014C RPL27AP0C2H6 136 aaKnown RBP1.76□□□□□ -2.13
YPT52YKR014C RPL27BP0C2H7 136 aaKnown RBP1.76□□□□□ -2.13
YPT52YKR014C GCN3P14741 305 aa1.76□□□□□ -2.13
YPT52YKR014C ATG22P25568 528 aa1.76□□□□□ -2.13
YPT52YKR014C YOR062CP36025 268 aa1.76□□□□□ -2.13
YPT52YKR014C IRC22P40006 225 aa1.76□□□□□ -2.13
YPT52YKR014C BMT5P40493 336 aa1.76□□□□□ -2.13
YPT52YKR014C YIL001WP40560 513 aa1.76□□□□□ -2.13
YPT52YKR014C RPL9BP51401 191 aaKnown RBP1.76□□□□□ -2.13
YPT52YKR014C NOP19P53317 196 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms