RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W TDH3P00359 332 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
UFD1YGR048W PAI3P01094 68 aa7.2□□□□□ -1.26
UFD1YGR048W DCG1P32460 244 aa7.2□□□□□ -1.26
UFD1YGR048W PRP18P33411 251 aaPredicted RBP7.2□□□□□ -1.26
UFD1YGR048W MIX23P38162 196 aa7.2□□□□□ -1.26
UFD1YGR048W YHL041WP38730 149 aa7.2□□□□□ -1.26
UFD1YGR048W HSP10P38910 106 aa7.2□□□□□ -1.26
UFD1YGR048W PEX7P39108 375 aa7.2□□□□□ -1.26
UFD1YGR048W SDP1P40479 209 aa7.2□□□□□ -1.26
UFD1YGR048W YIL060WP40519 144 aa7.2□□□□□ -1.26
UFD1YGR048W IKS1P47042 667 aa7.2□□□□□ -1.26
UFD1YGR048W YJR120WP47157 116 aa7.2□□□□□ -1.26
UFD1YGR048W CDD1Q06549 142 aa7.2□□□□□ -1.26
UFD1YGR048W NDD1Q08887 554 aa7.2□□□□□ -1.26
UFD1YGR048W ERV2Q12284 196 aa7.2□□□□□ -1.26
UFD1YGR048W TIR1P10863 254 aa7.19□□□□□ -1.26
UFD1YGR048W TRR1P29509 319 aaKnown RBP7.19□□□□□ -1.26
UFD1YGR048W PRO1P32264 428 aa7.19□□□□□ -1.26
UFD1YGR048W LSM2P38203 95 aaKnown RBP7.19□□□□□ -1.26
UFD1YGR048W DOG1P38774 246 aa7.19□□□□□ -1.26
UFD1YGR048W SNU13P39990 126 aaKnown RBP7.19□□□□□ -1.26
UFD1YGR048W OTU1P43558 301 aa7.19□□□□□ -1.26
UFD1YGR048W TEX1P53851 422 aaKnown RBP7.19□□□□□ -1.26
UFD1YGR048W YNL184CP53876 108 aa7.19□□□□□ -1.26
UFD1YGR048W RNH201P53942 307 aa7.19□□□□□ -1.26
UFD1YGR048W CCE1Q03702 353 aa7.19□□□□□ -1.26
UFD1YGR048W MTQ2Q03920 221 aaPredicted RBP7.19□□□□□ -1.26
UFD1YGR048W DAL4Q04895 635 aa7.19□□□□□ -1.26
UFD1YGR048W MRX8Q05473 314 aa7.19□□□□□ -1.26
UFD1YGR048W NMA1Q06178 401 aaKnown RBP7.19□□□□□ -1.26
UFD1YGR048W NUT2Q06213 157 aa7.19□□□□□ -1.26
UFD1YGR048W ISA2Q12425 185 aa7.19□□□□□ -1.26
UFD1YGR048W YLR149CQ99296 730 aa7.19□□□□□ -1.26
UFD1YGR048W HIP1P06775 603 aa7.18□□□□□ -1.26
UFD1YGR048W CHO1P08456 276 aa7.18□□□□□ -1.26
UFD1YGR048W YCR007CP25354 239 aa7.18□□□□□ -1.26
UFD1YGR048W MRP49P32388 137 aa7.18□□□□□ -1.26
UFD1YGR048W FMT1P32785 401 aa7.18□□□□□ -1.26
UFD1YGR048W UPS2P35200 230 aa7.18□□□□□ -1.26
UFD1YGR048W YIL067CP40514 678 aa7.18□□□□□ -1.26
UFD1YGR048W NAS2P40555 220 aa7.18□□□□□ -1.26
UFD1YGR048W YJR124CP47159 448 aa7.18□□□□□ -1.26
UFD1YGR048W MTM1P53320 366 aa7.18□□□□□ -1.26
UFD1YGR048W YNR061CP53747 219 aa7.18□□□□□ -1.26
UFD1YGR048W HHT1P61830 136 aa7.18□□□□□ -1.26
UFD1YGR048W LOA1Q06508 300 aa7.18□□□□□ -1.26
UFD1YGR048W TAZ1Q06510 381 aa7.18□□□□□ -1.26
UFD1YGR048W BSC6Q08280 497 aa7.18□□□□□ -1.26
UFD1YGR048W YDL157CQ12082 118 aa7.18□□□□□ -1.26
UFD1YGR048W MSL5Q12186 476 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
UFD1YGR048W FRE8Q12209 686 aa7.18□□□□□ -1.26
UFD1YGR048W MSF1P08425 469 aa7.17□□□□□ -1.26
UFD1YGR048W URK1P27515 501 aa7.17□□□□□ -1.26
UFD1YGR048W MTR2P34232 184 aaKnown RBP7.17□□□□□ -1.26
UFD1YGR048W SLM6P38343 150 aa7.17□□□□□ -1.26
UFD1YGR048W YBR292CP38357 123 aa7.17□□□□□ -1.26
UFD1YGR048W YEA6P39953 335 aa7.17□□□□□ -1.26
UFD1YGR048W YEA4P40004 342 aa7.17□□□□□ -1.26
UFD1YGR048W YIL012WP40551 113 aa7.17□□□□□ -1.26
UFD1YGR048W IST3P40565 148 aaPredicted RBP7.17□□□□□ -1.26
UFD1YGR048W SMD3P43321 101 aaKnown RBP7.17□□□□□ -1.26
UFD1YGR048W CIN2P46670 268 aa7.17□□□□□ -1.26
UFD1YGR048W UBP8P50102 471 aa7.17□□□□□ -1.26
UFD1YGR048W YGR015CP53208 328 aa7.17□□□□□ -1.26
UFD1YGR048W YNL140CP53910 189 aa7.17□□□□□ -1.26
UFD1YGR048W EOS1P53938 366 aa7.17□□□□□ -1.26
UFD1YGR048W ELC1Q03071 99 aa7.17□□□□□ -1.26
UFD1YGR048W MSC2Q03455 724 aa7.17□□□□□ -1.26
UFD1YGR048W YMR166CQ03829 368 aa7.17□□□□□ -1.26
UFD1YGR048W THI74Q04083 370 aa7.17□□□□□ -1.26
UFD1YGR048W HRI1Q05905 244 aaKnown RBP7.17□□□□□ -1.26
UFD1YGR048W YOR015WQ12169 119 aa7.17□□□□□ -1.26
UFD1YGR048W TPT1Q12272 230 aaKnown RBP7.17□□□□□ -1.26
UFD1YGR048W YDL007C-AQ2V2Q0 85 aa7.17□□□□□ -1.26
UFD1YGR048W OCH1P31755 480 aa7.16□□□□□ -1.26
UFD1YGR048W PAU16P35994 123 aa7.16□□□□□ -1.26
UFD1YGR048W MCR1P36060 302 aaKnown RBP7.16□□□□□ -1.26
UFD1YGR048W YBR071WP38243 211 aa7.16□□□□□ -1.26
UFD1YGR048W RPL13BP40212 199 aaKnown RBP7.16□□□□□ -1.26
UFD1YGR048W SMK1P41808 388 aa7.16□□□□□ -1.26
UFD1YGR048W BAT2P47176 376 aaKnown RBP7.16□□□□□ -1.26
UFD1YGR048W SKO1Q02100 647 aa7.16□□□□□ -1.26
UFD1YGR048W YML053CQ04978 212 aa7.16□□□□□ -1.26
UFD1YGR048W YLR036CQ07986 203 aa7.16□□□□□ -1.26
UFD1YGR048W DCI1Q08558 271 aa7.16□□□□□ -1.26
UFD1YGR048W RML2P32611 393 aa7.15□□□□□ -1.26
UFD1YGR048W EMP70P32802 667 aa7.15□□□□□ -1.26
UFD1YGR048W GEX2P36173 615 aa7.15□□□□□ -1.26
UFD1YGR048W RPA43P46669 326 aa7.15□□□□□ -1.26
UFD1YGR048W SPG3Q04398 127 aaPredicted RBP7.15□□□□□ -1.26
UFD1YGR048W SYM1Q06563 197 aa7.15□□□□□ -1.26
UFD1YGR048W SUL2Q12325 893 aa7.15□□□□□ -1.26
UFD1YGR048W DPM1P14020 267 aaKnown RBP7.14□□□□□ -1.27
UFD1YGR048W MIH1P23748 554 aa7.14□□□□□ -1.27
UFD1YGR048W YOX1P34161 385 aa7.14□□□□□ -1.27
UFD1YGR048W YUH1P35127 236 aa7.14□□□□□ -1.27
UFD1YGR048W UMP1P38293 148 aa7.14□□□□□ -1.27
UFD1YGR048W YPT35P38815 214 aaKnown RBP7.14□□□□□ -1.27
UFD1YGR048W JHD1P40034 492 aa7.14□□□□□ -1.27
UFD1YGR048W GTS1P40956 396 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms