RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W ELP6Q04868 273 aa2.94□□□□□ -1.94
USE1YGL098W YPR114WQ06107 315 aa2.94□□□□□ -1.94
USE1YGL098W BSC6Q08280 497 aa2.94□□□□□ -1.94
USE1YGL098W RPS10AQ08745 105 aaPredicted RBP2.94□□□□□ -1.94
USE1YGL098W TGS1Q12052 315 aa2.94□□□□□ -1.94
USE1YGL098W RDL1Q12305 139 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W PRR2Q12310 699 aa2.94□□□□□ -1.94
USE1YGL098W SUL2Q12325 893 aa2.94□□□□□ -1.94
USE1YGL098W ICT1Q12385 394 aa2.94□□□□□ -1.94
USE1YGL098W FOL3Q12676 427 aaPredicted RBP2.94□□□□□ -1.94
USE1YGL098W YCL012CQ8J0M4 134 aa2.94□□□□□ -1.94
USE1YGL098W FLO1P32768 1537 aa2.93□□□□□ -1.94
USE1YGL098W RIF1P29539 1916 aa2.93□□□□□ -1.94
USE1YGL098W YLR358CO13565 187 aa2.93□□□□□ -1.94
USE1YGL098W TDH3P00359 332 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
USE1YGL098W SOD2P00447 233 aa2.93□□□□□ -1.94
USE1YGL098W MES1P00958 751 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W RPS9BP05755 195 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W CDC36P06100 191 aaPredicted RBP2.93□□□□□ -1.94
USE1YGL098W QCR2P07257 368 aa2.93□□□□□ -1.94
USE1YGL098W RPL35AP0CX84 120 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W RPL35BP0CX85 120 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W LRE1P25579 583 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W CNE1P27825 502 aa2.93□□□□□ -1.94
USE1YGL098W DCG1P32460 244 aa2.93□□□□□ -1.94
USE1YGL098W AIM26P32858 118 aa2.93□□□□□ -1.94
USE1YGL098W MNS1P32906 549 aa2.93□□□□□ -1.94
USE1YGL098W PPZ2P33329 710 aa2.93□□□□□ -1.94
USE1YGL098W PAU16P35994 123 aa2.93□□□□□ -1.94
USE1YGL098W AGP2P38090 596 aa2.93□□□□□ -1.94
USE1YGL098W THI2P38141 450 aa2.93□□□□□ -1.94
USE1YGL098W YHL041WP38730 149 aa2.93□□□□□ -1.94
USE1YGL098W RPB11P38902 120 aa2.93□□□□□ -1.94
USE1YGL098W HMF1P40037 129 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W DLS1P40366 167 aa2.93□□□□□ -1.94
USE1YGL098W NAS2P40555 220 aa2.93□□□□□ -1.94
USE1YGL098W SMK1P41808 388 aa2.93□□□□□ -1.94
USE1YGL098W POP1P41812 875 aa2.93□□□□□ -1.94
USE1YGL098W PAM16P42949 149 aa2.93□□□□□ -1.94
USE1YGL098W SMD3P43321 101 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W ATG27P46989 271 aa2.93□□□□□ -1.94
USE1YGL098W RMD9P53140 646 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W YGR066CP53242 292 aa2.93□□□□□ -1.94
USE1YGL098W YNL184CP53876 108 aa2.93□□□□□ -1.94
USE1YGL098W RNH201P53942 307 aa2.93□□□□□ -1.94
USE1YGL098W APS2Q00381 147 aa2.93□□□□□ -1.94
USE1YGL098W YML079WQ03629 201 aa2.93□□□□□ -1.94
USE1YGL098W MTQ2Q03920 221 aaPredicted RBP2.93□□□□□ -1.94
USE1YGL098W YMR074CQ04773 145 aa2.93□□□□□ -1.94
USE1YGL098W YMR252CQ04814 134 aa2.93□□□□□ -1.94
USE1YGL098W GRX8Q05926 109 aa2.93□□□□□ -1.94
USE1YGL098W TAZ1Q06510 381 aa2.93□□□□□ -1.94
USE1YGL098W RRT7Q07829 113 aa2.93□□□□□ -1.94
USE1YGL098W YOL024WQ08172 172 aa2.93□□□□□ -1.94
USE1YGL098W MRH1Q12117 320 aaPredicted RBP2.93□□□□□ -1.94
USE1YGL098W BSC1Q12140 328 aa2.93□□□□□ -1.94
USE1YGL098W YLR050CQ12155 161 aaKnown RBP2.93□□□□□ -1.94
USE1YGL098W UBR1P19812 1950 aa2.92□□□□□ -1.94
USE1YGL098W MBF1O14467 151 aaKnown RBP2.92□□□□□ -1.94
USE1YGL098W YPT1P01123 206 aaKnown RBP2.92□□□□□ -1.94
USE1YGL098W COX9P07255 59 aa2.92□□□□□ -1.94
USE1YGL098W MSF1P08425 469 aa2.92□□□□□ -1.94
USE1YGL098W MAK32P23060 363 aa2.92□□□□□ -1.94
USE1YGL098W GPI12P23797 304 aa2.92□□□□□ -1.94
USE1YGL098W YCR023CP25351 611 aa2.92□□□□□ -1.94
USE1YGL098W RML2P32611 393 aa2.92□□□□□ -1.94
USE1YGL098W MDL1P33310 695 aa2.92□□□□□ -1.94
USE1YGL098W YKL102CP34249 101 aa2.92□□□□□ -1.94
USE1YGL098W UPS2P35200 230 aa2.92□□□□□ -1.94
USE1YGL098W DRE2P36152 348 aa2.92□□□□□ -1.94
USE1YGL098W VID24P38263 362 aa2.92□□□□□ -1.94
USE1YGL098W PTH1P38876 190 aaKnown RBP2.92□□□□□ -1.94
USE1YGL098W TAT2P38967 592 aa2.92□□□□□ -1.94
USE1YGL098W YEA6P39953 335 aa2.92□□□□□ -1.94
USE1YGL098W EAF5P39995 279 aa2.92□□□□□ -1.94
USE1YGL098W JHD1P40034 492 aa2.92□□□□□ -1.94
USE1YGL098W MOB1P40484 314 aa2.92□□□□□ -1.94
USE1YGL098W CIN2P46670 268 aa2.92□□□□□ -1.94
USE1YGL098W XPT1P47165 209 aa2.92□□□□□ -1.94
USE1YGL098W TTI2P47168 421 aa2.92□□□□□ -1.94
USE1YGL098W HSV2P50079 448 aaPredicted RBP2.92□□□□□ -1.94
USE1YGL098W NPY1P53164 384 aa2.92□□□□□ -1.94
USE1YGL098W COX18P53239 316 aa2.92□□□□□ -1.94
USE1YGL098W YGR250CP53316 781 aaKnown RBP2.92□□□□□ -1.94
USE1YGL098W MTM1P53320 366 aa2.92□□□□□ -1.94
USE1YGL098W YNL140CP53910 189 aa2.92□□□□□ -1.94
USE1YGL098W YNL092WP53934 400 aa2.92□□□□□ -1.94
USE1YGL098W YPL077CQ02831 240 aa2.92□□□□□ -1.94
USE1YGL098W ATG21Q02887 496 aa2.92□□□□□ -1.94
USE1YGL098W ARA2Q04212 335 aa2.92□□□□□ -1.94
USE1YGL098W TRI1Q05024 226 aa2.92□□□□□ -1.94
USE1YGL098W PRP11Q07350 266 aaPredicted RBP2.92□□□□□ -1.94
USE1YGL098W ACK1Q07622 623 aaPredicted RBP2.92□□□□□ -1.94
USE1YGL098W FRE8Q12209 686 aa2.92□□□□□ -1.94
USE1YGL098W YDR262WQ12331 272 aa2.92□□□□□ -1.94
USE1YGL098W GEP5Q12393 293 aa2.92□□□□□ -1.94
USE1YGL098W LAS17Q12446 633 aa2.92□□□□□ -1.94
USE1YGL098W RAX2Q12465 1220 aa2.92□□□□□ -1.94
USE1YGL098W YDL007C-AQ2V2Q0 85 aa2.92□□□□□ -1.94
USE1YGL098W YCR075W-AQ3E830 75 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms