RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeastyeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL040WYFL040W SPG4Q04438 115 aa3.04□□□□□ -1.92
YFL040WYFL040W DXO1Q06349 442 aa3.04□□□□□ -1.92
YFL040WYFL040W YPR147CQ06522 304 aaKnown RBP3.04□□□□□ -1.92
YFL040WYFL040W YRA1Q12159 226 aaKnown RBP3.04□□□□□ -1.92
YFL040WYFL040W YCL012CQ8J0M4 134 aa3.04□□□□□ -1.92
YFL040WYFL040W CBF1P17106 351 aa3.03□□□□□ -1.92
YFL040WYFL040W SRL3P36167 246 aa3.03□□□□□ -1.92
YFL040WYFL040W MRPS9P38120 278 aa3.03□□□□□ -1.92
YFL040WYFL040W ARN2P38724 620 aa3.03□□□□□ -1.92
YFL040WYFL040W YHR127WP38833 243 aaKnown RBP3.03□□□□□ -1.92
YFL040WYFL040W ASP1P38986 381 aaPredicted RBP3.03□□□□□ -1.92
YFL040WYFL040W MIC26P50087 233 aa3.03□□□□□ -1.92
YFL040WYFL040W MGA1P53050 456 aa3.03□□□□□ -1.92
YFL040WYFL040W NIF3P53081 288 aa3.03□□□□□ -1.92
YFL040WYFL040W ORM1P53224 222 aa3.03□□□□□ -1.92
YFL040WYFL040W YNL247WP53852 767 aaKnown RBP3.03□□□□□ -1.92
YFL040WYFL040W SPC24Q04477 213 aa3.03□□□□□ -1.92
YFL040WYFL040W SEI1Q06058 285 aa3.03□□□□□ -1.92
YFL040WYFL040W OCA6Q12454 224 aa3.03□□□□□ -1.92
YFL040WYFL040W YPL229WQ99395 206 aa3.03□□□□□ -1.92
YFL040WYFL040W GDH2P33327 1092 aaKnown RBP3.02□□□□□ -1.93
YFL040WYFL040W PHO89P38361 574 aa3.02□□□□□ -1.93
YFL040WYFL040W YER034WP40022 185 aaKnown RBP3.02□□□□□ -1.93
YFL040WYFL040W TMA22P47089 198 aaPredicted RBP3.02□□□□□ -1.93
YFL040WYFL040W ADO1P47143 340 aaKnown RBP3.02□□□□□ -1.93
YFL040WYFL040W YJR149WP47177 404 aa3.02□□□□□ -1.93
YFL040WYFL040W RBL2P48606 106 aaKnown RBP3.02□□□□□ -1.93
YFL040WYFL040W SWT21P53873 357 aaPredicted RBP3.02□□□□□ -1.93
YFL040WYFL040W PLP1Q04004 230 aa3.02□□□□□ -1.93
YFL040WYFL040W RRP40Q08285 240 aaKnown RBP3.02□□□□□ -1.93
YFL040WYFL040W IES3Q12345 250 aa3.02□□□□□ -1.93
YFL040WYFL040W ATG5Q12380 294 aa3.02□□□□□ -1.93
YFL040WYFL040W UBR2Q07963 1872 aa3.02□□□□□ -1.93
YFL040WYFL040W ERG2P32352 222 aa3.01□□□□□ -1.93
YFL040WYFL040W YRB2P40517 327 aa3.01□□□□□ -1.93
YFL040WYFL040W SYS1P41544 203 aa3.01□□□□□ -1.93
YFL040WYFL040W UFE1P41834 346 aa3.01□□□□□ -1.93
YFL040WYFL040W UFD1P53044 361 aa3.01□□□□□ -1.93
YFL040WYFL040W TOS8P53147 276 aa3.01□□□□□ -1.93
YFL040WYFL040W CAX4P53223 239 aa3.01□□□□□ -1.93
YFL040WYFL040W SLX9P53251 210 aaPredicted RBP3.01□□□□□ -1.93
YFL040WYFL040W AAH1P53909 347 aa3.01□□□□□ -1.93
YFL040WYFL040W YKR005CQ02203 525 aa3.01□□□□□ -1.93
YFL040WYFL040W YPL039WQ03080 316 aa3.01□□□□□ -1.93
YFL040WYFL040W YMR226CQ05016 267 aaKnown RBP3.01□□□□□ -1.93
YFL040WYFL040W DCN1Q12395 269 aa3.01□□□□□ -1.93
YFL040WYFL040W ECM29P38737 1868 aa3.01□□□□□ -1.93
YFL040WYFL040W HTB1P02293 131 aaKnown RBP3.01□□□□□ -1.93
YFL040WYFL040W HTB2P02294 131 aa3.01□□□□□ -1.93
YFL040WYFL040W BCY1P07278 416 aaKnown RBP3.01□□□□□ -1.93
YFL040WYFL040W SNA3P14359 133 aa3.01□□□□□ -1.93
YFL040WYFL040W DPB2P24482 689 aaPredicted RBP3.01□□□□□ -1.93
YFL040WYFL040W RFA3P26755 122 aaKnown RBP3.01□□□□□ -1.93
YFL040WYFL040W CSG2P35206 410 aa3.01□□□□□ -1.93
YFL040WYFL040W BDH1P39714 382 aa3.01□□□□□ -1.93
YFL040WYFL040W FRT2P39734 528 aa3.01□□□□□ -1.93
YFL040WYFL040W YIL054WP40524 105 aa3.01□□□□□ -1.93
YFL040WYFL040W NOP19P53317 196 aaPredicted RBP3.01□□□□□ -1.93
YFL040WYFL040W OSH6Q02201 448 aa3.01□□□□□ -1.93
YFL040WYFL040W FAB1P34756 2278 aa3□□□□□ -1.93
YFL040WYFL040W RPL28P02406 149 aaKnown RBP3□□□□□ -1.93
YFL040WYFL040W PRE7P23724 241 aaKnown RBP3□□□□□ -1.93
YFL040WYFL040W RME1P32338 300 aaKnown RBP3□□□□□ -1.93
YFL040WYFL040W DRE2P36152 348 aa3□□□□□ -1.93
YFL040WYFL040W PRE6P40303 254 aaKnown RBP3□□□□□ -1.93
YFL040WYFL040W YFL012WP43580 148 aa3□□□□□ -1.93
YFL040WYFL040W MRH4P53166 561 aa3□□□□□ -1.93
YFL040WYFL040W YNL046WP53956 172 aa3□□□□□ -1.93
YFL040WYFL040W YML108WQ03759 105 aa3□□□□□ -1.93
YFL040WYFL040W ECM11Q04110 302 aa3□□□□□ -1.93
YFL040WYFL040W PIN3Q06449 215 aa3□□□□□ -1.93
YFL040WYFL040W CLP1Q08685 445 aaPredicted RBP3□□□□□ -1.93
YFL040WYFL040W YDL211CQ12121 372 aa3□□□□□ -1.93
YFL040WYFL040W JLP1Q12358 412 aa3□□□□□ -1.93
YFL040WYFL040W PPH21P23594 369 aa2.99□□□□□ -1.93
YFL040WYFL040W ADE1P27616 306 aa2.99□□□□□ -1.93
YFL040WYFL040W IDH1P28834 360 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
YFL040WYFL040W FES1P38260 290 aa2.99□□□□□ -1.93
YFL040WYFL040W PHO88P38264 188 aaPredicted RBP2.99□□□□□ -1.93
YFL040WYFL040W YHL044WP38727 235 aa2.99□□□□□ -1.93
YFL040WYFL040W MSA1Q08471 629 aa2.99□□□□□ -1.93
YFL040WYFL040W YOR186WQ08560 144 aa2.99□□□□□ -1.93
YFL040WYFL040W YDL012CQ12489 107 aa2.99□□□□□ -1.93
YFL040WYFL040W YBL112CQ3E7Y4 105 aa2.99□□□□□ -1.93
YFL040WYFL040W RPL22AP05749 121 aaKnown RBP2.98□□□□□ -1.93
YFL040WYFL040W SPT3P06844 337 aa2.98□□□□□ -1.93
YFL040WYFL040W RPL40AP0CH08 128 aaKnown RBP2.98□□□□□ -1.93
YFL040WYFL040W RPL40BP0CH09 128 aaKnown RBP2.98□□□□□ -1.93
YFL040WYFL040W SSO1P32867 290 aa2.98□□□□□ -1.93
YFL040WYFL040W SRY1P36007 326 aa2.98□□□□□ -1.93
YFL040WYFL040W IKI1P38874 309 aa2.98□□□□□ -1.93
YFL040WYFL040W RPE1P46969 238 aa2.98□□□□□ -1.93
YFL040WYFL040W MCM22P47167 239 aa2.98□□□□□ -1.93
YFL040WYFL040W NUP57P48837 541 aa2.98□□□□□ -1.93
YFL040WYFL040W FLC3P53121 802 aa2.98□□□□□ -1.93
YFL040WYFL040W HOP2P53187 214 aa2.98□□□□□ -1.93
YFL040WYFL040W EMI1Q04406 187 aa2.98□□□□□ -1.93
YFL040WYFL040W YMR321CQ04898 105 aa2.98□□□□□ -1.93
YFL040WYFL040W NNT1Q05874 261 aa2.98□□□□□ -1.93
YFL040WYFL040W YPR011CQ12251 326 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms