RNA–Protein interactions for RNA: YER135C

YER135C, Transcript of Dubious open reading frame, yeast

Gene YER135C, Length 393 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YER135C	YER135C	TFC1	P32367	649 aa		0.85	□□□□□ -2.27
YER135C	YER135C	FZF1	P32805	299 aa		0.85	□□□□□ -2.27
YER135C	YER135C	TVP38	P36164	337 aa		0.85	□□□□□ -2.27
YER135C	YER135C	ECM33	P38248	429 aa	Known RBP	0.85	□□□□□ -2.27
YER135C	YER135C	TCD1	P38756	429 aa		0.85	□□□□□ -2.27
YER135C	YER135C	CAT5	P41735	233 aa		0.85	□□□□□ -2.27
YER135C	YER135C	YNL046W	P53956	172 aa		0.85	□□□□□ -2.27
YER135C	YER135C	YMR007W	Q03675	126 aa		0.85	□□□□□ -2.27
YER135C	YER135C	SDO1	Q07953	250 aa	Known RBP	0.85	□□□□□ -2.27
YER135C	YER135C	ERD2	P18414	219 aa		0.84	□□□□□ -2.27
YER135C	YER135C	NUP57	P48837	541 aa		0.84	□□□□□ -2.27
YER135C	YER135C	DID2	P69771	204 aa		0.84	□□□□□ -2.27
YER135C	YER135C	SEI1	Q06058	285 aa		0.84	□□□□□ -2.27
YER135C	YER135C	ANT1	Q06497	328 aa		0.84	□□□□□ -2.27
YER135C	YER135C	YDL180W	Q12301	547 aa		0.84	□□□□□ -2.27
YER135C	YER135C	POL30	P15873	258 aa	Known RBP	0.83	□□□□□ -2.28
YER135C	YER135C	OM45	P16547	393 aa		0.83	□□□□□ -2.28
YER135C	YER135C	YET1	P35723	206 aa		0.83	□□□□□ -2.28
YER135C	YER135C	RIB1	P38066	345 aa		0.83	□□□□□ -2.28
YER135C	YER135C	RPA43	P46669	326 aa		0.83	□□□□□ -2.28
YER135C	YER135C	AIF1	P52923	378 aa		0.83	□□□□□ -2.28
YER135C	YER135C	KRE28	Q04431	385 aa		0.83	□□□□□ -2.28
YER135C	YER135C	MSF1	P08425	469 aa		0.82	□□□□□ -2.28
YER135C	YER135C	CUE1	P38428	203 aa		0.82	□□□□□ -2.28
YER135C	YER135C	BIG1	P38813	335 aa		0.82	□□□□□ -2.28
YER135C	YER135C	GLG2	P47011	380 aa		0.82	□□□□□ -2.28
YER135C	YER135C	BOL2	P53082	120 aa		0.82	□□□□□ -2.28
YER135C	YER135C	UBC7	Q02159	165 aa		0.82	□□□□□ -2.28
YER135C	YER135C	CYR1	P08678	2026 aa	Known RBP	0.81	□□□□□ -2.28
YER135C	YER135C	RPL27B	P0C2H7	136 aa	Known RBP	0.81	□□□□□ -2.28
YER135C	YER135C	EHD3	P28817	500 aa		0.81	□□□□□ -2.28
YER135C	YER135C	SNC2	P33328	115 aa		0.81	□□□□□ -2.28
YER135C	YER135C	YBR096W	P38256	230 aa		0.81	□□□□□ -2.28
YER135C	YER135C	YBR209W	P38311	105 aa		0.81	□□□□□ -2.28
YER135C	YER135C	RIO2	P40160	425 aa	Known RBP	0.81	□□□□□ -2.28
YER135C	YER135C	MPA43	P53583	542 aa	Predicted RBP	0.81	□□□□□ -2.28
YER135C	YER135C	CUS2	P53830	285 aa	Predicted RBP	0.81	□□□□□ -2.28
YER135C	YER135C	YDR248C	Q03786	193 aa		0.81	□□□□□ -2.28
YER135C	YER135C	YPR170W-B	P0C5R9	85 aa		0.8	□□□□□ -2.28
YER135C	YER135C	ATG22	P25568	528 aa		0.8	□□□□□ -2.28
YER135C	YER135C	KDX1	P36005	433 aa		0.8	□□□□□ -2.28
YER135C	YER135C	YKL075C	P36083	450 aa		0.8	□□□□□ -2.28
YER135C	YER135C	SKG1	P36169	355 aa		0.8	□□□□□ -2.28
YER135C	YER135C	MRPL28	P36527	147 aa		0.8	□□□□□ -2.28
YER135C	YER135C	UMP1	P38293	148 aa		0.8	□□□□□ -2.28
YER135C	YER135C	DOG2	P38773	246 aa		0.8	□□□□□ -2.28
YER135C	YER135C	GAA1	P39012	614 aa		0.8	□□□□□ -2.28
YER135C	YER135C	MCM22	P47167	239 aa		0.8	□□□□□ -2.28
YER135C	YER135C	SNZ1	Q03148	297 aa		0.8	□□□□□ -2.28
YER135C	YER135C	MSH5	Q12175	901 aa		0.8	□□□□□ -2.28
YER135C	YER135C	PSF1	Q12488	208 aa		0.8	□□□□□ -2.28
YER135C	YER135C	YER076C	P40049	302 aa		0.79	□□□□□ -2.28
YER135C	YER135C	ERJ5	P43613	295 aa	Predicted RBP	0.79	□□□□□ -2.28
YER135C	YER135C	YNL010W	P53981	241 aa	Known RBP	0.79	□□□□□ -2.28
YER135C	YER135C	PAM18	Q07914	168 aa		0.79	□□□□□ -2.28
YER135C	YER135C	YLR126C	Q12288	251 aa		0.79	□□□□□ -2.28
YER135C	YER135C	MED4	Q12343	284 aa		0.79	□□□□□ -2.28
YER135C	YER135C	TSC3	Q3E790	80 aa		0.79	□□□□□ -2.28
YER135C	YER135C	DRS2	P39524	1355 aa		0.79	□□□□□ -2.28
YER135C	YER135C	MRPL25	P23369	157 aa		0.78	□□□□□ -2.28
YER135C	YER135C	SRB4	P32569	687 aa		0.78	□□□□□ -2.28
YER135C	YER135C	DOC1	P53068	250 aa		0.78	□□□□□ -2.28
YER135C	YER135C	NSA1	P53136	463 aa	Predicted RBP	0.78	□□□□□ -2.28
YER135C	YER135C	POP4	P38336	279 aa		0.77	□□□□□ -2.29
YER135C	YER135C	BNA6	P43619	295 aa		0.77	□□□□□ -2.29
YER135C	YER135C	NUP84	P52891	726 aa		0.77	□□□□□ -2.29
YER135C	YER135C	PRM8	P53174	237 aa		0.77	□□□□□ -2.29
YER135C	YER135C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
YER135C	YER135C	RCE1	Q03530	315 aa		0.77	□□□□□ -2.29
YER135C	YER135C	LPP1	Q04396	274 aa		0.77	□□□□□ -2.29
YER135C	YER135C	YOL107W	Q12239	342 aa		0.77	□□□□□ -2.29
YER135C	YER135C	YNL146C-A	Q3E7Z1	64 aa		0.77	□□□□□ -2.29
YER135C	YER135C	MSB2	P32334	1306 aa		0.76	□□□□□ -2.29
YER135C	YER135C	TUS1	Q06412	1307 aa		0.76	□□□□□ -2.29
YER135C	YER135C	REP2	P03872	296 aa		0.76	□□□□□ -2.29
YER135C	YER135C	RPS5	P26783	225 aa	Known RBP	0.76	□□□□□ -2.29
YER135C	YER135C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.76	□□□□□ -2.29	not detected
YER135C	YER135C	ECM4	P36156	370 aa		0.76	□□□□□ -2.29
YER135C	YER135C	EDC3	P39998	551 aa	Known RBP	0.76	□□□□□ -2.29
YER135C	YER135C	PRE6	P40303	254 aa	Known RBP	0.76	□□□□□ -2.29
YER135C	YER135C	RPL37A	P49166	88 aa	Known RBP	0.76	□□□□□ -2.29
YER135C	YER135C	KAP95	Q06142	861 aa	Known RBP	0.76	□□□□□ -2.29
YER135C	YER135C	MSA1	Q08471	629 aa		0.76	□□□□□ -2.29
YER135C	YER135C	SSO1	P32867	290 aa		0.75	□□□□□ -2.29
YER135C	YER135C	SIP3	P38717	1229 aa		0.75	□□□□□ -2.29
YER135C	YER135C	COX15	P40086	486 aa		0.75	□□□□□ -2.29
YER135C	YER135C	PEX17	P40155	199 aa		0.75	□□□□□ -2.29
YER135C	YER135C	YRB2	P40517	327 aa		0.75	□□□□□ -2.29
YER135C	YER135C	HOC1	P47124	396 aa		0.75	□□□□□ -2.29
YER135C	YER135C	SWP1	Q02795	286 aa		0.75	□□□□□ -2.29
YER135C	YER135C	GAS3	Q03655	524 aa		0.75	□□□□□ -2.29
YER135C	YER135C	YLR173W	Q06247	608 aa		0.75	□□□□□ -2.29
YER135C	YER135C	YHR007C-A	Q07074	71 aa		0.75	□□□□□ -2.29
YER135C	YER135C	FSF1	Q12029	327 aa	Known RBP	0.75	□□□□□ -2.29
YER135C	YER135C	YOR029W	Q12243	111 aa		0.75	□□□□□ -2.29
YER135C	YER135C	ATG40	Q99325	256 aa		0.75	□□□□□ -2.29
YER135C	YER135C	SPT3	P06844	337 aa		0.74	□□□□□ -2.29
YER135C	YER135C	BCY1	P07278	416 aa	Known RBP	0.74	□□□□□ -2.29
YER135C	YER135C	YUH1	P35127	236 aa		0.74	□□□□□ -2.29
YER135C	YER135C	OPY1	P38271	328 aa		0.74	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms