RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C GOS1P38736 223 aa1.97□□□□□ -2.09
CTK2YJL006C YHB1P39676 399 aaKnown RBP1.97□□□□□ -2.09
CTK2YJL006C FMC1P40491 155 aa1.97□□□□□ -2.09
CTK2YJL006C BNA6P43619 295 aa1.97□□□□□ -2.09
CTK2YJL006C YNL134CP53912 376 aaKnown RBP1.97□□□□□ -2.09
CTK2YJL006C CWC21Q03375 135 aaKnown RBP1.97□□□□□ -2.09
CTK2YJL006C SPG4Q04438 115 aa1.97□□□□□ -2.09
CTK2YJL006C YLR179CQ06252 201 aaKnown RBP1.97□□□□□ -2.09
CTK2YJL006C CSM4Q08955 156 aa1.97□□□□□ -2.09
CTK2YJL006C STU1P38198 1513 aa1.96□□□□□ -2.09
CTK2YJL006C MMS22Q06164 1454 aa1.96□□□□□ -2.1
CTK2YJL006C NTG1P31378 399 aa1.96□□□□□ -2.1
CTK2YJL006C SGE1P33335 543 aa1.96□□□□□ -2.1
CTK2YJL006C MRPL39P36533 70 aa1.96□□□□□ -2.1
CTK2YJL006C TCD1P38756 429 aa1.96□□□□□ -2.1
CTK2YJL006C FCY21P40039 528 aa1.96□□□□□ -2.1
CTK2YJL006C SNX4P47057 423 aa1.96□□□□□ -2.1
CTK2YJL006C USE1P53146 245 aa1.96□□□□□ -2.1
CTK2YJL006C YOR186WQ08560 144 aa1.96□□□□□ -2.1
CTK2YJL006C RRS1Q08746 203 aaKnown RBP1.96□□□□□ -2.1
CTK2YJL006C MSH5Q12175 901 aa1.96□□□□□ -2.1
CTK2YJL006C YCT1Q12235 531 aa1.96□□□□□ -2.1
CTK2YJL006C YOR029WQ12243 111 aa1.96□□□□□ -2.1
CTK2YJL006C BBP1Q12365 385 aa1.96□□□□□ -2.1
CTK2YJL006C IQG1Q12280 1495 aa1.95□□□□□ -2.1
CTK2YJL006C SWI1P09547 1314 aa1.95□□□□□ -2.1
CTK2YJL006C SRB8P25648 1427 aa1.95□□□□□ -2.1
CTK2YJL006C PDR11P40550 1411 aa1.95□□□□□ -2.1
CTK2YJL006C MSN4P33749 630 aa1.95□□□□□ -2.1
CTK2YJL006C BFR1P38934 470 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1 RIP-Chip
CTK2YJL006C ARC15P40518 154 aaRIP-Chip data1.95□□□□□ -2.1not detected
CTK2YJL006C GCN20P43535 752 aaKnown RBP1.95□□□□□ -2.1
CTK2YJL006C MRPL50P53724 139 aa1.95□□□□□ -2.1
CTK2YJL006C RRP40Q08285 240 aaKnown RBP1.95□□□□□ -2.1
CTK2YJL006C VMR1P38735 1592 aa1.94□□□□□ -2.1
CTK2YJL006C Q0255P03881 472 aa1.94□□□□□ -2.1
CTK2YJL006C SRB4P32569 687 aa1.94□□□□□ -2.1
CTK2YJL006C BMH2P34730 273 aaKnown RBP1.94□□□□□ -2.1
CTK2YJL006C YJL027CP47063 138 aaPredicted RBP1.94□□□□□ -2.1
CTK2YJL006C FAR8Q05040 523 aa1.94□□□□□ -2.1
CTK2YJL006C PAM18Q07914 168 aa1.94□□□□□ -2.1
CTK2YJL006C SNU23Q12368 194 aaPredicted RBP1.94□□□□□ -2.1
CTK2YJL006C MHT1Q12525 324 aa1.94□□□□□ -2.1
CTK2YJL006C TY1B-DR3Q99231 1755 aa1.94□□□□□ -2.1
CTK2YJL006C ACC1Q00955 2233 aaKnown RBP1.94□□□□□ -2.1
CTK2YJL006C PUT1P09368 476 aa1.93□□□□□ -2.1
CTK2YJL006C YCR016WP25617 290 aaKnown RBP1.93□□□□□ -2.1
CTK2YJL006C DOA4P32571 926 aa1.93□□□□□ -2.1
CTK2YJL006C MSA2P36157 363 aa1.93□□□□□ -2.1
CTK2YJL006C YHR125WP38831 101 aa1.93□□□□□ -2.1
CTK2YJL006C YER085CP40058 173 aa1.93□□□□□ -2.1
CTK2YJL006C SMD3P43321 101 aaKnown RBP1.93□□□□□ -2.1
CTK2YJL006C YGL159WP53110 370 aa1.93□□□□□ -2.1
CTK2YJL006C GRX3Q03835 250 aa1.93□□□□□ -2.1
CTK2YJL006C YLR283WQ05867 314 aa1.93□□□□□ -2.1
CTK2YJL006C YLR030WQ07967 263 aa1.93□□□□□ -2.1
CTK2YJL006C ATG31Q12421 196 aa1.93□□□□□ -2.1
CTK2YJL006C YHR086W-AQ3E746 53 aa1.93□□□□□ -2.1
CTK2YJL006C CFT1Q06632 1357 aaKnown RBP1.93□□□□□ -2.1
CTK2YJL006C MLP2P40457 1679 aa1.93□□□□□ -2.1
CTK2YJL006C CAT8P39113 1433 aa1.92□□□□□ -2.1
CTK2YJL006C YHR032W-AP0C5N6 59 aa1.92□□□□□ -2.1
CTK2YJL006C RPB4P20433 221 aaPredicted RBP1.92□□□□□ -2.1
CTK2YJL006C YHR127WP38833 243 aaKnown RBP1.92□□□□□ -2.1
CTK2YJL006C RTR1P40084 226 aaPredicted RBP1.92□□□□□ -2.1
CTK2YJL006C YNL046WP53956 172 aa1.92□□□□□ -2.1
CTK2YJL006C RHO3Q00245 231 aaKnown RBP1.92□□□□□ -2.1
CTK2YJL006C YMR279CQ03263 540 aa1.92□□□□□ -2.1
CTK2YJL006C KRE28Q04431 385 aa1.92□□□□□ -2.1
CTK2YJL006C YPR172WQ06608 200 aa1.92□□□□□ -2.1
CTK2YJL006C ERG24P32462 438 aaKnown RBP1.91□□□□□ -2.1
CTK2YJL006C OTU1P43558 301 aa1.91□□□□□ -2.1
CTK2YJL006C YJR079WP47126 109 aa1.91□□□□□ -2.1
CTK2YJL006C JHD2P47156 728 aaPredicted RBP1.91□□□□□ -2.1
CTK2YJL006C YGR026WP53217 278 aa1.91□□□□□ -2.1
CTK2YJL006C GTR2P53290 341 aa1.91□□□□□ -2.1
CTK2YJL006C PRM15Q03262 622 aa1.91□□□□□ -2.1
CTK2YJL006C INM2Q05533 292 aa1.91□□□□□ -2.1
CTK2YJL006C RSF2P46974 1380 aa1.9□□□□□ -2.11
CTK2YJL006C COX5AP00424 153 aa1.9□□□□□ -2.11
CTK2YJL006C YKT6P36015 200 aaKnown RBP1.9□□□□□ -2.11
CTK2YJL006C YKL075CP36083 450 aa1.9□□□□□ -2.11
CTK2YJL006C LDB7P38210 180 aa1.9□□□□□ -2.11
CTK2YJL006C MSS2P40990 351 aa1.9□□□□□ -2.11
CTK2YJL006C HOC1P47124 396 aa1.9□□□□□ -2.11
CTK2YJL006C RMR1P53060 241 aa1.9□□□□□ -2.11
CTK2YJL006C PGA2P53903 129 aa1.9□□□□□ -2.11
CTK2YJL006C DAD3P69850 94 aa1.9□□□□□ -2.11
CTK2YJL006C SEI1Q06058 285 aa1.9□□□□□ -2.11
CTK2YJL006C YPL257WQ08974 193 aa1.9□□□□□ -2.11
CTK2YJL006C AKR2Q12013 749 aa1.9□□□□□ -2.11
CTK2YJL006C TSC11P40061 1430 aa1.9□□□□□ -2.11
CTK2YJL006C IPP1P00817 287 aaKnown RBP1.89□□□□□ -2.11
CTK2YJL006C ADH3P07246 375 aaKnown RBP1.89□□□□□ -2.11
CTK2YJL006C TCP1P12612 559 aaKnown RBP1.89□□□□□ -2.11
CTK2YJL006C ERD2P18414 219 aa1.89□□□□□ -2.11
CTK2YJL006C RPL24BP24000 155 aaKnown RBP1.89□□□□□ -2.11
CTK2YJL006C DOG1P38774 246 aa1.89□□□□□ -2.11
CTK2YJL006C CTR2P38865 189 aa1.89□□□□□ -2.11
CTK2YJL006C BAT2P47176 376 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms